Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00679 and BL01852
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence dna-align/BSNT_00679___ycnB.1.5803.seq
# -bsequence dna-align/BL01852___ycnB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00679___ycnB-BL01852___ycnB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00679___ycnB-BL01852___ycnB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00679___ycnB
# 2: BL01852___ycnB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1465
# Identity: 1052/1465 (71.8%)
# Similarity: 1052/1465 (71.8%)
# Gaps: 89/1465 ( 6.1%)
# Score: 3511.0
#
#
#=======================================
BSNT_00679___ 1 TTGAACACAAGTATTGAACAAAAACCTTTTAACCGTTCTGTCATTGTCGG 50
.|||..|||.|.|.|||||||.|..|.|..|||.|...|.||||.||.||
BL01852___ycn 1 ATGAGTACAGGAACTGAACAACAGACATACAACAGAAATATCATCGTAGG 50
BSNT_00679___ 51 CATTTTG-TTA--GCCGGAGCGTTTGTGGCGATTTTGAACCAGACATTGT 97
|||| ||| |||||.||||||.|.|||||.||||||||.||..|..
BL01852___ycn 51 ---TTTGCTTATTGCCGGGGCGTTTATCGCGATCTTGAACCAAACGCTCC 97
BSNT_00679___ 98 TGATTACCGCACTTCCCCATATCATGAGGGATTTCAATGTCGATGC--CA 145
||.||||||||||.||.|||||.|||...||.||.||..|.||.|| ||
BL01852___ycn 98 TGGTTACCGCACTGCCGCATATTATGGCAGACTTGAACATAGACGCTACA 147
BSNT_00679___ 146 ACCAAGCACAATGGCTGACCACATCATTTATGTTAACCAATGGGATTTTA 195
| ||||.|||||||||||.||..|.||.|||.|.||.||.||||||.|.
BL01852___ycn 148 A--AAGCTCAATGGCTGACAACGGCGTTCATGCTGACAAACGGGATTCTC 195
BSNT_00679___ 196 ATTCCGATTACCGCGTTTTTAATTGAGAAATTCACAAGCCGGGCGCTGCT 245
||||||||||||||.|||||.||.||.||||||.|.|||||.|||||..|
BL01852___ycn 196 ATTCCGATTACCGCCTTTTTGATCGAAAAATTCTCGAGCCGCGCGCTCGT 245
BSNT_00679___ 246 CATCACAGCAATGAGCATTTTCACTGCCGGAACAGTCGTCGGAGCGTTCG 295
||||.|.||.||||||||.||..|.||.||||||||||||||.|||.|.|
BL01852___ycn 246 CATCGCGGCGATGAGCATCTTTGCGGCGGGAACAGTCGTCGGTGCGGTGG 295
BSNT_00679___ 296 CGCCGAACTTCCCGGTTCTGCTGACAGCGCGTATCATTCAAGCGGCTGGA 345
||||.|||||.||||||||.|||.|.|||||.||||||||.||.||.||.
BL01852___ycn 296 CGCCTAACTTTCCGGTTCTTCTGGCGGCGCGGATCATTCAGGCCGCAGGC 345
BSNT_00679___ 346 GCCGGCATTATGATGCCGCTCATGCAGACTGTATTCCTGACAATCTTTCC 395
|||||.|||||||||||||||||||||||..|.||..|.||.||.||.||
BL01852___ycn 346 GCCGGAATTATGATGCCGCTCATGCAGACGATCTTTTTAACGATTTTCCC 395
BSNT_00679___ 396 GATTGAAAAGCGCGGCCAGGCT---ATGGGTATGGTCGGATTGGTCATCT 442
|.|||||||.||||| |||| |||||.||||||||.|||||.|||.
BL01852___ycn 396 GGTTGAAAAACGCGG---GGCTGCAATGGGCATGGTCGGCTTGGTGATCG 442
BSNT_00679___ 443 CATTCGCGCCTGCGATCGGACCGACTCTTTCCGGATGGGCTGTCGA-AGC 491
||||.||.||.||.|||||||||||..|.||.||.|||...||||| |||
BL01852___ycn 443 CATTTGCACCGGCCATCGGACCGACATTGTCAGGCTGGATCGTCGACAGC 492
BSNT_00679___ 492 TTTCTCTTGGAGATCATTGTTTTATATTATTCTACCGTTTGCTGTGATTG 541
||| .|.|||||||..||.||||||||||||||.||..||||..||||||
BL01852___ycn 493 TTT-ACATGGAGATACTTATTTTATATTATTCTGCCAATTGCACTGATTG 541
BSNT_00679___ 542 AT-TTGATTCTTGCCAGCATCCTGATGAAAAACGTGACGACTTTAAGAAA 590
|| ||| |.||||.||.|.|.||||||||||||||.||||..||.|||.|
BL01852___ycn 542 ATCTTG-TGCTTGTCATCTTGCTGATGAAAAACGTCACGAAATTGAGAGA 590
BSNT_00679___ 591 AACA-CAGATTGATATTTTATCAGTCATCCTTTCAACATTTGGGTTCGGC 639
|||| ||| |.||.||..||||..|.|||||.||.|...|.||.||||||
BL01852___ycn 591 AACATCAG-TGGACATCATATCTATTATCCTGTCCAGCCTGGGTTTCGGC 639
BSNT_00679___ 640 GGCCTTCTGTACGGCTTC-TCAAGCGTCGGCTCTTACGGCTGGTCCAGTT 688
||..|..||||||||||| .||| ||.|||.||..|.||||||...||
BL01852___ycn 640 GGTTTATTGTACGGCTTCAGCAA-CGCCGGATCAGAAGGCTGGGGGAG-- 686
BSNT_00679___ 689 CA--ACCGTCTTGATTTCACTGCTG--GTGGGTGTCATCGCGCTGCTCTT 734
|| ||.||.||.|||||..| || ||.||||...||||.|||.||||
BL01852___ycn 687 CAATACTGTTTTAATTTCCTT--TGCAGTCGGTGCGGTCGCCCTGTTCTT 734
BSNT_00679___ 735 GTTTATCACAAGACAAATGAAGCTTGAAAAACCGATGCTGGAATTCCGCG 784
.||||||.|.||||||.||||..|..|||..|||||.||.||.||.||||
BL01852___ycn 735 CTTTATCTCTAGACAATTGAAAATCAAAAGGCCGATACTCGAGTTTCGCG 784
BSNT_00679___ 785 TCTTC---ACGTTTGGCGTTTTCAGCTTAACAACACTGCTGGGAACCCTC 831
|.||| .|| |||..|||| |...|||||||.||.||.||.|...||
BL01852___ycn 785 TTTTCCAATCG--TGGACTTTT-ACGATAACAACGCTACTTGGTATGATC 831
BSNT_00679___ 832 GTCTTTGCATTATTGATCGGTACGGAAACCATCCTGCCGCTTTATACACA 881
||.|||||||||.||||||||||.||.|||||..|||||||.||.||.||
BL01852___ycn 832 GTTTTTGCATTAATGATCGGTACTGAGACCATTTTGCCGCTGTACACGCA 881
BSNT_00679___ 882 AAATGTCAGAGACGTCACAGCTTTTGATACAGGGCTT-ATGCTCCTTCCG 930
|||.|||||||||||.||||||||.|||.| |||.|| |||||.||.|||
BL01852___ycn 882 AAACGTCAGAGACGTGACAGCTTTCGATTC-GGGTTTGATGCTTCTGCCG 930
BSNT_00679___ 931 GGAGCCGTTGTGATGGGCTTTATGTCGCCGATTATCGGCAGAATTTTTGA 980
||.||..|.|..||||||.|.|||||||||||.||||||.|.||||||||
BL01852___ycn 931 GGCGCGATAGCAATGGGCATCATGTCGCCGATCATCGGCCGGATTTTTGA 980
BSNT_00679___ 981 CCGTGTCGGCGGAAGAGGGCTGGCGATTGCCGGTTTCTGCATCATCT--- 1027
|....|||||||||.|||.||.||||||..|||.|| ||| |.|||
BL01852___ycn 981 CAAGATCGGCGGAAAAGGCCTTGCGATTATCGGGTT-TGC--CGTCTTGC 1027
BSNT_00679___ 1028 TCCTGACATCTCTGCCGTTTATGCAGCTG--ACTGACCATACGTCACTCG 1075
|.|||||.||..|.||||||..|.|.||| |.|| .||||.||.||..
BL01852___ycn 1028 TGCTGACGTCCATCCCGTTTGCGGACCTGCAAATG--GATACTTCGCTGA 1075
BSNT_00679___ 1076 CTTGGATTGTCGT--TTTATACACCGTTCGTCTCTTAGGCACCGCCATGA 1123
|.|..|||.|||| |||||||.| |.||..|..|.||.||..||||||
BL01852___ycn 1076 CATTTATTATCGTCATTTATACGC--TGCGGATGATGGGAACTTCCATGA 1123
BSNT_00679___ 1124 TCATGATGCCGGTGACAACAGCCGGAATCAACGCGCTGCCGCGC-CACTT 1172
|.||||||||..|.|||||.||.||.|||||.||.||.||| || |||.|
BL01852___ycn 1124 TTATGATGCCTCTCACAACGGCGGGCATCAATGCCCTTCCG-GCGCACCT 1172
BSNT_00679___ 1173 GATTCCGCACGGAACTGCGATGAACAACACGATTCGCCAAGTCGGCGGCT 1222
.||||||||||||||.|||||||||||.|||||.|||||..|||||||.|
BL01852___ycn 1173 CATTCCGCACGGAACAGCGATGAACAATACGATGCGCCAGATCGGCGGTT 1222
BSNT_00679___ 1223 CGATCGGAACCGCACTATTGGTTTCCGTGATGAG---------CAACCAG 1263
|||||||.||.||..|..||.|||||||.||||| |||..|.
BL01852___ycn 1223 CGATCGGCACGGCTGTTCTGATTTCCGTCATGAGTAATTCAGCCAAAAAC 1272
BSNT_00679___ 1264 GCCGC-ACATGCAGGCA--CGACAAATGTGAAGCACGCTGCCCTGCACGG 1310
||||| |||| ..|| ||..||||| |||| |.|.|||||
BL01852___ycn 1273 GCCGCGACAT---CTCATCCGTTAAATG-------CGCT--CATTCACGG 1310
BSNT_00679___ 1311 CATGAACGCCGCTTTTATTGTGGCTGCCGTCATTGCACTTGTCGGCTTCC 1360
||||||..||||.|||||.|||||.||.|||.|.||.||..||||.||..
BL01852___ycn 1311 CATGAATTCCGCCTTTATCGTGGCCGCTGTCTTGGCGCTGATCGGATTTA 1360
BSNT_00679___ 1361 TTCTCTCATTCACATT---AAAGAAACCTCAGCGCCCTGCCGAACA---G 1404
|.||.||.||.||||| ||||||.||.||| ||| |.|.|||| .
BL01852___ycn 1361 TCCTTTCGTTTACATTGAAAAAGAAGCCGCAG-GCC--GACAAACAAGGC 1407
BSNT_00679___ 1405 CAGCCGGCACGCTAA 1419
||||||||.||||.|
BL01852___ycn 1408 CAGCCGGCCCGCTGA 1422
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