Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03231 and BL01844
See
Amino acid alignment /
Visit
BSNT_03231 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence dna-align/BSNT_03231___phy.1.5803.seq
# -bsequence dna-align/BL01844___phyL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03231___phy-BL01844___phyL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03231___phy-BL01844___phyL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03231___phy
# 2: BL01844___phyL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1201
# Identity: 827/1201 (68.9%)
# Similarity: 827/1201 (68.9%)
# Gaps: 107/1201 ( 8.9%)
# Score: 2628.0
#
#
#=======================================
BSNT_03231___ 1 ATGAAGGTTTCAAAAACAATGCT--GCTAAGCA----CTGCCGCGGGTTT 44
|||||..|||..||||| ||| .||.|.|| .|||.||....||
BL01844___phy 1 ATGAACTTTTACAAAAC---GCTCGCCTTATCAACTCTTGCGGCATCCTT 47
BSNT_03231___ 45 ATTG-CTTAGCCTGA--CAGCA---ACCTCGGTGTCG--GC-TCA--TTA 83
|||| || .|||.| .|||| .||.|.|||.|| || ||| ||
BL01844___phy 48 ATTGTCT--CCCTCATGGAGCATTCTCCCCCGTGCCGAAGCTTCAGCTT- 94
BSNT_03231___ 84 TGTGAATGAGGAACATCATTTCAAAGTGACTGCACACACGGAGACAGATC 133
||.||| |.|||...||||||||..|..|.||||||||.|
BL01844___phy 95 -----ATAAGG------ACTTCTCGGTGACTGCCGATGCAGAGACAGAGC 133
BSNT_03231___ 134 CGGTCGCAT----CTGGCGATGACGCAGCAGATGACCCGGCCATTTGGGT 179
|||| |.|| || ||.|||||.||||||||||||||.||||||||
BL01844___phy 134 CGGT-GGATACCCCT---GACGACGCGGCAGATGACCCGGCGATTTGGGT 179
BSNT_03231___ 180 TCATGAAAAACACCCGGAAAAAAGCAAGTTGATTACAACAAATAAGAAGT 229
||||...||.||.||.|||||||||..|.||||.|||||||||||.||.|
BL01844___phy 180 TCATCCGAAGCAGCCTGAAAAAAGCCGGCTGATCACAACAAATAAAAAAT 229
BSNT_03231___ 230 CAGGGCTCG-TCGTGTATGATTTAGACGGAAAACAGCT-TCATTCTTATG 277
| .||||.| ||||.||.||||||.||||||||||||| .|| .|.|||.
BL01844___phy 230 C-TGGCTTGATCGTTTACGATTTAAACGGAAAACAGCTGGCA-GCCTATC 277
BSNT_03231___ 278 AGTTTGGCAAGCTCAATAATGTCGATCTGCGCTATGATTTTCCATTGAAC 327
.|||||||||..|.||.||.||||||||.|||||..|||||||..|..|.
BL01844___phy 278 CGTTTGGCAAATTAAACAACGTCGATCTCCGCTACAATTTTCCGCTCGAT 327
BSNT_03231___ 328 GGCGAAAAAATTGATATTGCTGCCGCATCCAATCGGTCCGAAGGAAAAAA 377
|||.||||||||||||||||.|..||.||.||.|||||.||.||.|||||
BL01844___phy 328 GGCAAAAAAATTGATATTGCCGGGGCCTCAAACCGGTCAGACGGCAAAAA 377
BSNT_03231___ 378 TACAATTGAAGTATATGCAATAGACGGGGATAAAGGAAAATTGAAAAGCA 427
.||..|||||.||||.||..|.|||||.||.|||...||..||||||.||
BL01844___phy 378 CACGGTTGAAATATACGCCTTTGACGGCGAAAAAAACAAGCTGAAAAACA 427
BSNT_03231___ 428 TTACTGATCCGAAACATCCTATTTCCACCAATATTTCTGAGGTTTATGGA 477
|.....||||..||.|.||||||...|||.|||||...|||||.|||||.
BL01844___phy 428 TCGTCAATCCTCAAAAACCTATTCAAACCGATATTGAGGAGGTGTATGGT 477
BSNT_03231___ 478 TTCAGCTTGTATCACAGCCAGAAAACAGGAGCA--TTTTACGCATTAGTG 525
||||||.|||||||||||||||||||.| ||| ||.|||||..|.|||
BL01844___phy 478 TTCAGCCTGTATCACAGCCAGAAAACCG--GCAAGTTCTACGCCATGGTG 525
BSNT_03231___ 526 ACAGGCAAACAA-GGGGAATTTGAGCAGTATGAAATTGTTGATGGTGGAA 574
||.|| |||.|| ||.|||||.|||||.||.|||.|..||||....||||
BL01844___phy 526 ACCGG-AAAGAACGGAGAATTCGAGCAATACGAACTGTTTGACAACGGAA 574
BSNT_03231___ 575 AGGGTTATGTAACAGGGAAAAAAGTGCGTGAATTTAAGTTGAATTCTCAG 624
|.||..|.||...|||.|||||.||.||...|||.||..|||..|||||.
BL01844___phy 575 AAGGACAAGTCGAAGGCAAAAAGGTCCGCTCATTCAAAATGAGCTCTCAA 624
BSNT_03231___ 625 ACCGAAGGCCTTGTTGCGGATGATGAGTACGGAAACCTATACATAGCAGA 674
||.|||||.||||..||.||||||||.|||||.||..|.|||||.||.||
BL01844___phy 625 ACAGAAGGGCTTGCAGCAGATGATGAATACGGCAAAATGTACATCGCTGA 674
BSNT_03231___ 675 GGAAGATGAGGCCATCTGGAAATTTAACGCTGAGCC---CGGCGGAGGAT 721
.|||||.|..||.||.|||...||.|.|||.||||| ||||||| |||
BL01844___phy 675 AGAAGACGCTGCGATTTGGTCTTTCAGCGCCGAGCCAAACGGCGGA-GAT 723
BSNT_03231___ 722 CAAAGGGGCAGGTTGTTGACCGTGC-----GACAGGAGATCATTTGACAG 766
||.||..|..||||.||.||.|| |||.| |||||.||.|
BL01844___phy 724 --AAAGGAAAAATTGTCGATCGCGCAGGCGGACCG-----CATTTAACCG 766
BSNT_03231___ 767 CTGATATTGAAGGACTGACAATCTATTATGCACCAAATGGCAAAGGATAT 816
|||||||||||||.|||||.||.||.||.|.|..|.|.|||.||||||||
BL01844___phy 767 CTGATATTGAAGGGCTGACGATTTACTACGGAGAAGACGGCGAAGGATAT 816
BSNT_03231___ 817 CTCATGGCTTCAAGTCAAGGAAATAACAGCTATGCAATGTATGAACGGCA 866
.|.||.||.||.|||||.||..|||||.|.|||||.||.|||||.||||
BL01844___phy 817 TTGATCGCGTCCAGTCAGGGCGATAACCGTTATGCCATCTATGACCGGC- 865
BSNT_03231___ 867 GGGGGAAAATCG-CTATGTAGCCAACTTTGAGATTACAGATGGCG----A 911
|.|||||||.|| ||||||.|||.|.|||...||| ||||.|| |
BL01844___phy 866 GCGGGAAAAACGACTATGTCGCCGATTTTTCAATT---GATGACGGTAAA 912
BSNT_03231___ 912 GAAGATAGACGGTACTAGTGACACGGATGGTATTGATGTTCTCGGTTTCG 961
||| ||.|||||.||.||.||.||.|||||.||.||.||..||||.||||
BL01844___phy 913 GAA-ATCGACGGGACAAGCGATACCGATGGAATCGACGTCATCGGCTTCG 961
BSNT_03231___ 962 GACTTGGCCCAAAATATCCGTACGGGATTTTTGTGGCGCAGGATGGCGAA 1011
|.||.|||..|||||||||.|||||.||.|||||.||.||.||.||||||
BL01844___phy 962 GCCTCGGCAAAAAATATCCATACGGCATCTTTGTCGCCCAAGACGGCGAA 1011
BSNT_03231___ 1012 AATATCGATAACGGACAAGCC-GTCAATCAAAATTTCAAAATTGTATCGT 1060
||||..||.||.|||| |||| |.||||||.||.|||||||||||.||.|
BL01844___phy 1012 AATACGGAAAATGGAC-AGCCAGCCAATCAGAACTTCAAAATTGTCTCCT 1060
BSNT_03231___ 1061 GGGAACAAATTGC--ACAGCATCTCGGCGAAATGCCTGATCTTCATAAAC 1108
|||||.||||||| || || .||.|.|||.|.|||||||.|..||.|.|
BL01844___phy 1061 GGGAAAAAATTGCTGAC-GC-GCTGGACGACAAGCCTGATATCGATGATC 1108
BSNT_03231___ 1109 AGGTGAA--CCCGAGGAAGCTGAAAGACCGTTCTGACGGCTAG------- 1149
||||.|| ||||| ||.||||||.|.|| ||
BL01844___phy 1109 AGGTCAATCCCCGA--AAACTGAAAAAACG-----------AGCCAAATA 1145
BSNT_03231___ 1149 - 1149
BL01844___phy 1146 A 1146
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.