Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00642 and BL01829

See Amino acid alignment / Visit BSNT_00642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_00642___yckK.1.5803.seq
#    -bsequence dna-align/BL01829___yckK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00642___yckK-BL01829___yckK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00642___yckK-BL01829___yckK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00642___yckK
# 2: BL01829___yckK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity:     607/832 (73.0%)
# Similarity:   607/832 (73.0%)
# Gaps:          50/832 ( 6.0%)
# Score: 2196.0
# 
#
#=======================================

BSNT_00642___      1 ATGAAAAAAGCATTATTGGCTTTATTCATGGTCGTAAGTATTGCAGCTCT     50
                     |||||.||||||.||||.|||.|||             |||||..|||.|
BL01829___yck      1 ATGAAGAAAGCAATATTCGCTGTAT-------------TATTGACGCTGT     37

BSNT_00642___     51 T-------------GCAGCTTGCGGAG---CAGGAAATGACAATCAGTCA     84
                     |             ||.||.|||||.|   ||||   .||||||   ||.
BL01829___yck     38 TGATCACCGTGATGGCCGCATGCGGCGCGTCAGG---GGACAAT---TCC     81

BSNT_00642___     85 AAAGATAATGCCAA----AGATGGCGA---TCTTTGGGCTTCAATTAAGA    127
                     ||.|||||    ||    ||..|||||   .||.|||.||||||||||..
BL01829___yck     82 AAGGATAA----AAACGCAGCCGGCGACAGCCTCTGGTCTTCAATTAAAG    127

BSNT_00642___    128 AAAAAGGTGTGCTCACAGTCGGAACGGAAGGAACATATGAGCCGTTCACT    177
                     |.|||||.||..|.||||||||.||.||||||||.||.||.||.||.||.
BL01829___yck    128 ATAAAGGCGTATTGACAGTCGGTACTGAAGGAACGTACGAACCTTTTACA    177

BSNT_00642___    178 TACCACGACAAAGACACTGATAAACTGACTGGCTATGATGTCGAAGTTAT    227
                     |.||||||.|||.|.||.||||||.|.||.||.||||||||||||||.||
BL01829___yck    178 TTCCACGATAAAAAAACAGATAAATTAACAGGTTATGATGTCGAAGTGAT    227

BSNT_00642___    228 -CACAGAAGTCGCAAAACGCCTCGGGCTTAAAGTCGACTTTAAGGAAACA    276
                      || .||||||||.||.||||||...||.||||..||.|||||.|||||.
BL01829___yck    228 GCA-GGAAGTCGCCAAGCGCCTCAACCTGAAAGCTGAATTTAAAGAAACG    276

BSNT_00642___    277 CAATGGGACAGCATGTTTGCCGGCCTGAATTCCAAACGGTTTGACGTCAT    326
                     ||.||||||||||||||||||||.||.||.||.||.||.|||||||||.|
BL01829___yck    277 CAGTGGGACAGCATGTTTGCCGGACTCAACTCAAAGCGTTTTGACGTCGT    326

BSNT_00642___    327 TGCCAACCAAGTCGGAAAAACAGATCGTGAAGACAAATATGATTTCTCAG    376
                     |||||||||||||||.||||.|||.||||||||..|.||.|||||.||.|
BL01829___yck    327 TGCCAACCAAGTCGGGAAAAAAGACCGTGAAGATCAGTACGATTTTTCTG    376

BSNT_00642___    377 ATAAATACACAACATCAAGAGCCGTTGTCGTTACGAAAAAAGACAACAAC    426
                     ||..|||.|||||.||...||||||.||.||.||.|||...|||||||||
BL01829___yck    377 ATTCATATACAACTTCCCAAGCCGTCGTTGTCACAAAAGCGGACAACAAC    426

BSNT_00642___    427 GATATTAAGTCAGAAGCAGATGTAAAAGGAAAAACATCAGCTCAATCACT    476
                     |||.|.|||||.||||.||||||.|||||.||||.|.|.||.||.||..|
BL01829___yck    427 GATGTAAAGTCTGAAGGAGATGTCAAAGGGAAAAAAGCCGCGCAGTCTTT    476

BSNT_00642___    477 GACAAGCAACTACAACAAATTAGCTACAAATGCCGGCGCTAAAGTAGAAG    526
                     ||||||||||||.||..|..|.||.|.|||.|||||||||.||.|.||||
BL01829___yck    477 GACAAGCAACTATAATGACCTTGCGAAAAACGCCGGCGCTGAAATCGAAG    526

BSNT_00642___    527 GCGTTGAAGGTATGGCGCAGGCCCTTCAAATGATCCAGCAAGGCCGCGTC    576
                     ||||.|||||.|||||.||.||..||||..||||.|||||.|||||.|||
BL01829___yck    527 GCGTAGAAGGAATGGCTCAAGCGTTTCAGCTGATTCAGCAGGGCCGTGTC    576

BSNT_00642___    577 GATATGACATACAACGATAAACTTGCCGTATTGAACTACTTAAAAACATC    626
                     ||..|.||.||.|||||||||||.||.||..|||||||.||.||.||.||
BL01829___yck    577 GACCTCACCTATAACGATAAACTGGCGGTGCTGAACTATTTGAAGACGTC    626

BSNT_00642___    627 TGGCAATAAAAACGTGAAAATCGCGTTTGAAACAGGTGATCCTCAGTCAA    676
                     .||.||.||||||.||||||||||.|||||||||||.||.||.||..|.|
BL01829___yck    627 AGGAAACAAAAACCTGAAAATCGCTTTTGAAACAGGCGAGCCGCAAACTA    676

BSNT_00642___    677 CATATTTCACGTTCCGTAAAGGAAGCGGCGAGGTTGTTGATCAA-GTCAA    725
                     |..||||..|.|||||.||||||||||||||..|.||||| ||| |||||
BL01829___yck    677 CGCATTTTGCTTTCCGCAAAGGAAGCGGCGAACTGGTTGA-CAAGGTCAA    725

BSNT_00642___    726 CAAAGCATTAAAAGAAATGAAAGAGGACGGGACTCTTTCTAAAATTTCTA    775
                     |...||..|.||.||.|||||||||||.||.||.||..|.|||||..|.|
BL01829___yck    726 CTCCGCGCTGAAGGACATGAAAGAGGATGGCACACTCGCGAAAATAGCGA    775

BSNT_00642___    776 AAAAATGGTTCGGCGAAGATGTTTCTAAATAA    807
                     |.||||||||.|||||||||||||||||.|||
BL01829___yck    776 AGAAATGGTTTGGCGAAGATGTTTCTAAGTAA    807


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