Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00637 and BL01826
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00637___yczE.1.5803.seq
# -bsequence dna-align/BL01826___yczE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00637___yczE-BL01826___yczE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00637___yczE-BL01826___yczE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00637___yczE
# 2: BL01826___yczE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity: 478/688 (69.5%)
# Similarity: 478/688 (69.5%)
# Gaps: 65/688 ( 9.4%)
# Score: 1604.0
#
#
#=======================================
BSNT_00637___ 1 GTGAAGCAAGAACTTGTTCTGCGCTGGACATTTTATTTTGCCGGTTTGAT 50
.||||||..|||||||||.||||||||...||||||||||.|||.|||||
BL01826___ycz 1 TTGAAGCGGGAACTTGTTTTGCGCTGGCTTTTTTATTTTGTCGGATTGAT 50
BSNT_00637___ 51 CATTTTGGCTTTTGGTGTATCCCTGACGATAGAAGGAAAAGCACTCGGCA 100
..|||||.||||.||.||.||.||.|||||.|||||.||||..|||||||
BL01826___ycz 51 TGTTTTGTCTTTCGGGGTTTCTCTTACGATTGAAGGGAAAGTGCTCGGCA 100
BSNT_00637___ 101 TTAGTCCGTGGGATGCATTTCATTACAGCCTGTTTCAGCACTTCGGGCTT 150
|..||||.||||||||.|||||.|||.|.||||.|..||..||.||.|||
BL01826___ycz 101 TCGGTCCTTGGGATGCGTTTCACTACGGGCTGTATATGCTTTTGGGCCTT 150
BSNT_00637___ 151 ACCGTCGGCCAGTGGTCCATCATTATTGGAGCGCTCATCGTCGGATTCAC 200
||.||||||||.|||.|.||.|||.|.||.|||.|||||||.||.||.||
BL01826___ycz 151 ACGGTCGGCCAATGGGCGATTATTGTCGGGGCGGTCATCGTAGGTTTAAC 200
BSNT_00637___ 201 GTCATTGTTTACGAGAGCTTGGCCGAAAATTGGGGCCCTCCTGAATATGG 250
|||.||.|||||.|.|||.|||||||||||.||.|||.|.||.||||||.
BL01826___ycz 201 GTCCTTATTTACAAAAGCATGGCCGAAAATCGGCGCCGTGCTCAATATGC 250
BSNT_00637___ 251 TGCTCATTGGTGTATTTATAGATTTTTTCAATTTCATTCTGCCTGCCCCC 300
||.|.||.|||.|.|||||||||||.||.|.||..|||||.||.|.|||.
BL01826___ycz 251 TGTTAATCGGTATTTTTATAGATTTCTTTACTTATATTCTTCCAGACCCG 300
BSNT_00637___ 301 TCGACCTACA---CAGGCTC-GATCATCGTCTTC----TCTCTAGGCGTG 342
...||.||.| ||.||.| | ||||.||| || |||||.
BL01826___ycz 301 GAAACGTATATTTCAAGCACTG----TCGTATTCGTGATC----GGCGTT 342
BSNT_00637___ 343 GTGCTGATTGGTTACGGCGTCGGTGTTTATGTATCAGCAGGCCTTGGCGC 392
.|..|.||.||||||||.|||||..||||||||||.||.|..||.||.||
BL01826___ycz 343 ATTTTTATCGGTTACGGAGTCGGCATTTATGTATCGGCCGATCTCGGTGC 392
BSNT_00637___ 393 GGGGCCGCGTGATTCACTGATGATGCTGATTACAGAAAAAACCGGCTGGA 442
|||.||||||||.||.||||||.|..|||||.|.||.|||||.|||||||
BL01826___ycz 393 GGGTCCGCGTGACTCCCTGATGCTTTTGATTTCCGAGAAAACGGGCTGGA 442
BSNT_00637___ 443 ATGTGCAATGGGTGCGGAACGGCATGGAATTAACCATTTTGTTTG--CGG 490
|.||.||.|||||.||.|||||.|||||..|.||.||||| .||| |||
BL01826___ycz 443 ACGTTCAGTGGGTCCGAAACGGAATGGAGCTGACGATTTT-ATTGATCGG 491
BSNT_00637___ 491 CATGG-GGCATGGGCGGACCGATCGGTTTTGGCACCATTTTGACCGCCAT 539
| ||| .|| |.|||||.||||||||..|.||.||..||||.||||||||
BL01826___ycz 492 C-TGGCTGC-TCGGCGGGCCGATCGGCATCGGTACTGTTTTAACCGCCAT 539
BSNT_00637___ 540 CCTCACCGGACTCATTCTGCGTTTTTCATTGCCGCAGTCAATCCAG-TTG 588
..|.|||||.||.|||.||||.|||||.|||||||||||.|..||| ||
BL01826___ycz 540 TTTAACCGGCCTGATTTTGCGGTTTTCTTTGCCGCAGTCCAAACAGCTT- 588
BSNT_00637___ 589 CTGAATTATGCTG---TGGC---AAGGCGGA-CAGCCGCTGTGAAAGCAT 631
|.|| |.||.| |||| ||||||.| ||| .||||..||
BL01826___ycz 589 -TTAA--AAGCAGCAATGGCAGGAAGGCGCATCAG-AGCTGCCAA----- 629
BSNT_00637___ 632 CTCCGCCTGTACA-------CTAA-------------- 648
||||||||| ||.|
BL01826___ycz 630 ----GCCTGTACATATGTCGCTGAAAAAAAACGGATGA 663
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