Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00635 and BL01825
See
Amino acid alignment /
Visit
BSNT_00635 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_00635.1.5803.seq
# -bsequence dna-align/BL01825___sfp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00635-BL01825___sfp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00635-BL01825___sfp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00635
# 2: BL01825___sfp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity: 460/762 (60.4%)
# Similarity: 460/762 (60.4%)
# Gaps: 168/762 (22.0%)
# Score: 1273.0
#
#
#=======================================
BSNT_00635 1 ATGAAGATTTACGGAATTTATATGGACCGCCCGCTTTCA----CAGGAAG 46
|||||||||||||...|||||||||| ||| |.|||||
BL01825___sfp 1 ATGAAGATTTACGCCGTTTATATGGA----------TCAGCTGCCGGAAG 40
BSNT_00635 47 -----------AA---AATGA-----ACGGTTCATGTCTTTCATATCACC 77
|| ||||| |.|| ||| |
BL01825___sfp 41 CCGGTCAATTTAACCGAATGATGGCCATGG----TGT------------C 74
BSNT_00635 78 TGAA-AAACGGGAGAAA---TGCCGG-AGATTTTATCATAAA----GAAG 118
|||| |||.|.||.||| || || |||| .||.|.| ||||
BL01825___sfp 75 TGAAGAAAAGCGAAAAAAAGTG--GGCAGAT----ACAGATATCCCGAAG 118
BSNT_00635 119 ATGCTCA-CCGCACCCTGCTGGGAGATGTGCTCGTTC---GCTCAGTCAT 164
|||| || |||.||.|||.|.|||||.|||||.| | ||.|| ||||
BL01825___sfp 119 ATGC-CAGCCGGACGCTGATCGGAGAAGTGCTGG--CGAGGCACA-TCAT 164
BSNT_00635 165 AAGCAGGCA--GTATCAGTTGGACAAATCCG-ATATCCGCTT--CAGCAC 209
.||| |.| ||.||| ||.|.|.|||..| |.|||||.|| |||.|.
BL01825___sfp 165 CAGC--GAAACGTTTCA-TTTGCCGAATGAGCAGATCCGTTTTACAGAAG 211
BSNT_00635 210 GCAGGAATACGGGAAGCCG--TGCATCCCTGA---TCTTCCCGACGCTCA 254
|.||| |||||.||.||| || |||| |||...||||..|||
BL01825___sfp 212 GAAGG--TACGGCAAACCGGCTG-----CTGAAGGTCTGAACGACTTTCA 254
BSNT_00635 255 TTTCAACATTTCTCACTCCGGCCGCTGGGTCATTGGTGCGTTTGA----- 299
||||||||||||.||||||||....|||.||.| ||||| ||
BL01825___sfp 255 TTTCAACATTTCCCACTCCGGAAAATGGATCGT--GTGCG---GAGCCGG 299
BSNT_00635 300 TTCACAGCCGATCGGCATAGATATCGAAAAAACGAAACCGATCAGCCTTG 349
..|.|||||||||||..|.|||.|||||||.|..||.|||||||...|.|
BL01825___sfp 300 CGCGCAGCCGATCGGAGTGGATGTCGAAAAGATCAAGCCGATCAATTTCG 349
BSNT_00635 350 AGATCGCCAAGCGCTTCTTTTCAAAAACAGAGTACAGCGACCTTTTAGCA 399
|.||.|||||.||.||.||||||....|.|||.||...||.|| .
BL01825___sfp 350 ACATTGCCAAACGGTTTTTTTCACCTTCCGAGCACGATGATCT------C 393
BSNT_00635 400 AAAGACAAGGACG-AGCAGACAGAC-----TATTTTTATCATCTATGGTC 443
|..||.||||||| |.||||..|.| |||||.||||||.|.|||.|
BL01825___sfp 394 ATGGAAAAGGACGAATCAGAACGCCTGTCGTATTTCTATCATTTGTGGAC 443
BSNT_00635 444 AATGAAAGAAAGCTTTATCAAACAGGAAGGCAAAGGCTTATCGCTTCCGC 493
.|||||||||||||||||.|||||||..||.||||||.|.||.||.||||
BL01825___sfp 444 GATGAAAGAAAGCTTTATTAAACAGGCGGGAAAAGGCCTGTCTCTGCCGC 493
BSNT_00635 494 TTGATTCCTTTTCAGTGCGCCTGCACCAGGACGGACAAGTATCCATTGAG 543
||||||||||.||.||....|||.||.|..|.||.| |||
BL01825___sfp 494 TTGATTCCTTCTCCGTCAAACTGAACGAACAGGGGC-----------GAG 532
BSNT_00635 544 CTTC--CGGA---------CAGCCATTCCCCATGCTATATCAAAACGTAT 582
|||| .||| |.||.||.|.||.||||||||..||.|.|||
BL01825___sfp 533 CTTCGGTGGAAACTCCCCCCGGCTATCCGCCTTGCTATATACAAGCCTAT 582
BSNT_00635 583 GAGGTCGATCCCGGCTACAAAATGGCTGTATG---CGCCGCACACCCTGA 629
||..|.||.||||||||.||||||||.||.|| ||||||| |||||
BL01825___sfp 583 GAAATTGACCCCGGCTATAAAATGGCGGTGTGTTCCGCCGCA---CCTGA 629
BSNT_00635 630 TTTCCCCG--AGGAT----ATCACAATAGTCTCG-TACGAAGA------- 665
.||.|||| .|||| ||.|.|| | |.||..||
BL01825___sfp 630 ATTTCCCGGCCGGATTGTGATGAAAA-------GCTGCGCTGAACTGTCA 672
BSNT_00635 666 --GCTTTTATAA 675
|||||.|
BL01825___sfp 673 ATGCTTTAA--- 681
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.