Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00431 and BL01786
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_00431___ybgJ.1.5803.seq
# -bsequence dna-align/BL01786___glsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00431___ybgJ-BL01786___glsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00431___ybgJ-BL01786___glsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00431___ybgJ
# 2: BL01786___glsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity: 742/1014 (73.2%)
# Similarity: 742/1014 (73.2%)
# Gaps: 60/1014 ( 5.9%)
# Score: 2613.5
#
#
#=======================================
BSNT_00431___ 1 ATGA---AAGAATTGATAAAAGAGCACCAGAAAGACATAAACCC------ 41
|||| |||.|||| || ||||.|..||.|..||
BL01786___gls 1 ATGAATGAAGTATTG------GA-----AGAACGCTATGACGCCCGCTTC 39
BSNT_00431___ 42 -GGCGTTACAG-CTTCATGATTGGGTTGAATACTATCGCCCTTTTGCCGC 89
|||..|.|.| |||.|.||||.|||.|||.|.||.||.||||||.||.|
BL01786___gls 40 TGGCAATCCCGCCTTGAAGATTTGGTCGAACATTACCGTCCTTTTTCCTC 89
BSNT_00431___ 90 CAATGGACAAAGCGCAAACTATATCCCCGCTTTAGGAAAAGTCAATGATT 139
.|..||||..|.|||..|.||.||.|||||||||||||||.|| ||.|
BL01786___gls 90 AAGCGGACGCAACGCCGAATACATTCCCGCTTTAGGAAAAATC---GACT 136
BSNT_00431___ 140 C---ACAGCTCGGCATCTGTGT-ATTGGAGC-CTGATGGAACGATGATAC 184
| .||||||||||||||||| ||.| || |||||..|||||||||..
BL01786___gls 137 CTAACCAGCTCGGCATCTGTGTGATCG--GCTCTGATCAAACGATGATCA 184
BSNT_00431___ 185 ACGCCGGCGACTGGAACGTCTCTTTTACCCTGCAAAGCATTTCAAAAGTG 234
|.||.||..|.|.|.||||.||.||.||.||.||.|||||.||.||.|||
BL01786___gls 185 AAGCAGGAAATTCGGACGTATCATTCACACTCCAGAGCATCTCGAAGGTG 234
BSNT_00431___ 235 ATTAGCTTTATTGCCGCCTGCATGAGCCG--CGGCATTCCCTATGTGCTG 282
||.||||||||.||.||.||..||| || .||.|||.|.||.||..|.
BL01786___gls 235 ATCAGCTTTATCGCAGCGTGTTTGA--CGAAAGGGATTTCTTACGTATTA 282
BSNT_00431___ 283 GACCGCGTAGATGTCGAGCCGACAGGCGACGCCTTTAATTCAATCATCCG 332
|||||.||.|||||.||.|||||.||.|||||.||.||||||||||||||
BL01786___gls 283 GACCGTGTTGATGTAGAACCGACGGGAGACGCGTTCAATTCAATCATCCG 332
BSNT_00431___ 333 GCTCGAAATCAACAAGCCGGGGAAGCCCTTCAATCCCATGATCAACGCGG 382
.||.|||||..||||||||||.|||||.||.||.||.|||||||||||.|
BL01786___gls 333 CCTTGAAATGCACAAGCCGGGAAAGCCGTTTAACCCGATGATCAACGCCG 382
BSNT_00431___ 383 GCGCCCTCACCATCGCTTCGATTCTTCCCGGAGAATCGGCA-TACGAAAA 431
|.||.||.|||.|..|.|||||.||||||||.||||||||| |..|||||
BL01786___gls 383 GAGCGCTGACCGTTTCGTCGATCCTTCCCGGTGAATCGGCACTGGGAAAA 432
BSNT_00431___ 432 GCTCGAGT---TTCTTTACTCGGTGATGGAAACTTTGATAGGAAAACGGC 478
.|.|||| |||.|.|| ||.||.||||...||||.||||||||||
BL01786___gls 433 -ATAGAGTCGCTTCATGAC---GTCATTGAAAAAATGATTGGAAAACGGC 478
BSNT_00431___ 479 -CGAGAATTC-ATGAGGAAGTATTCCGTTCTGAATGGGAAACCGCCCACC 526
.|||| || ||||||||||.||.||.||.||.|||.|.||||||||.|
BL01786___gls 479 TTGAGA--TCAATGAGGAAGTCTTTCGGTCAGAGTGGCAGACCGCCCATC 526
BSNT_00431___ 527 GCAACAGAGCGCTGGCCTACTATTTAAAAGAAACAAACTTTTTAGAAGCT 576
|.||||||||..|||||.|.||||||||.|||||...|||..|.|||||.
BL01786___gls 527 GGAACAGAGCATTGGCCCATTATTTAAAGGAAACCGGCTTCCTCGAAGCA 576
BSNT_00431___ 577 GAAGTAGAAGAAACACTTGAGGTGTACTTGAAGCAATGCGCTATGGAGAG 626
||.||.||||||||.|||||.||.||..||||.||||||.|||||||..|
BL01786___gls 577 GACGTTGAAGAAACGCTTGAAGTCTATCTGAAACAATGCTCTATGGAAGG 626
BSNT_00431___ 627 CACCACAGAAGATATTGCGTTGATCGGCCTGATCCTTGCTCATGACGGGT 676
.|.|||.|||||.||.||.|||||||||.||||.|||||..|||||||.|
BL01786___gls 627 AAGCACTGAAGACATCGCCTTGATCGGCATGATTCTTGCAAATGACGGAT 676
BSNT_00431___ 677 ATCATCCGATTCGACGCGAGCAGGTGATTCCAAAAGATGT-----GGCAA 721
|.|||||..|.||.||.||.||.||.|||||.||.||||| |||
BL01786___gls 677 ACCATCCTTTCCGCCGTGAACATGTCATTCCGAAGGATGTCGCGCGGC-- 724
BSNT_00431___ 722 AATTGGCCAAGGCGTTAATGCTGACGTGCGGCATGTACAACGCTTCAGGC 771
||.|.||.||.|||||||||||||||||.|||||.||.||.|||||.
BL01786___gls 725 ---TGACAAAAGCTTTAATGCTGACGTGCGGAATGTATAATGCATCAGGA 771
BSNT_00431___ 772 AAATATGCGGCGTTTGTCGGCGTGCCGGCCAAAAGCGGCGTCTCCGGCGG 821
||||..|||||.|||||||||.|.|||||.||||||||||||||||||||
BL01786___gls 772 AAATTCGCGGCCTTTGTCGGCATTCCGGCAAAAAGCGGCGTCTCCGGCGG 821
BSNT_00431___ 822 CATCATG-GCGCTGGTGCCTCCAAGCGCCAGAAGAGAACAGCCTTTTCAA 870
.|||||| |||| ||||||..|.||||..|.||||||||||||||||||.
BL01786___gls 822 AATCATGTGCGC-GGTGCCCGCCAGCGTGAAAAGAGAACAGCCTTTTCAG 870
BSNT_00431___ 871 TCCGGATGCGGCATCGGCATTTACGGGCCTGCCATTGATGAATACGGTAA 920
..||||||||||||||||||.||.||.||.||.|||||.||.|||||.||
BL01786___gls 871 CACGGATGCGGCATCGGCATCTATGGTCCGGCGATTGACGATTACGGAAA 920
BSNT_00431___ 921 CAGCCTCACTGGCGGTATGCTGCTGAAGCATATGGCGCAGGAGTGGGAGC 970
||||.|.||.|||||.|||||..|.||.|||||.||.|..||.|||||.|
BL01786___gls 921 CAGCATGACGGGCGGAATGCTTTTAAAACATATAGCCCGTGAATGGGATC 970
BSNT_00431___ 971 TCAGCATTTTTTAA 984
||||.|||||||||
BL01786___gls 971 TCAGTATTTTTTAA 984
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