Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00427 and BL01781

See Amino acid alignment / Visit BSNT_00427 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence dna-align/BSNT_00427___mmuM.1.5803.seq
#    -bsequence dna-align/BL01781___mmuM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00427___mmuM-BL01781___mmuM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00427___mmuM-BL01781___mmuM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00427___mmuM
# 2: BL01781___mmuM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 984
# Identity:     679/984 (69.0%)
# Similarity:   679/984 (69.0%)
# Gaps:          72/984 ( 7.3%)
# Score: 2202.5
# 
#
#=======================================

BSNT_00427___      1 ATG---AATCCTATCCAACACATATTAGATACATAC------CCGCTTAT     41
                     |||   |||||.||||.| ||.|.||   |||| ||      |.| |.||
BL01781___mmu      1 ATGACAAATCCGATCCGA-ACTTCTT---TACA-ACAATTTTCTG-TCAT     44

BSNT_00427___     42 TGTGCTAGACGGCGCCATGGCGACCGAGCTTGAACGCAAGGGCTGTAATT     91
                     |.|.||.||||||||.|||||.||||||||||||||..|.||||||.|||
BL01781___mmu     45 TATACTTGACGGCGCGATGGCCACCGAGCTTGAACGGTACGGCTGTGATT     94

BSNT_00427___     92 TGAATGACAGTCTGTGGTCGGCAAAAATCCTGATGGAAGAGCCAAATCTG    141
                     ||||.||.||.||||||||.||.|||||.||.||.|||.|.||..|.||.
BL01781___mmu     95 TGAACGATAGCCTGTGGTCTGCGAAAATTCTCATCGAAAACCCCGAGCTT    144

BSNT_00427___    142 ATTAAACAAGTACATACT-GATTATTTCGCG-GCAGGCGCCGATTGTGCA    189
                     ||.||||||||.||| || ||||||||| || ||.|||||||||||.||.
BL01781___mmu    145 ATCAAACAAGTCCAT-CTGGATTATTTC-CGTGCGGGCGCCGATTGCGCG    192

BSNT_00427___    190 ATCACTGCCAGCTATCAGTCTACATTTGAAGGCTTTGCCGCACGCGGGCT    239
                     ||.||.||||||||||||||.||..||||.||.||..|...||||||.||
BL01781___mmu    193 ATTACAGCCAGCTATCAGTCGACGGTTGAGGGTTTCACAAAACGCGGCCT    242

BSNT_00427___    240 GAGCGAAGCGGAAGCACGCCGGCTCATC---GAGT-TGTCCGTCAGCATC    285
                     .||||||...|||||.|.||..||||||   |||| ||||||||    |.
BL01781___mmu    243 TAGCGAACAAGAAGCGCTCCACCTCATCCGGGAGTCTGTCCGTC----TT    288

BSNT_00427___    286 GCAGCTGAAGCACGTGATGAATTTTGGTCGCTTGAAGAGAACCGTTTGAA    335
                     ||.||.||||||||.||||||||.|||.||..|...||.|||||  .|||
BL01781___mmu    289 GCTGCAGAAGCACGCGATGAATTCTGGGCGGCTCCGGAAAACCG--CGAA    336

BSNT_00427___    336 --TCGGCCAAAACCGATCATTGCGGCTTCTGTAGGCCCTTATGGCGCTTA    383
                       .|||||.||||||.|..|.||.|||||.|||||||||||.|||||.|.
BL01781___mmu    337 GGCCGGCCTAAACCGTTTGTAGCAGCTTCAGTAGGCCCTTACGGCGCCTT    386

BSNT_00427___    384 TCTTGCAGACGGGTCTGAGTATCGCGGCAACTACG----CAATATCAGAA    429
                     |.|.||.||.||.||.||.||||..||.||.||.|    ||    |||||
BL01781___mmu    387 TTTAGCGGATGGTTCCGAATATCAGGGAAATTATGGCGTCA----CAGAA    432

BSNT_00427___    430 GATGAACTGATTGAATTTCATCGCCCCCGGATGAA--GGCGC--TGATTG    475
                     ||||||.||...||.|||||   |...|||| |||  |||||  |.||.|
BL01781___mmu    433 GATGAATTGGCCGATTTTCA---CAGGCGGA-GAATGGGCGCTTTAATCG    478

BSNT_00427___    476 AAGCCGGAGCTGATGTATTGGCATGCGAAACGATTCCGTGTCTGACTGAA    525
                     ||||.||.||.|||.|.||||||||.||.||.||.|||||.||..|.|||
BL01781___mmu    479 AAGCAGGCGCCGATATTTTGGCATGTGAGACAATACCGTGCCTTTCAGAA    528

BSNT_00427___    526 GCCAAAGCGATTGTTCGGCTGTTGAAGGAATTTCCTGAAACGTATGCATG    575
                     ||.|||||.||.||||...|.||.||.||.||.||.||.||..||||.||
BL01781___mmu    529 GCAAAAGCTATCGTTCATTTATTAAAAGAGTTCCCGGATACACATGCGTG    578

BSNT_00427___    576 GATCAGCTTCAGTGCTAAAGACGGCCTGCATATCAGTGACG----GAACA    621
                     ||||||.|||||.|||||||||||.|..||||||||.||||    |||..
BL01781___mmu    579 GATCAGTTTCAGCGCTAAAGACGGACGCCATATCAGCGACGGTACGAAAG    628

BSNT_00427___    622 CCTGCAGCTGACTGCGCATCATGGCTTGATGAACACCGCCAAATTGCAGC    671
                     ||.||    ||.|||||....|||||.|||.|.||...|||..||||.||
BL01781___mmu    629 CCGGC----GAATGCGCGAAGTGGCTCGATCAGCATGACCAGGTTGCGGC    674

BSNT_00427___    672 ACTCGGCATCAACTGCACGCCGCTTCAGCATATCCCTTCCTTGATAGAGG    721
                     |.|.||..|.|||||.||||.|||..|||||.||.||||..|.||.|..|
BL01781___mmu    675 AGTAGGAGTAAACTGTACGCGGCTGGAGCATGTCTCTTCGCTCATCGGCG    724

BSNT_00427___    722 AGTTAAAAAAGAACACGTCAAAACCGATCATTGTCTACCCGAATTCAGGT    771
                     ...|.||||||.|.||..|.||||||||.||.|||||.||.|||||.|||
BL01781___mmu    725 GCATCAAAAAGCATACAGCTAAACCGATTATCGTCTATCCAAATTCCGGT    774

BSNT_00427___    772 GAGCAATATGATCCGGAAACAAAAACATGGAACGGCGCAGCATGCGCAGA    821
                     ||.||.|||||.||||||||.|||||||||.|.|||||.|||||...||.
BL01781___mmu    775 GAACAGTATGACCCGGAAACGAAAACATGGCATGGCGCGGCATGTAAAGC    824

BSNT_00427___    822 ATCTTACGGGGCGAGCGCCCGCACCTGGCATGAAAAAGGAGCGAGGCTGA    871
                     .||||.|||.|..||||||||||.||||.||.|..||||.||...|||||
BL01781___mmu    825 TTCTTTCGGAGAAAGCGCCCGCAGCTGGTATAACCAAGGGGCACAGCTGA    874

BSNT_00427___    872 TTGGGGGCTGCTGTCGGACAAAACCCGAAAATATTCAAGAAATTGCGGCT    921
                     |.||.||||||||..|.||||..||.||..|.||..|||...|.||.||.
BL01781___mmu    875 TCGGCGGCTGCTGCAGAACAACGCCTGAGGACATCAAAGCCGTCGCCGCC    924

BSNT_00427___    922 TGGGCCCGCTCTTTAAAAACAACTTGA-------    948
                     |||||          .|.|.|.||.||       
BL01781___mmu    925 TGGGC----------GAGAAAGCTGGAGGTATAA    948


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00427 and BL01781

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
