Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00459 and BL01779
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00459___ycbP.1.5803.seq
# -bsequence dna-align/BL01779___ycbP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00459___ycbP-BL01779___ycbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00459___ycbP-BL01779___ycbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00459___ycbP
# 2: BL01779___ycbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 406
# Identity: 265/406 (65.3%)
# Similarity: 265/406 (65.3%)
# Gaps: 44/406 (10.8%)
# Score: 820.0
#
#
#=======================================
BSNT_00459___ 1 ATGACACATGTGAAAGCGCTCGCTATTAAAGGTATTATGACGATTATTGT 50
|||..||||||||||||.||.||.||.|||||.||.|||||||||.|..|
BL01779___ycb 1 ATGGAACATGTGAAAGCCCTTGCCATCAAAGGCATCATGACGATTGTGAT 50
BSNT_00459___ 51 GTTGTATCTGGTGCTTGGTCTGGGCTTTGGTTTCACGTTTGGTGATACGC 100
..||||.||.||.||.||.||.||.|||.||||.|..||||...|.||.|
BL01779___ycb 51 TCTGTACCTTGTTCTAGGGCTCGGGTTTAGTTTTAGTTTTGAAAACACCC 100
BSNT_00459___ 101 TGCTAATGACGATTGTGTTAGGGGTTATTTCTTATTTGCTGGGCGATCTT 150
|..|.||.||||||||..|.||.|...|.||.|||||||||||.|| ||
BL01779___ycb 101 TATTCATCACGATTGTTCTTGGCGCAGTATCCTATTTGCTGGGTGA--TT 148
BSNT_00459___ 151 TATGTAT--TGCCGAGATGGAATAATATGATTGCAACTTTGGCTGATTTT 198
|.|.||| ||||||.|...||.||.||.|..||.|||||.||.|||||.
BL01779___ycb 149 TGTTTATTCTGCCGAAAACCAACAACATCACGGCCACTTTAGCCGATTTA 198
BSNT_00459___ 199 GGCTTGGCCTTTCTTGTGATCTGGCTGATGGGCATGCCGCTTTCCCTGGG 248
|||.|.||.||||||||..|.|||||||||| |.|||.|..||||
BL01779___ycb 199 GGCGTCGCTTTTCTTGTCGTTTGGCTGATGG------CTCTTGCGATGGG 242
BSNT_00459___ 249 GATGACTGGCGGTGAA----GTTGCGTTGGCGGCTTTATTCGGCGCAATC 294
.|.|.|||.| || |.|||.|||||.||.||.||.|..||..||
BL01779___ycb 243 AACGGCTGCC----AACACCGCTGCATTGGCCGCGTTTTTTGCAGCTGTC 288
BSNT_00459___ 295 GTCATGGCAATCGGTGAAT--ATTGCTTCCATTTCTATATGATGAGCAAA 342
|..|||||.|||||||||| ||| ||||||||.||..||||||..|||
BL01779___ycb 289 GCTATGGCGATCGGTGAATACATT--TTCCATTTTTACTTGATGAATAAA 336
BSNT_00459___ 343 GAGATTGGC-----------AAGAAGCATTATCTTGAAACAAGAACAGAC 381
|...||||| .|||| |.|||||.|||||.||
BL01779___ycb 337 GGCCTTGGCTCGCCCAACCGCAGAA--------TGGAAACGAGAACGGA- 377
BSNT_00459___ 382 TCATAA 387
||||
BL01779___ycb 378 --ATAA 381
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