Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00581 and BL01769
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_00581___nasD.1.5803.seq
# -bsequence dna-align/BL01769___nasD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00581___nasD-BL01769___nasD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00581___nasD-BL01769___nasD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00581___nasD
# 2: BL01769___nasD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2440
# Identity: 1911/2440 (78.3%)
# Similarity: 1911/2440 (78.3%)
# Gaps: 41/2440 ( 1.7%)
# Score: 7384.0
#
#
#=======================================
BSNT_00581___ 1 ATGGGAAAAAAA--CAGCTAGTTCTTGTTGGTAATGGAATGGCCGGGGTA 48
|.|||||||| |||||.||.|||||.||.||.||.|||||||||||.
BL01769___nas 1 --GTGAAAAAAAAGCAGCTTGTCCTTGTAGGGAACGGTATGGCCGGGGTC 48
BSNT_00581___ 49 AGGGCCATTGAAGAGATACTGAGTGTTGCTAAAGACGAGTTTCAGATCAC 98
||||||||||||||.||.||.|...||.|.||.||.||||||||||||||
BL01769___nas 49 AGGGCCATTGAAGAAATTCTTAAAATTTCAAACGAAGAGTTTCAGATCAC 98
BSNT_00581___ 99 AATTTTCGG-AGCCGAACCGCATCCCAATTACAACCGAATCCTTTTGTCA 147
.|||||||| || |||||||||.||.||.||.|||||.||.|||.|.||.
BL01769___nas 99 GATTTTCGGCAG-CGAACCGCACCCAAACTATAACCGGATTCTTCTTTCC 147
BSNT_00581___ 148 AAAGTGCTTCAAGGCGATACAGATATTAAAGATATTACGTTAAACGATTG 197
||||||||||||||.|||||.|||.||||.||.|||||..|.||.|||||
BL01769___nas 148 AAAGTGCTTCAAGGAGATACGGATGTTAAGGACATTACACTGAATGATTG 197
BSNT_00581___ 198 GGACTGGTACGAAGAAAACAACATTCAATTGTATACAAATGAAACAGTCA 247
|||.|||||.|||||||||..||||||..||||||||..||||..||||.
BL01769___nas 198 GGATTGGTATGAAGAAAACGGCATTCAGCTGTATACAGGTGAAGAAGTCG 247
BSNT_00581___ 248 TCAAAGTGGACACGGAAAACAAAACAGTCATCACAGATGCAGACAGAATC 297
|.|||||.||..||||...||||||.||||||||.|||.|.|..|||.||
BL01769___nas 248 TTAAAGTTGATCCGGAGTCCAAAACCGTCATCACGGATACGGGAAGAGTC 297
BSNT_00581___ 298 CAGCCTTACGACGAATTGATCCTGGCGACAGGCTCGCTCCCTTTTATCCT 347
|||||.||.||.|||.||||..||||||||||.||.|||||||||||.||
BL01769___nas 298 CAGCCGTATGATGAACTGATTTTGGCGACAGGTTCTCTCCCTTTTATTCT 347
BSNT_00581___ 348 TCCGATT-CCGGGCGCAGACAAAAAAGGCGTCACAGCTTTCCGGGACATA 396
.|| ||| ||.||.||.||.|||.||||.||.|||||||||||.||.||.
BL01769___nas 348 GCC-ATTGCCCGGAGCGGATAAAGAAGGTGTAACAGCTTTCCGTGATATC 396
BSNT_00581___ 397 AAAGATACAGACACAATGCTCACCGCGT-CAAAACAATATAAAAAAGCAG 445
||.|||||.||.|..||||||...||.| |||||| .||.||||||||||
BL01769___nas 397 AAGGATACGGATATCATGCTCGAAGCTTCCAAAAC-GTACAAAAAAGCAG 445
BSNT_00581___ 446 CCGTCATCGGCGGAGGACTTCTTGGTTTGGAAGCCGCTCGCGGACTGCTG 495
|.||.||||||||.||.||.||.||..|||||||.||.||||||||.||.
BL01769___nas 446 CAGTTATCGGCGGCGGGCTGCTGGGACTGGAAGCAGCGCGCGGACTTCTC 495
BSNT_00581___ 496 AATCTTGGCATGGACGTGTCCGTCATCCACCTCGCCCCATTCCTGATGGA 545
||.|||||||||||.||..||||..||||||||||.||||...|||||||
BL01769___nas 496 AACCTTGGCATGGATGTTACCGTTGTCCACCTCGCGCCATATTTGATGGA 545
BSNT_00581___ 546 GCGCCAGCTTGATGCAACGGCAGGACGCCTGCTGCAAAACGAGTTAGAAA 595
|||.||||||||||||.|.||||||||.||..|||||||.|||.|.||||
BL01769___nas 546 GCGTCAGCTTGATGCAGCCGCAGGACGGCTTTTGCAAAAAGAGCTGGAAA 595
BSNT_00581___ 596 AACAAGGTATGACCTTTTTACTTGAAAAGCAAACCGAAGAAATTGTTGGT 645
|.||.||.||||..||||||||.||||||||.||||||||||||...||.
BL01769___nas 596 AGCAGGGCATGAAATTTTTACTGGAAAAGCAGACCGAAGAAATTTACGGA 645
BSNT_00581___ 646 GACGATCGTGTCGAAGGCCTCCGTTTCAAGGATGGCACAA-GCATTGAAG 694
||....||||||||||||.|....|||||.||.|||.||| || ||||.|
BL01769___nas 646 GAAACACGTGTCGAAGGCTTAAAATTCAAAGACGGCTCAACGC-TTGAGG 694
BSNT_00581___ 695 CTGATTTAGTGGTCATGGCTGTCGGCATCCGCCCAAA--TACAACGCTCG 742
|.|||||.||.||||||||.|||||.|||...||.|| |.|| ||||
BL01769___nas 695 CCGATTTGGTCGTCATGGCGGTCGGAATCAAGCCGAACGTTCA--GCTC- 741
BSNT_00581___ 743 GGGCCGAGA--GCGGCATTCCGGTTAACCGCGGCATCATCGTCAATGATT 790
|||..||| |||||.|||||||.|||.|.||.|||.||||||||||||
BL01769___nas 742 -GGCAAAGACTGCGGCCTTCCGGTAAACAGAGGAATCGTCGTCAATGATT 790
BSNT_00581___ 791 ATATGCAGACTGAAATCCCGCACATTTACGCGGTCGGCGAATGTGCCGAG 840
|.|||.||||.|||.|.||..||||||||||.|||||.|||||.||.|||
BL01769___nas 791 ACATGGAGACCGAAGTTCCCAACATTTACGCTGTCGGAGAATGCGCGGAG 840
BSNT_00581___ 841 CACCGAGGAATCGCCTACGGGCTTGTGGCGCCGCTCTATGAACAGGCAAA 890
||..|.||.||.||||||||.|||||.|||||.||.||||||||||||||
BL01769___nas 841 CATAGGGGCATTGCCTACGGACTTGTCGCGCCTCTTTATGAACAGGCAAA 890
BSNT_00581___ 891 AGTGCTGGCGAAGCATATTTGCGGCATCGAAACAAACCCGTATGAGGGCT 940
||||||.||.||..|.||.||||||.|.|||||....||||||||.||.|
BL01769___nas 891 AGTGCTTGCCAAAAAAATCTGCGGCGTTGAAACGGCTCCGTATGAAGGAT 940
BSNT_00581___ 941 CCGTTCTCTCCACACAGTTAAAGGTATCGGGCGTCGAGGTTTTCTCTGCC 990
|.|||.|.||.||.|||.|.|||||.||.||.||.|||||.||.||||||
BL01769___nas 941 CTGTTTTATCTACCCAGCTGAAGGTTTCCGGTGTTGAGGTCTTTTCTGCC 990
BSNT_00581___ 991 GGGGACTTT------GATGAATCAGAGGACAAAAAAGCGATTAAAGTCTT 1034
||.|||||| |||||...|||.||||||||||||.|.|||||.||
BL01769___nas 991 GGTGACTTTAATGAGGATGACGGAGAAGACAAAAAAGCGCTCAAAGTGTT 1040
BSNT_00581___ 1035 CGATGAGCAGGACGGCATCTATAAAAAAATTGTCCTGAGAGACAACAAAA 1084
.||.||.||||||||.|||||.||||||||.||.|||.|.|.|||..|..
BL01769___nas 1041 TGACGAACAGGACGGAATCTACAAAAAAATCGTTCTGCGCGGCAATCAGG 1090
BSNT_00581___ 1085 TTGTCGGTGCTGTTTTATTCGGTGACAGCAGCGAAGGCAATCGCCTGTTT 1134
|..||||.||.||..|.|||||.||||||||||||||.||..|.||||||
BL01769___nas 1091 TGATCGGCGCCGTACTGTTCGGAGACAGCAGCGAAGGAAACAGGCTGTTT 1140
BSNT_00581___ 1135 TCTATGATTCAAAAAGAAGCCGATATCTCTGAAACCTCTAAAATATCAAT 1184
||.|||||||||||||.|||.|||||.|||||.||.||.|||||.|||||
BL01769___nas 1141 TCCATGATTCAAAAAGGAGCGGATATTTCTGATACTTCAAAAATTTCAAT 1190
BSNT_00581___ 1185 CTTACAGCCTCTCAACCAAGAAGCAGGCACAAGCATCACCGCAGCGATGA 1234
|||.||||||.|.||.||.||||.|||||..|||.|.|||||.|||||||
BL01769___nas 1191 CTTGCAGCCTTTGAATCAGGAAGAAGGCATGAGCTTGACCGCTGCGATGA 1240
BSNT_00581___ 1235 GCGACGATGAAATCATCTGCGGCTGTAACGGCGTGTCAAAAGGTGCGATT 1284
||||||||||.|||.|.||||||||.||||||||.||.|||||...|||.
BL01769___nas 1241 GCGACGATGAGATCGTGTGCGGCTGCAACGGCGTTTCGAAAGGAATGATC 1290
BSNT_00581___ 1285 ATTCAAGCCATACAGGAAAAGGGCTGCTCGTCAACGGACGAGATCAAAGC 1334
|||||.||.||..|.||..||||.|||.|.||.|||||.||.||.|||||
BL01769___nas 1291 ATTCAGGCGATCAAAGAGCAGGGATGCACATCGACGGATGAAATTAAAGC 1340
BSNT_00581___ 1335 ATGCACTGGCGCATCCCGCTCATGCGGAGGCTGTAAGCCACTCGTAGAAG 1384
||||||.||||||||.|||||.||||||||.||||||||.||.||.|.||
BL01769___nas 1341 ATGCACAGGCGCATCGCGCTCTTGCGGAGGATGTAAGCCGCTTGTCGCAG 1390
BSNT_00581___ 1385 AAATCCTCCAGCATACGCTCGGATCAGACTTTGATGCGTCAGCGCAAAAA 1434
|.||.|||||||||||||||||.|||||.||||||||.|||||.||||||
BL01769___nas 1391 AGATTCTCCAGCATACGCTCGGCTCAGAATTTGATGCTTCAGCACAAAAA 1440
BSNT_00581___ 1435 GAAGCCATTTGCGGCTGCAC-CACATTGTCAAGAGATGAAGTCGTAGAAG 1483
|||||.||||||||.||.|| .||.|| ||||||||.|||.||||.|..|
BL01769___nas 1441 GAAGCGATTTGCGGATGTACGGACCTT-TCAAGAGACGAACTCGTGGCCG 1489
BSNT_00581___ 1484 AAATCAAAGCCAAAGGGCTGTCACATACAAGAGAAGTCATGAATGTGCTC 1533
||||||.||..|||||||||.|.|||||||.||||||||||||.||||||
BL01769___nas 1490 AAATCAGAGAAAAAGGGCTGACCCATACAAAAGAAGTCATGAACGTGCTC 1539
BSNT_00581___ 1534 GGCTGGAAAACGCCAGAAGGCTGTTCCAAATGCCGGCCGGCTCTGAACTA 1583
||||||||||||.|.||||||||||||||||||||.||.||.||.|||||
BL01769___nas 1540 GGCTGGAAAACGGCGGAAGGCTGTTCCAAATGCCGCCCTGCGCTTAACTA 1589
BSNT_00581___ 1584 CTACTTAGGCATGATCAATCCAACCAAATACGAGGATGACCG-GACATCC 1632
||||.|.||||||||||||||.|...||||.||.|||||..| || ||||
BL01769___nas 1590 CTACCTCGGCATGATCAATCCGAAGGAATATGAAGATGAAAGAGA-ATCC 1638
BSNT_00581___ 1633 CGCTTTGTTAATGAACGAATGCACGCCAATATTCAAAAAGACGGAACATA 1682
|||||.||.||||||||.|||||||||||.||||||||||||||.|||||
BL01769___nas 1639 CGCTTCGTCAATGAACGGATGCACGCCAACATTCAAAAAGACGGCACATA 1688
BSNT_00581___ 1683 CTCAGTCGTTCCTCGGATGTACGGCGGCGTGACCAACTCCACAGATTTGC 1732
.||||||||.||.||||||||||||||.||.|||||.||.|..||.||||
BL01769___nas 1689 TTCAGTCGTACCGCGGATGTACGGCGGGGTCACCAATTCGAATGACTTGC 1738
BSNT_00581___ 1733 GCAAGATCGCCGATGTCGTTGACAAATATGAGATCCCGCTCGTGAAAATG 1782
|....||||||||||||||.|||||||||||.||.||.||.|||||||||
BL01769___nas 1739 GGCGCATCGCCGATGTCGTCGACAAATATGAAATTCCTCTAGTGAAAATG 1788
BSNT_00581___ 1783 ACAGGCGGCCAGCGAATTGATCTTATCGGCGTGAAAAAAGAAGACCTTCC 1832
||.|||||||||||.||.|||||.||||||||.||||||||.||.|||||
BL01769___nas 1789 ACCGGCGGCCAGCGGATCGATCTGATCGGCGTCAAAAAAGAGGATCTTCC 1838
BSNT_00581___ 1833 GAAGGTATGGGAAGATCTTGATATGCCGTCGGGCTACGCATACGGAAAAA 1882
|||.|||||||..||||||||.|||||.||.||.|..||.||||||||||
BL01769___nas 1839 GAAAGTATGGGCTGATCTTGACATGCCTTCTGGATTTGCTTACGGAAAAA 1888
BSNT_00581___ 1883 CGCTCCGCACAGTGAAAACATGTGTAGGCGAGCAATTCTGCCGCTTCGGC 1932
|||||.|.||.||.|||||.||.||||||||.||.||||||||||||||.
BL01769___nas 1889 CGCTCAGAACCGTAAAAACGTGCGTAGGCGAACAGTTCTGCCGCTTCGGA 1938
BSNT_00581___ 1933 ACACAAGACTCCATGGCACTGGGCATTGCGCTTGAGAAAAAATTCGAAGG 1982
||.|||||.||.|||||.||.||.||||..||||||||||||||.|||||
BL01769___nas 1939 ACGCAAGATTCAATGGCTCTCGGAATTGACCTTGAGAAAAAATTTGAAGG 1988
BSNT_00581___ 1983 GCTAAACACGCCGCACAAAGTCAAAATGGCCGTGTCTGCATGCCCGCGAA 2032
|||..|||||||.||||||.|.||||||||.||.||.||.||.|||.|||
BL01769___nas 1989 GCTCTACACGCCTCACAAAATTAAAATGGCGGTTTCCGCTTGTCCGAGAA 2038
BSNT_00581___ 2033 ACTGTGCGGAATCCGGCATTAAGGACCTTGGCGTTGTCGGCATCGACGGA 2082
|||||||.||||||||||||||.||..|.||||||||||||||||||||.
BL01769___nas 2039 ACTGTGCTGAATCCGGCATTAAAGATATCGGCGTTGTCGGCATCGACGGC 2088
BSNT_00581___ 2083 GGCTGGGAGCTTTATGTCGGCGGAAACGGCGGAACCCACTTGCGTGCCGG 2132
||||||||..||||.||||||||||||||.||.||.||..|||||||.||
BL01769___nas 2089 GGCTGGGAAATTTACGTCGGCGGAAACGGAGGCACACATCTGCGTGCAGG 2138
BSNT_00581___ 2133 CGATTTGCTGATGAAGGTGAAAACAAATGAAGAAGTCTTAGAATACGCAG 2182
||||.||.|.|||||.||.|||||...||||||||||.|.|||..|.|||
BL01769___nas 2139 CGATCTGTTAATGAAAGTCAAAACGGCTGAAGAAGTCATCGAAATCACAG 2188
BSNT_00581___ 2183 GCGCTTACCTGCAATATTACAGGGAAACCGCAAACTATCTGGAGCGTACG 2232
||||.||.||.|||||.||..|.|||||.||.||||||.|.|||||.||.
BL01769___nas 2189 GCGCATATCTCCAATACTATCGTGAAACAGCCAACTATTTAGAGCGGACA 2238
BSNT_00581___ 2233 TCCGCATGGCTTGAGCGCGTCGGTTTATCCCATGTCCAATCCGTGTTAAA 2282
||.||||||.|.||.||.|||||.||.|||||.|||||||||||.||.||
BL01769___nas 2239 TCTGCATGGATCGAACGTGTCGGCTTGTCCCACGTCCAATCCGTATTGAA 2288
BSNT_00581___ 2283 CGATCCGGAAAAGCGGCAGGAGCTGAACGACCGAATGAATGAAACACTCT 2332
.|||...|||||.||..|.||||||||.|||||.||.|||.||.|.||.|
BL01769___nas 2289 TGATAAAGAAAAACGCAAAGAGCTGAATGACCGCATCAATCAAGCGCTGT 2338
BSNT_00581___ 2333 CTGTCCACAAGGATCCGTGGAAAGACTTTTTAGA----GGATAAACAAAC 2378
|||||||.||.||.|||||||||||||||||.|| |||.|.||||
BL01769___nas 2339 CTGTCCATAAAGACCCGTGGAAAGACTTTTTGGAAGACGGAAAGACAA-- 2386
BSNT_00581___ 2379 CTCGAAAGAATTATTTGAAAATGTCGTGACCACATCATAA 2418
|.|.|.|..||||.||||||||.|| |||.||.|||
BL01769___nas 2387 --CAAGACAGCTATTCGAAAATGTTGT---CACTTCCTAA 2421
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