Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00583 and BL01767
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_00583___nasB.1.5803.seq
# -bsequence dna-align/BL01767___nasB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00583___nasB-BL01767___nasB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00583___nasB-BL01767___nasB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00583___nasB
# 2: BL01767___nasB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2549
# Identity: 1530/2549 (60.0%)
# Similarity: 1530/2549 (60.0%)
# Gaps: 487/2549 (19.1%)
# Score: 4103.0
#
#
#=======================================
BSNT_00583___ 1 ATGAAGAAACAAAGATTAGTGTTAGCGGGAAACGGCATGGCCGGAATCCG 50
|||..|||||||||..|.||.|||...||||||||||||||.||..|.||
BL01767___nas 1 ATGGGGAAACAAAGGCTTGTTTTAATAGGAAACGGCATGGCAGGGGTTCG 50
BSNT_00583___ 51 CTGTATTGAAGAAG-TATTAAAGCTGAATCGCCACA-----------TGT 88
| |..|..|||| .||| ||.|.||| .||
BL01767___nas 51 C---ACGGCCGAAGAGATT---------TCACTACACGGCGGGAGCCGGT 88
BSNT_00583___ 89 TTGAGATTGTCATTTTCGGAAGCGAGCCGCATCCCAATTACAATCGCATT 138
|||||||.|||||..||||.|||||.||.||.||....||.||.||.|||
BL01767___nas 89 TTGAGATCGTCATCATCGGCAGCGAACCACACCCGGGCTATAACCGGATT 138
BSNT_00583___ 139 CTCTTATCCTCTGTATTGCAGGGTGAAGCGTCACT----CGATGATATTA 184
||..|.||.|||||..|.|||||.|||.|| .|.| |||||..||.|
BL01767___nas 139 CTGCTGTCTTCTGTCCTTCAGGGAGAAACG-GATTGGAACGATGTGATGA 187
BSNT_00583___ 185 CACTGAACAGCAAGGA-TTGGTACGACAAGCACGGGATCACGCTTTACAC 233
|| ||.||| .||| .|||||.||..|..|||||||.||.|||||.||
BL01767___nas 188 CA---AAAAGC-CGGAGCTGGTATGAAGAAAACGGGATTACCCTTTATAC 233
BSNT_00583___ 234 AGGCGAAACGGTTAT-TCAGATTGATACAGATCAGCAGCAGGTCATCACA 282
|||.|||||||.|.| .|| ||.|||||.|.|.|.||...|||....|||
BL01767___nas 234 AGGGGAAACGGCTGTCGCA-ATCGATACGGTTAATCAAACGGTGGCGACA 282
BSNT_00583___ 283 GATCGGAAACGC--ACTCTGTCGTATGACAAATTAATAGTGGCAACAGGC 330
||||..||.||| |.|| .|.|||||||||.|.||..|.||.||.|||
BL01767___nas 283 GATCAAAACCGCGAAATC--GCTTATGACAAACTGATCATTGCGACGGGC 330
BSNT_00583___ 331 TCCTCCCCTCATATTCTCCCTATCCCCGGGGCAGACAAAAAAGGTGTCTA 380
||.|||||...|||.|||||..|.|..||.|||||||||.||||.||.||
BL01767___nas 331 TCTTCCCCGTTTATCCTCCCGGTTCATGGTGCAGACAAAGAAGGGGTATA 380
BSNT_00583___ 381 TGGATTTCGGACAATAGAAGACTGCCAAGCGCTGATGAA--CATGGCCCA 428
|||.|||.|.||||||||.||.||||..||..|.||.|| ||| |..|
BL01767___nas 381 TGGTTTTAGAACAATAGACGATTGCCGGGCATTCATAAACGCAT--CAAA 428
BSNT_00583___ 429 GCACTTTCAAAAGGCTGCGGTAATCGGAGCCGGCTTATTAGGACTGGAAG 478
||..|||.||||.||.||.||.|||||.|..||..||||.||.||.||.|
BL01767___nas 429 GCGATTTAAAAAAGCGGCCGTCATCGGCGGGGGAATATTGGGCCTTGAGG 478
BSNT_00583___ 479 CTGCAGTAGGTTTACAGC--ATCTCGGTATGGATGTCAGCGTCATTCACC 526
|.||....||.|| .|| |.|||||.|||.|.||....||..||||||
BL01767___nas 479 CGGCGCGGGGATT--GGCAAACCTCGGGATGAAGGTTGATGTGGTTCACC 526
BSNT_00583___ 527 ACTCCGCCGGCATTATGCAAAAACAGCTCGATCAAACAGCGGC-GCGGC- 574
||||..||..|||.|||||.|..|||||.|||| |..|||| .|.||
BL01767___nas 527 ACTCTTCCTCCATCATGCAGACTCAGCTTGATC---CGCCGGCTTCTGCC 573
BSNT_00583___ 575 -TGCTGCAAACAGAGCTGGAACAAAAAGGCCTAACC--TTTCTTTTGGAG 621
||||.||.|.|||||||||.|...|||| .|.|| ||||||||||||
BL01767___nas 574 ATGCTCCAGAAAGAGCTGGAGCGTCAAGG--GATCCATTTTCTTTTGGAG 621
BSNT_00583___ 622 AAAGACACCGTCTCCATTTCCG-------GCGCCACGAAG----GCAGAC 660
|||||.||.|...|.||||..| ||||..|||.| ||.|
BL01767___nas 622 AAAGATACAGAGGCGATTTTAGGAACATCGCGCGCCGAGGGTGTGCGG-- 669
BSNT_00583___ 661 CGAATCCATTTTAAAGATGGCTCTTCATTAAAAGCAG------ACTTGAT 704
||||||||.|| .|..||.|.||| .||.| |
BL01767___nas 670 ---------TTTAAAGACGG-----GACGAAGATCAGCGCCGATCTCG-T 704
BSNT_00583___ 705 TGTGATGGCGGCCGGCGTCAAACCGAATATTGAATTG----------GCT 744
.||.|||||.|||||.||||.|||||||||.|||.|| ||.
BL01767___nas 705 CGTCATGGCTGCCGGTGTCAGACCGAATATCGAACTGGCCAAGGCGAGCG 754
BSNT_00583___ 745 GTATCCGCTGGAATCAAAGTGAACCGCGGGATCATCGTGAATGACTTCAT 794
|||| .|||| ..|||.|.|.|||||||||.|..||||..||
BL01767___nas 755 GTAT--------TTCAA--CCAACAGGGCGATCATCGTCAGCGACTATAT 794
BSNT_00583___ 795 GCAGACAAGCGAACCGAATATCTACGCCGTTGGTGAATGCGCTGAGCATA 844
|.||||||..|..||.|||.||||||||||.|||||||||||.|||||||
BL01767___nas 795 GGAGACAAATGTTCCAAATGTCTACGCCGTCGGTGAATGCGCGGAGCATA 844
BSNT_00583___ 845 ACGGAACGGTGTACGGATTGGTGGCTCCGCTTTATGAGCAGGGAAAAGCG 894
||||||||||.|||||.||.||....||.||.|||||||||||.||||.|
BL01767___nas 845 ACGGAACGGTCTACGGCTTAGTCAAGCCACTGTATGAGCAGGGGAAAGTG 894
BSNT_00583___ 895 CTCGCCAGTCATATTTGCGGC-------GTTCCATGTGAGGAATATCAAG 937
||.||||..|||||||||||| ||||| |..|||||.|
BL01767___nas 895 CTGGCCAAACATATTTGCGGCCTCGAATGTTCC-------GGTTATCAGG 937
BSNT_00583___ 938 GCTCAGCACCATCAGCGGCGTTAAAAATAGCTGGAATCGATGTGTGGTCA 987
||||.|..|..||.|||||.||||||||..|.||||||||.||.|..||.
BL01767___nas 938 GCTCCGTTCAGTCCGCGGCTTTAAAAATGTCCGGAATCGACGTCTTTTCG 987
BSNT_00583___ 988 GCAGGAAAGATCCAAGAGGATGAACGCACGACGA--GC-ATCAAAATCTA 1034
|||||.||.|||..||||||.|| |.|||||| || ||.|||.|.|.
BL01767___nas 988 GCAGGGAAAATCACAGAGGACGA---CTCGACGACGGCTATTAAACTTTT 1034
BSNT_00583___ 1035 CGACGAACAAGCAGGCGTTTATAAAAAAGCGCTTTTTGTAGATGAAAAAC 1084
.||||||...||.||.||.||||||||||||.|.|||..||..||.|||.
BL01767___nas 1035 AGACGAAGCGGCCGGAGTCTATAAAAAAGCGGTCTTTCAAGGGGATAAAA 1084
BSNT_00583___ 1085 TGGCCGGCGTTATTTTATTCGGAGACACCCGTGACAAGCAGC----GGCT 1130
||||||||||.|||||||.||||||||||.|.| ||||| ||||
BL01767___nas 1085 TGGCCGGCGTCATTTTATACGGAGACACCAGCG----GCAGCCAAAGGCT 1130
BSNT_00583___ 1131 TCTCGACAGCCTCCTTAAACAACGAGACATCTCCATTGTCAAAAAGCAGA 1180
..|.||.|||.||.|.||||||.|.||.||..||.|||||||||| |||
BL01767___nas 1131 GTTGGAAAGCATCATCAAACAAAGGGATATTACCGTTGTCAAAAA--AGA 1178
BSNT_00583___ 1181 TC-------ATCGAACCGG-AGACAAGCGGCCCTTTATTTGAATCCATGC 1222
.| ||||.| || ||||| .||.|.|.|..||.|||.
BL01767___nas 1179 GCTGTTTCAATCGGA--GGAAGACA-------GTTCAGTCGCTTCTATGG 1219
BSNT_00583___ 1223 C--TTCCAGTGAAACGATTTGCCAATGCAACACAGTGACGAAAGGCGCGA 1270
| ||| ||||||||||.||||||||||||.|.||..|.||||||..||
BL01767___nas 1220 CGGTTC--GTGAAACGATCTGCCAATGCAACGCGGTTTCAAAAGGCATGA 1267
BSNT_00583___ 1271 T--TGAAGAAGCGGTGCACACGAATAGCTTAACAACTGTTGAGGAAGTCA 1318
| || ||||||.|.||.|||.|..|.||||..||.|..|||||.||||
BL01767___nas 1268 TCATG--GAAGCGATACAGACGCACGGTTTAAAGACGGCCGAGGAGGTCA 1315
BSNT_00583___ 1319 AGCACTGCACCAAAGCCACTGGGTCCTGCGGAGGATGCAAACCGCTCGTT 1368
|.|.|||.||.|||||..|.|||||.|||||.||.||||..|||.|.||.
BL01767___nas 1316 AACGCTGTACAAAAGCTTCCGGGTCATGCGGCGGCTGCAGGCCGTTGGTC 1365
BSNT_00583___ 1369 GAAGACCTTTTGAGGCACATGACCA-ACAG-CGAATAT-------ACGAA 1409
||.||.|| ||.|.| ||| ||.| ||||.|| ||..|
BL01767___nas 1366 GAGGAACT------GCTCCT--CCATACCGCCGAACATGATGGTCACATA 1407
BSNT_00583___ 1410 GC-CCGCCGGCACACCTTCGTTTTGCAGCTGTACTGATTTTACAGAAG-- 1456
.| .||.|||.|||.| ||.|.|||..|||.|||...||.||.||||
BL01767___nas 1408 TCTGCGGCGGAACAAC--CGATGTGCGCCTGCACTTCATTCACGGAAGAT 1455
BSNT_00583___ 1457 ----------ACGACAT-CATCGCTGAG--------CTTCAGCGCAGGCC 1487
||||.|| || |.|||| ||| ||
BL01767___nas 1456 GAAGTCGTGAACGAAATACA--GATGAGAAATCTTTCTT---------CC 1494
BSNT_00583___ 1488 ATTCAC----TAATC-CGGCAGAAGTGATGAACCAGCTTGACTGGAAAAC 1532
.||||| |.||| |||| |||.|.||||||||.
BL01767___nas 1495 GTTCACGAAGTCATCTCGGC---------------GCTCGGCTGGAAAAA 1529
BSNT_00583___ 1533 AAAAAACGGATGCAGTACTTGTGTTCCTGCGATTCAATACTATCTGGAAA 1582
.|..|.|||||||.|.|.|||.||.||.|||.||||.||||||.|..|||
BL01767___nas 1530 TAGCAGCGGATGCCGGATTTGCGTGCCCGCGCTTCACTACTATTTAAAAA 1579
BSNT_00583___ 1583 TGCTGTACCCTGGGTTTGTCCAGCC--------TGAGCCAGCCACTGAA- 1623
|| |.|| ||||.|.| |||| .|| ||| |||
BL01767___nas 1580 TG----ATCC-------GTCCGGACATCGCCTATGAG-GAG-CAC-GAAG 1615
BSNT_00583___ 1624 --GAGAC--ATG-CATCCTGATCCCGCAAATGTACGGCGGGCGGACAAAC 1668
||||| ||| |||| |||||||||||||||||.||.|||||.||.
BL01767___nas 1616 AGGAGACGGATGCCATC---ATCCCGCAAATGTACGGAGGCCGGACGAAT 1662
BSNT_00583___ 1669 GCGGAGCAGCT-AAGAACCATCGC----CAACA-TCATTGAGGCATA-CA 1711
||.||..|||| ||| ||| ||..| |.|||||...||| ||
BL01767___nas 1663 GCCGAAGAGCTGAAG------CGCATTGCAGGAGTGATTGAAAAATATCA 1706
BSNT_00583___ 1712 GCATTCCCGACGTATCCATCACTCACGGCCAAAGGCTGAAGCTTTCCGGG 1761
.||||..||.||.|.|||.||.|||...||.||..|.||||||.||||.
BL01767___nas 1707 -AATTCAAGAGGTGTACATGACACACCATCAGAGATTAAAGCTTGCCGGC 1755
BSNT_00583___ 1762 ATCAAGCCTGCGGATCT----CCCGAACATAAAAAAAGACCTGAAGATGC 1807
||||||||.|.|.||.| |.|| |.|||.||||.||....|||
BL01767___nas 1756 ATCAAGCCGGAGCATATAGAGCGCG----TGAAAGAAGAACTCGGCATG- 1800
BSNT_00583___ 1808 CCGT-TTACACTAATGAACACCGACACGCGCTGCAA-AGCA--------- 1846
|||| ||.| || ||.|||| ||||
BL01767___nas 1801 CCGTATTGC-CT-----------------GCCGCAACAGCAGCGGATCGC 1832
BSNT_00583___ 1847 -----TCAAAGCATGTACATGCGGGCAAAATCGATCA------ATTCAGC 1885
|.|||.|.||..|||||| ||||| |||||
BL01767___nas 1833 CGCGGTTAAAACGTGCCCATGCG---------GATCACCGCAGATTCA-- 1871
BSNT_00583___ 1886 AGC--TGGCAGCCCAAATCGAAAGA-CAACTTGAG-ATGCTTCC-CTTAC 1930
|.| |||||||..|..|.||||.| ||.| || ||.|.||| |.|.|
BL01767___nas 1872 AACATTGGCAGCAGACTTGGAAAAAGCAGC---AGAATCCCTCCTCATTC 1918
BSNT_00583___ 1931 CCGC-----TC-CCATT------TCTATCAGCTT-----ATCATGTGAAA 1963
|.|| || ||||| ||...|.|.|| ||...|||.|
BL01767___nas 1919 CGGCCAAGGTCTCCATTGGGGTGTCGGGCTGTTTGGACGATTGCGTGTA- 1967
BSNT_00583___ 1964 CAGACTGCACCGATGCCGCCCTGCAAGATGTCGG----CGCAATTCGGAG 2009
||.|.|.| |.||.||..|||| |.||| ||
BL01767___nas 1968 ----------CGCTTCAG---TTCATGACATCGGACTTCTCAA-----AG 1999
BSNT_00583___ 2010 -ACAAGCTGGCTGGGACATTCACATCGGC-GGCGTCC---GGGGAACTCA 2054
|.|.|..||.|||||.||| |..|| ||||.|| |.|||...||
BL01767___nas 2000 TAAACGGAGGATGGGAGATT----TATGCGGGCGGCCAAGGAGGACAGCA 2045
BSNT_00583___ 2055 TG----CCCGTTCAGGAGCTTTGTTTTGCGT----GACT--GAGAACGAA 2094
|| |||| ||||...||.|||..|| |||| |.|.|.|||
BL01767___nas 2046 TGCTTCCCCG----GGAGAGCTGCTTTCAGTAGCCGACTCGGCGGAGGAA 2091
BSNT_00583___ 2095 GACAGCACTGCCGG-------CATGATCAAAGGACTGATCCAGTATTATC 2137
| ||| |||| |||||.|||.|.||.|||||.|
BL01767___nas 2092 G----------CGGGTGAACTCATG---AAAGGCCTGCTTCAATATTACC 2128
BSNT_00583___ 2138 GGGAAACGGCTCATTA-CTT-AGAAGGTGTTCAT----CAGTGGATAGAC 2181
|.|||||.||..|.|| ||| ||||| || ||.|||||.||.
BL01767___nas 2129 GCGAAACAGCAAACTATCTTGAGAAG------ATCGGGCATTGGATTGAA 2172
BSNT_00583___ 2182 CGTCTCGGGATCGTTCATATCAGAGAAGTGCTATTCGAAGAA--GACCTA 2229
||...|||.|||.||||||||.|.|||||..||||.| |.|| |||.|.
BL01767___nas 2173 CGCGCCGGCATCATTCATATCCGGGAAGTTTTATTTG-ACAACGGACTTC 2221
BSNT_00583___ 2230 AGGGCACAGCTGCTGGAAAGCCTCCAAACAGATCTGTCACTGATTCAAAA 2279
..||| ||||||.|.|||.|.||..|||.|| |||
BL01767___nas 2222 GCGGC-CAGCTGTTCGAACGGCTTGAAAAAG----------------AAA 2254
BSNT_00583___ 2280 CCCGACTG-------TAGAGACGGGTGCATATAAGAAAGGATGA----- 2316
..||.||| .|||.|.| |||| ||.||.|||
BL01767___nas 2255 AGCGGCTGGCTCAGCAAGAAATG-------ATAA-AAGGGCTGATGTGA 2295
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