Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00686 and BL01762
See
Amino acid alignment /
Visit
BSNT_00686 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00686___gabT.1.5803.seq
# -bsequence dna-align/BL01762___gabT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00686___gabT-BL01762___gabT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00686___gabT-BL01762___gabT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00686___gabT
# 2: BL01762___gabT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity: 1007/1335 (75.4%)
# Similarity: 1007/1335 (75.4%)
# Gaps: 45/1335 ( 3.4%)
# Score: 3672.0
#
#
#=======================================
BSNT_00686___ 1 ATGAGTC---AAACAACAGTAAGCA-TAACAACTGCACAATGGCAGCAAA 46
||||||| |.|||| ||||| |.|||||.|.|.|.||||||...|
BL01762___gab 1 ATGAGTCGGAACACAA----AAGCATTCACAACGGAAGATTGGCAGGCCA 46
BSNT_00686___ 47 AACGGGATCAATTTGTGTCAAAAGGTGTGAGCAACGGCAACCG-CAGTCT 95
|||||||||||||.|||.|||..|||||...||||||.||.|| || |||
BL01762___gab 47 AACGGGATCAATTCGTGGCAAGGGGTGTCTCCAACGGAAATCGTCA-TCT 95
BSNT_00686___ 96 GGCGGTCAAAGGAGAAGGGGCCGAGCTGTACGATCTGGATGGCCGGAGAT 145
|||.|..|||||.|||||.||||...|.||.|||.|.||.||.||..|.|
BL01762___gab 96 GGCCGCTAAAGGGGAAGGTGCCGTTTTATATGATATTGACGGACGCCGTT 145
BSNT_00686___ 146 TTATTGATTTTGCAGGCGCCATCGGCACGTTAAATGTCGGACACTCGCAT 195
||||.||||||||.||.||.||||||||.|||||||||||.||.||.|||
BL01762___gab 146 TTATCGATTTTGCCGGGGCGATCGGCACATTAAATGTCGGGCATTCACAT 195
BSNT_00686___ 196 CCGAAGGTGGTTGAGGCTGTGAAGCGGCAGGCGGAGGAGCTGATTCATCC 245
|||||.||.||.||.|||||.|||||||||||.||..||||.||.|||||
BL01762___gab 196 CCGAAAGTTGTAGAAGCTGTCAAGCGGCAGGCCGAACAGCTCATCCATCC 245
BSNT_00686___ 246 TGGTTTTAATGTCATGATGTACCCGACTTATATCGAGTTAGCCGAAAAAC 295
.||||||||.|||||||||||.|||.|.|||.|.||.||.||.|||||.|
BL01762___gab 246 CGGTTTTAACGTCATGATGTATCCGGCCTATTTGGAATTGGCGGAAAAGC 295
BSNT_00686___ 296 TGTG-TGGCATTGCACCGGGCAGCCATGAGAAAAAAGCGATTTTTCTTAA 344
|.|| .||| ||||.||||||..|||||||||||||||||||||.||.||
BL01762___gab 296 TTTGCCGGC-TTGCGCCGGGCGCCCATGAGAAAAAAGCGATTTTCCTGAA 344
BSNT_00686___ 345 CTCAGGGGCGGAAGCAGTCGAAAACGCTGTGAAAATCGCCAGAAGGTATA 394
|||.||.||||||||.||.||||||||.||||||||||||||||..||||
BL01762___gab 345 CTCGGGTGCGGAAGCCGTAGAAAACGCCGTGAAAATCGCCAGAAAATATA 394
BSNT_00686___ 395 CAAAGCGCCAAGGCGTTGTCTCGTTTACACGCGGGTTTCACGGGCGCACG 444
|.|||||.||||.|||.||.||.|||||.|||||.||.|||||.|||||.
BL01762___gab 395 CGAAGCGTCAAGCCGTCGTTTCTTTTACCCGCGGATTCCACGGACGCACA 444
BSNT_00686___ 445 AATATGACGATGAGCATGACAAGCAAGGTAAAACCTTATAAATTCGGTTT 494
||.|||||||||||||||||.||||||||.|||||.||.||||||||.||
BL01762___gab 445 AACATGACGATGAGCATGACGAGCAAGGTGAAACCGTACAAATTCGGATT 494
BSNT_00686___ 495 CGGACCTTTTGCGCCAGAGGTTTATCAAGCGCCGTTCCCTTATTATTATC 544
|||.||||||||.||.|||||.|||||.||||||||.|||||.||.|||
BL01762___gab 495 CGGTCCTTTTGCACCCGAGGTATATCAGGCGCCGTTTCCTTACTACTAT- 543
BSNT_00686___ 545 AG-AAGCCGGCCGGCATGAGTGATGAAAGCTATGACGATATGGTCATTCA 593
|| |||||.|..||.||||.|||||||||||||||.||.|||||.|||||
BL01762___gab 544 AGAAAGCCTGAAGGGATGACTGATGAAAGCTATGATGACATGGTTATTCA 593
BSNT_00686___ 594 AGCATTCAATGATTTCTTTATCGCTTCAGTGGCGCCTGAAACGGTGGCGT 643
.||.||..|.||||||||..||.|.||.||.||.||.||.|||||.||.|
BL01762___gab 594 GGCGTTTGACGATTTCTTCGTCTCGTCTGTTGCTCCGGAGACGGTTGCTT 643
BSNT_00686___ 644 GTGTCGTGATGGAGCCAGTGCAGGGAGAAGGCGGATTTATTATTCCTTCG 693
|.|||||.||||||||.||.||||||||||||||.|||||.||||||||.
BL01762___gab 644 GCGTCGTCATGGAGCCGGTACAGGGAGAAGGCGGTTTTATCATTCCTTCA 693
BSNT_00686___ 694 AAACGGTTCGTACAGCACGTCGCTTCATTCTGCAAAGAACACGGCATTGT 743
||||||||.||.|||||.|||||..|.||||||.||.||||||||||.||
BL01762___gab 694 AAACGGTTTGTGCAGCATGTCGCAGCCTTCTGCCAAAAACACGGCATCGT 743
BSNT_00686___ 744 TTTTGTTGCTGATGAAATCCAAACCGGCTTTGCCAGAACTGGCACTTATT 793
||||||.||||||||.||.|||||.||||||||||||||.||||..||||
BL01762___gab 744 TTTTGTCGCTGATGAGATTCAAACAGGCTTTGCCAGAACGGGCAAATATT 793
BSNT_00686___ 794 TCGCAATTGAGCACTTTGATGTAGTGCCCGATCTGATCACGGTTTCTAAA 843
|.||.||||||||.||||||||.||.||.|||||..|.||.||.||.|||
BL01762___gab 794 TTGCGATTGAGCATTTTGATGTCGTTCCTGATCTTGTGACAGTGTCAAAA 843
BSNT_00686___ 844 TCGCTTGCGGCAGGCCTGCCATTAAGCGGTGTGATTGGGCGTGCGGAAAT 893
|||||.||.||.|||.|.||..|.|||||.||.||.||.||.||||||||
BL01762___gab 844 TCGCTGGCTGCCGGCGTTCCGCTCAGCGGCGTCATCGGCCGGGCGGAAAT 893
BSNT_00686___ 894 GCTTGATGCGGCAGCGCCAGGGGAGCTGGGCGGCACGTATGCCGGCAGCC 943
|||.||||||||.|..||.||.||.||.||.|||||.||.|||||.||.|
BL01762___gab 894 GCTCGATGCGGCGGATCCGGGTGAACTCGGGGGCACCTACGCCGGAAGTC 943
BSNT_00686___ 944 CGCTCGGCTGCGCGGCGGCTTTGGCAGTCTTGGATATTATTGAAGAAGAA 993
||||.||.||||..||.|||||||||||..|.||||||||.|||...|||
BL01762___gab 944 CGCTTGGATGCGTAGCCGCTTTGGCAGTGCTCGATATTATCGAATCGGAA 993
BSNT_00686___ 994 GGACTGAATGAGCGATCTGAAGAAATTGGCAAAATCATTGAAGACAAGGC 1043
...||.||..||||.|||||||||||.||||||..|||.|||||...|||
BL01762___gab 994 CAGCTCAACAAGCGCTCTGAAGAAATCGGCAAAGCCATCGAAGAGCGGGC 1043
BSNT_00686___ 1044 GTATGAGTGGAAACAAG-AATTCCCGTTCATCGGTGACATCCGCAGACTC 1092
|..|||.||| ||.|.| |||..|||...||.||.||..|||||.||||.
BL01762___gab 1044 GCTTGAATGG-AAGATGAAATATCCGCAGATTGGGGAAGTCCGCCGACTT 1092
BSNT_00686___ 1093 GGGGCGATGGCCGCAATCGAAATCGTCAAGGATCCTGACACGCGTGAGCC 1142
||.||.|||||.||.||.|||||.|||..|||.....|.|||||.|||||
BL01762___gab 1093 GGCGCAATGGCTGCGATTGAAATTGTCCGGGACGAAAAGACGCGGGAGCC 1142
BSNT_00686___ 1143 TGATAAGGCAAAAGCAGCAGC---GATCGCGGCCTATGCGAATCAAAACG 1189
.||.||.|| |||.||.|| |||.||....||.||.|||.||.|||
BL01762___gab 1143 GGACAAAGC---AGCTGCGGCCAAGATTGCCAAGTACGCCAATGAACACG 1189
BSNT_00686___ 1190 GATTACTTTTGCTGACAGCGGGAATTAACGGTAATATCATCCGCTTTTTG 1239
|..|.||.|||.||||.||.||.||.|||||.||.||.|||||.|||.||
BL01762___gab 1190 GTCTGCTCTTGTTGACGGCAGGGATCAACGGCAACATTATCCGTTTTCTG 1239
BSNT_00686___ 1240 ACACCGCTCGTCAT--CTCA-GACAGCCTATTA---AATGAAGGGCTCAG 1283
.|.||||||||||| ||.| || |||| .|.||||||.||.|
BL01762___gab 1240 TCTCCGCTCGTCATTACTGATGA------ATTACTTGAGGAAGGGTTCGG 1283
BSNT_00686___ 1284 CATC-TTG--GAGGCGGGCCTGCG---AGCTTAA- 1311
|||| ||| ||.||| ||| | ||||..|
BL01762___gab 1284 CATCATTGAAGAAGCG---CTG-GAACAGCTCTAG 1314
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.