Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00683 and BL01761

See Amino acid alignment / Visit BSNT_00683 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence dna-align/BSNT_00683___yczG.1.5803.seq
#    -bsequence dna-align/BL01761___yczG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00683___yczG-BL01761___yczG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00683___yczG-BL01761___yczG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00683___yczG
# 2: BL01761___yczG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     208/330 (63.0%)
# Similarity:   208/330 (63.0%)
# Gaps:          48/330 (14.5%)
# Score: 577.5
# 
#
#=======================================

BSNT_00683___      1 ATGAACATTCCAAACCATCCAGAAACAGAAACATTGCAGCTGACAAAGGT     50
                     ||||       ||||        ||..||||   ||.||.|.|||...||
BL01761___ycz      1 ATGA-------AAAC--------AAATGAAA---TGAAGTTAACAGCCGT     32

BSNT_00683___     51 TCTTCATGCACTT-AGTGATCC------GCTTCGTTTAGAGCTCGTC-AA     92
                     |||.||.|| ||| ||||||||      ||||      |||.|.||| ||
BL01761___ycz     33 TCTCCAAGC-CTTGAGTGATCCTTACAGGCTT------GAGATTGTCAAA     75

BSNT_00683___     93 GCAATTAGCTGAAGCAAAAGAAAAAACGTGCAGCACCTGTGCAGATGTGC    142
                     || |||.|||||..||...||.|||||||||.|.||.||..||.||.|..
BL01761___ycz     76 GC-ATTGGCTGACACAGCCGAGAAAACGTGCGGTACGTGCACAAATCTCA    124

BSNT_00683___    143 AGGTTGCCAAATCGACTTTGTCGCATCATTTTAAAGTTTTGAGAGAATCG    192
                     |..||||.||.||.||..||||.||.||.||.||.||..||||.|||.||
BL01761___ycz    125 ATATTGCAAAGTCTACGCTGTCCCACCACTTCAAGGTGCTGAGGGAAGCG    174

BSNT_00683___    193 GGCATC-GCTC-AAGTTCGGATAGAAGGAAAGCGCCGGTATTATTCGCTT    240
                     ||  || |||| ||||.||.||.|||||.||||..|..|||||.||.|| 
BL01761___ycz    175 GG--TCTGCTCAAAGTCCGCATCGAAGGGAAGCATCATTATTACTCCCT-    221

BSNT_00683___    241 CGCGCTGAAGAC----CTTGAAAAGGCA-TTTCCGGGCCTGCTTGAAGCC    285
                         |||.|.||    .|||.|...||| ||||||||.|||.|.||.||.
BL01761___ycz    222 ----CTGCAAACGGGAATTGGAGGAGCAGTTTCCGGGACTGATCGAGGCG    267

BSNT_00683___    286 GTGCTGAATGTAGACCAGGACCGCTGGTGA    315
                     ||.||.||.|||||..||||.||.||||.|
BL01761___ycz    268 GTTCTCAAGGTAGAAAAGGAACGGTGGTAA    297


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