Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00676 and BL01759

See Amino acid alignment / Visit BSNT_00676 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence dna-align/BSNT_00676___yclP.1.5803.seq
#    -bsequence dna-align/BL01759___yclP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00676___yclP-BL01759___yclP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00676___yclP-BL01759___yclP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00676___yclP
# 2: BL01759___yclP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 779
# Identity:     547/779 (70.2%)
# Similarity:   547/779 (70.2%)
# Gaps:          40/779 ( 5.1%)
# Score: 1835.0
# 
#
#=======================================

BSNT_00676___      1 ATGGTAGAGGTCAGAAATGTAAGCAAACAATATGGCG---GGAAAGTTGT     47
                     |||.||||.||..||.||.|.|..|||||||..||.|   .||..|||||
BL01759___ycl      1 ATGATAGAAGTACGAGATATCATGAAACAATTCGGAGAGCAGACCGTTGT     50

BSNT_00676___     48 TCTTGAAGAGACGTCAGTCACGATTCAAAAGGGCAAAATCACCTCGTTTA     97
                     ||   |....|||.|..|.|||||.|||||.||.|..|||||.||.||.|
BL01759___ycl     51 TC---ATCCCACGACTTTAACGATACAAAAAGGAATGATCACGTCCTTCA     97

BSNT_00676___     98 TCGGTCCTAACGGCGCCGGCAAAAGTACGCTGCTGTCTATCATGAGCCGC    147
                     ||||.||.|||||.||.||.|||||.|||||..||||.|||||.|||.|.
BL01759___ycl     98 TCGGACCGAACGGAGCGGGAAAAAGCACGCTTTTGTCCATCATCAGCAGG    147

BSNT_00676___    148 CTGATCAAAAAGGATTCCGGCGA------GATTTACATAGACGGACAAGA    191
                     ||||||...|.|||..||||..|      ||||      |||||..||||
BL01759___ycl    148 CTGATCGGCATGGACGCCGGAAAAGTGCTGATT------GACGGCAAAGA    191

BSNT_00676___    192 GATTGGAGCATGTGACAGTAAAGAGCTTGCCAAGAAAATGAGCATTTTGA    241
                     .||.||.||.|...|.||.||.||..|.||.||.|||||.||||||||.|
BL01759___ycl    192 AATCGGCGCTTACAAAAGCAATGATTTAGCAAAAAAAATCAGCATTTTAA    241

BSNT_00676___    242 AGCAGGCGAACCAAATCAATATCAGGCTCACGATCAAAGACCTCGTCAGT    291
                     |||||.|.|||||.|||||.||||||||.||..|||..||.||||||||.
BL01759___ycl    242 AGCAGTCCAACCAGATCAACATCAGGCTGACTGTCAGGGAGCTCGTCAGC    291

BSNT_00676___    292 TTTGGCAGGTTTCCGTACTCACAGGGCCGGCT---GACAGAGGAAGACTG    338
                     ||.|||||||||||.||.||||||||..||||   ||.||||   |||||
BL01759___ycl    292 TTCGGCAGGTTTCCTTATTCACAGGGAAGGCTCTCGAAAGAG---GACTG    338

BSNT_00676___    339 GGTTCATA--TCAACCAGGCGCTCAGCTATATGAAGCTGGAAGACATTCA    386
                     ||  ||||  ||.|..|.|||.|....||.|||||||||..|||||||.|
BL01759___ycl    339 GG--CATATGTCGATGAAGCGATTGATTACATGAAGCTGAGAGACATTGA    386

BSNT_00676___    387 AGACAAATACTTGGATCAGCTGAGCGGCGGACAGTGCCAAAGGGCATTTA    436
                     ..|.|||.||.|.||||||.|.||||||||.||||||||..|.||.||.|
BL01759___ycl    387 GCATAAACACCTTGATCAGTTAAGCGGCGGCCAGTGCCAGCGCGCTTTCA    436

BSNT_00676___    437 TCGCCATGGTCATTGCCCAGGACACAGATTATATTTTTCTGGATGAGCCG    486
                     ||||.|||||||||||.|||||.||.||.|||||.||.||.||.||.||.
BL01759___ycl    437 TCGCGATGGTCATTGCTCAGGATACCGACTATATATTGCTTGACGAACCA    486

BSNT_00676___    487 CTGAACAATCTGGATATGAAACACTCAGTTGAAATTATGAAACTGCTGAA    536
                     .||||.|||||.|||||||||||||||||.||.||||||||.||..||||
BL01759___ycl    487 TTGAATAATCTCGATATGAAACACTCAGTAGAGATTATGAAGCTCTTGAA    536

BSNT_00676___    537 ACGGCTGGTAGAGGAGCTTGGAAAAACGATCGTCATCGTTATTCACGATA    586
                     |...||.||.||..|.|..||||||||||||||.||.||.|||||.||.|
BL01759___ycl    537 AGACCTTGTCGAAAATCGCGGAAAAACGATCGTTATTGTCATTCATGACA    586

BSNT_00676___    587 TCAATTTTGCTTCAGTCTATTCTGACCATATCGTCGCTTTGAAAAACGGC    636
                     |.|||||.||.||.||.|||||.|||...||||..||..||||||||||.
BL01759___ycl    587 TTAATTTCGCCTCGGTTTATTCCGACAGAATCGCAGCCCTGAAAAACGGG    636

BSNT_00676___    637 CGAATCGTAAAAGAAGGACCACCTGAAGAAATGATAGAAACATCAGTGCT    686
                     ||.||.||||||||.||.||..|.|||||.||.||..||||..|.|||||
BL01759___ycl    637 CGGATTGTAAAAGAGGGGCCGGCGGAAGACATTATCCAAACGCCGGTGCT    686

BSNT_00676___    687 TGAGGAAATCTACGATATGACCATCCCGATTCAGACGATT--GATAATCA    734
                     ..|.||.|||||.||||||..|||.|||||.|| ||.|.|  || .||||
BL01759___ycl    687 GAAAGACATCTATGATATGGACATTCCGATCCA-ACAAATCGGA-GATCA    734

BSNT_00676___    735 AAGAATAGGTGTCTATTTTTCTTAA----    759
                     ||.|||..||||.||||    ||||    
BL01759___ycl    735 AAAAATCTGTGTATATT----TTAAATGA    759


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00676 and BL01759

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
