Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00675 and BL01758
See
Amino acid alignment /
Visit
BSNT_00675 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence dna-align/BSNT_00675___yclO.1.5803.seq
# -bsequence dna-align/BL01758___yclO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00675___yclO-BL01758___yclO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00675___yclO-BL01758___yclO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00675___yclO
# 2: BL01758___yclO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity: 675/991 (68.1%)
# Similarity: 675/991 (68.1%)
# Gaps: 89/991 ( 9.0%)
# Score: 2131.0
#
#
#=======================================
BSNT_00675___ 1 ATGCG---TAACCAGATGAAAATAGCTT-TGCTCGTTGTTTTAGC--CAT 44
||||| |||.|| |||||| |||| |.|||.|.||..|||| ||
BL01758___ycl 1 ATGCGTCATAAACA---GAAAAT-GCTTGTACTCATCGTGATAGCAGCA- 45
BSNT_00675___ 45 TGTATGTATCGGCTTGTTTTTGTTTTATGACTTAGGCAAT-----TGGGA 89
||.||.|||||..|||||.||||.||.|..|| ||..| |||||
BL01758___ycl 46 -GTCTGCATCGGGCTGTTTCTGTTCTACGGTTT--GCCGTCTGTATGGGA 92
BSNT_00675___ 90 TTACACCCTGCCGAGACGAATCAAAAAAGTCGCTGCCA----TTGTGC-- 133
.||..|.||.|||.|..|..| ||||| ||.|||
BL01758___ycl 93 ATATGCGCTTCCGCGGAGGTT------------TGCCAAGGTTTTTGCGA 130
BSNT_00675___ 134 -------TGACGGGGGGAGCGATTGCGTTTTCGACCATGATCTTTCAAAC 176
||.| ||...|||||||||||.||||.|.|||||.||.|||||
BL01758___ycl 131 TCATCATTGTC-GGTACAGCGATTGCGTATTCGTCGATGATTTTCCAAAC 179
BSNT_00675___ 177 GATTACGAACAACCGCATCCTGACGCCGAGCATTTTGGGCCTTGATTCTC 226
|||.||.||||||.|.||..|||||||||||||..|.||.||.|||||||
BL01758___ycl 180 GATCACAAACAACAGAATTTTGACGCCGAGCATCCTCGGACTCGATTCTC 229
BSNT_00675___ 227 TCTACATGCTGATTCAGACTGGCATTATCTTTTTGTTCGGTTCTGCGAAT 276
||||..|.|||.|.||.||.||.|||||.||.||.||||||.|.||.||.
BL01758___ycl 230 TCTATGTTCTGCTGCAAACCGGGATTATTTTCTTTTTCGGTGCAGCCAAA 279
BSNT_00675___ 277 AT-GGTCATCATGAATAAAAACATCAACTTTATCATCTCT----GTTCTG 321
.| |.|.|.|.|| ..||||||..|||.|||.|..|.||| |||
BL01758___ycl 280 CTCGCTGACCTTG-GCAAAAACGGCAATTTTCTATTGTCTACCGGTT--- 325
BSNT_00675___ 322 CTGATGATCCTG-TTTTCTCTTGTTTTGTATCAGATCATGTTCAAGGGTG 370
|||||.| ||| |||||..||||..|||.|....|.||||||....|.|
BL01758___ycl 326 -TGATGGT-CTGCTTTTCATTTGTGCTGTTTTTCCTGATGTTCCGCCGCG 373
BSNT_00675___ 371 AGGGGAGAAATATCTTTTTCCTTCTGCTTATCGGAATCGTGTTTGGCACG 420
.|||.||..|.|||||..|.||.|||||..|.|||||||||||.|||||.
BL01758___ycl 374 GGGGAAGGCACATCTTCCTGCTGCTGCTCGTTGGAATCGTGTTCGGCACA 423
BSNT_00675___ 421 CTGTTCAGCAGCCTGTCTTCCTTTATGCAGATGCTGATTGATCCGAATGA 470
.|||||||.||||||||.||||||||||||||||||||.||||||||.||
BL01758___ycl 424 TTGTTCAGAAGCCTGTCATCCTTTATGCAGATGCTGATCGATCCGAACGA 473
BSNT_00675___ 471 GTTCCAAGTGGTGCAGGACAAGATGTTTGCCAGCTTTAACAACATCAATA 520
|||||||||.||.||..|||||||||||||||||||.|||||..|.||||
BL01758___ycl 474 GTTCCAAGTCGTTCAAAACAAGATGTTTGCCAGCTTCAACAATTTGAATA 523
BSNT_00675___ 521 CAGATTTGTTATGGCTCGCGTTC-ATCATCTTCCTGCTGACAGGCGTTTA 569
|.||..|.|||..|||.|| ||| .||.||.|.|||..||....||||||
BL01758___ycl 524 CGGACATTTTAGTGCTTGC-TTCGCTCGTCATTCTGGCGATTCTCGTTTA 572
BSNT_00675___ 570 TGTCTGGCGTTTTACAAAGTTTTTCGATGTGCTGTCGCTCGGACGCGAGC 619
.|..|||||.||||....||..||.||.|||.|.||||||||..|.||.|
BL01758___ycl 573 CGCTTGGCGGTTTAATCCGTACTTTGACGTGATTTCGCTCGGCAGGGATC 622
BSNT_00675___ 620 ACGCCGTGAATTTGGGCATTGACTACGACAAAGTGGTGAAGCAGATGCTG 669
|.|||||.||..|.||.||.||.||||||.....|||||||.|.||||||
BL01758___ycl 623 AAGCCGTCAACCTCGGAATCGATTACGACCGGACGGTGAAGAAAATGCTG 672
BSNT_00675___ 670 ATCGTGGTTGCGATTTTGGTTTCTGTTTCAACAGCGCTAGTCGGGCCGAT 719
|||||.||.||..||.|.|||||.||.||.||.||.||.||.||.|||||
BL01758___ycl 673 ATCGTCGTCGCCGTTCTCGTTTCCGTGTCTACTGCCCTCGTGGGTCCGAT 722
BSNT_00675___ 720 TATGTTTTTAGGCCTTCTGGTCGTCAACCTGGC----GAGAGAATTCCTG 765
.|..|||||.||.|||||.||||||||..|||| |||..|.||
BL01758___ycl 723 CACATTTTTGGGGCTTCTCGTCGTCAATGTGGCCCGGGAGGTATTT---- 768
BSNT_00675___ 766 AAAACATATAAGCATTCA---TACTTAATCGCAGGCTCCGTTTTCATCAG 812
|||||.|||||||| || |.||.|.|| |.||..|.|||||..||||
BL01758___ycl 769 AAAACGTATAAGCA--CAGCGTCCTGATTC-CCGGAGCGGTTTTGTTCAG 815
BSNT_00675___ 813 CATCATTGCGCTGGTCGGAGGGCAGTTTGTGGTTGAGAAAG-TGTTTACC 861
||||||||||||.||||||||.|||||..|.||||| |||| |||||...
BL01758___ycl 816 CATCATTGCGCTTGTCGGAGGCCAGTTCATTGTTGA-AAAGCTGTTTGGT 864
BSNT_00675___ 862 TTCTCAAC---GACGCT-GAGCGTCATTATTAATTTTGCCGGCGGGATTT 907
|| ||| |||||| |.| ||.||.|||.|||||..|||||||||||
BL01758___ycl 865 TT---AACGGTGACGCTCGTG-GTGATCATTGATTTTATCGGCGGGATTT 910
BSNT_00675___ 908 ATTTTATCTACTTGCTGTTAAAGGAGAATAAATCATGGTAG 948
|||||||.|||.||.||.|.||||||..|||||.|
BL01758___ycl 911 ATTTTATTTACCTGTTGCTGAAGGAGCGTAAATAA------ 945
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.