Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00674 and BL01757
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence dna-align/BSNT_00674___yclN.1.5803.seq
# -bsequence dna-align/BL01757___yclN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00674___yclN-BL01757___yclN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00674___yclN-BL01757___yclN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00674___yclN
# 2: BL01757___yclN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 979
# Identity: 694/979 (70.9%)
# Similarity: 694/979 (70.9%)
# Gaps: 53/979 ( 5.4%)
# Score: 2317.5
#
#
#=======================================
BSNT_00674___ 1 ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATC 50
|||||..||||.||||||||..|..|.||.|||||..|..||.|||..||
BL01757___ycl 1 ATGAAATTACGATACTTATTGCTAATGCTCATCATTCTTTCATTCAGCTC 50
BSNT_00674___ 51 TGTATTTATCGGTGTAGAAGATCTGTCGCCGCTTGATCTCTT-CGATTTA 99
..||||.|||||.||..|.||.||.|||||.|||||.||.|| ||.||||
BL01757___ycl 51 GATATTCATCGGCGTTAAGGAGCTTTCGCCTCTTGACCTTTTCCGCTTTA 100
BSNT_00674___ 100 AGCAAACAAGAGG-CG----TC-AACGTTGTTTGC--AAGCCGTTTGCCG 141
|.|||| || || |||| .|||.| ||||.|..|.|||
BL01757___ycl 101 -------ATGAGGACGAAATTCAAACG--CTTTACATAAGCAGAATCCCG 141
BSNT_00674___ 142 CGATTGATCAGCATTGTCATCGCGGGATTAAGCATGAGCATCTGCGGTTT 191
||.|||||||||||.||..|.||||||.|.|||.|||||||||||||..|
BL01757___ycl 142 CGCTTGATCAGCATCGTGCTTGCGGGAATGAGCTTGAGCATCTGCGGGCT 191
BSNT_00674___ 192 GATTATGCAGCAGATCA-GCAGAAACAAATTCGTGTCACCGACGACGGCG 240
|||.|||||||||.|.| || |.||.|||||.||.|||||.||.||.||.
BL01757___ycl 192 GATCATGCAGCAGCTGACGC-GCAATAAATTTGTTTCACCAACCACCGCT 240
BSNT_00674___ 241 GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTT 290
||.||||||||||||||..||||||||.|..|.|||.|..|..||||.||
BL01757___ycl 241 GGAACGATGGATTGGGCTCGGCTCGGCGTGATCATTGCGATCGTGCTTTT 290
BSNT_00674___ 291 TACATCCGC-----CAGTCCTTTAATCAAAATGCTGGTCGCGTTTGTCTT 335
|.|.||.|| .|| ||.|||||||.|||.|.||.|||||.||
BL01757___ycl 291 TTCGTCTGCAGGGATAG-----TAGTCAAAATACTGTTTGCCTTTGTTTT 335
BSNT_00674___ 336 TGCCC----TTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATC 381
|||.| |.|||| .|||.||||..|.|||||..|.||.||||||
BL01757___ycl 336 TGCACTGTTTGGCAG----CTTTTTGTTCGTCAAAATTTTGGACAGAATC 381
BSNT_00674___ 382 AAGTTTAACGACACCATCTTTATTCCGCTTGTCGGTTTAATGCTCGGGAA 431
|||||.||.||..|.||.||.||.||.||.|||||..|.||||||||||.
BL01757___ycl 382 AAGTTCAAAGATGCGATTTTCATCCCTCTCGTCGGAATGATGCTCGGGAG 431
BSNT_00674___ 432 TATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATCC 481
..|.|||||..|.|||.|.||.||.||.||.|||.|.||..|..|.||.|
BL01757___ycl 432 CGTTGTCAGCGCCATCTCTACTTTCATGGCTTATCAGTACAATATTATTC 481
BSNT_00674___ 482 AGAATGTGTCA--TCATGG-CTGCAGGGAGACTTCTCTTTAGTCGTGAAA 528
|.|| .|||| .||||| .||.||||| |.||.||..|.|||.||||.
BL01757___ycl 482 AAAA--CGTCAATGCATGGTTTGAAGGGA-ATTTTTCGCTCGTCATGAAG 528
BSNT_00674___ 529 GGAAGATACGAGCTTCTT-TATCTGAGTATTCCGCTCGTCATCATTGCCT 577
||.||.||.|||| |||| |.|||||||||.||||||||.||||||||||
BL01757___ycl 529 GGGAGGTATGAGC-TCTTATTTCTGAGTATACCGCTCGTTATCATTGCCT 577
BSNT_00674___ 578 ATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCT 627
||.|||..||..||||||||||.||||||||.|||||.||....|||||.
BL01757___ycl 578 ATCTGTTCGCCAATAAATTCACGTTGGCCGGGATGGGGGAGTCATTTTCC 627
BSNT_00674___ 628 GTCAACCTCGGCCTGAAGTACAAACGGGTTGTGAACATCGGGCTCATTAT 677
.||||.||.||..||||.|||||.|||||.||.||.||||||||.||.||
BL01757___ycl 628 ATCAATCTTGGTTTGAAATACAAGCGGGTGGTCAATATCGGGCTGATCAT 677
BSNT_00674___ 678 CGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATGCTGCCGT 727
|||.||..|.||..|||||.|.|||||..||||..||||.|.|||.||.|
BL01757___ycl 678 CGTATCTATTATTTCGTCCGTCGTCATCCTGACGATCGGCACGCTTCCCT 727
BSNT_00674___ 728 TTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAAT 777
||.|.||.||.|||||||||||.||.||.||.||||||||.|||||..||
BL01757___ycl 728 TTTTGGGATTGATCATCCCGAACATCGTGTCCATTTACAGGGGAGATCAT 777
BSNT_00674___ 778 CTGAAGAGCAGCCTGCCGCATACTGCGCTGTTGGGAGCGGTGTTTGTGCT 827
.||||.|.|||||||||.||.||.|||.|..|.|||||.||.||.||..|
BL01757___ycl 778 TTGAAAAACAGCCTGCCTCACACGGCGGTTCTCGGAGCCGTTTTCGTCTT 827
BSNT_00674___ 828 GTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGA 877
|||||||||||||..|||..|..||.|.||.|.|||.||.|||||.|||.
BL01757___ycl 828 GTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGG 877
BSNT_00674___ 878 TTGGCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTA--TGC 925
||||..||||||||||.||||||||.||||||.|||| |.|||| |||
BL01757___ycl 878 TTGGTTTGATGGTCGGCATCATCGGGAGCGGCGTTTT--TCTTTACTTGC 925
BSNT_00674___ 926 TGTTAAGGAGAAAAGCCTATGCGTAA--- 951
|.||||||||||||||||||||||.|
BL01757___ycl 926 TTTTAAGGAGAAAAGCCTATGCGTCATAA 954
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