Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00674 and BL01757

See Amino acid alignment / Visit BSNT_00674 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence dna-align/BSNT_00674___yclN.1.5803.seq
#    -bsequence dna-align/BL01757___yclN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00674___yclN-BL01757___yclN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00674___yclN-BL01757___yclN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00674___yclN
# 2: BL01757___yclN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 979
# Identity:     694/979 (70.9%)
# Similarity:   694/979 (70.9%)
# Gaps:          53/979 ( 5.4%)
# Score: 2317.5
# 
#
#=======================================

BSNT_00674___      1 ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATC     50
                     |||||..||||.||||||||..|..|.||.|||||..|..||.|||..||
BL01757___ycl      1 ATGAAATTACGATACTTATTGCTAATGCTCATCATTCTTTCATTCAGCTC     50

BSNT_00674___     51 TGTATTTATCGGTGTAGAAGATCTGTCGCCGCTTGATCTCTT-CGATTTA     99
                     ..||||.|||||.||..|.||.||.|||||.|||||.||.|| ||.||||
BL01757___ycl     51 GATATTCATCGGCGTTAAGGAGCTTTCGCCTCTTGACCTTTTCCGCTTTA    100

BSNT_00674___    100 AGCAAACAAGAGG-CG----TC-AACGTTGTTTGC--AAGCCGTTTGCCG    141
                            |.|||| ||    || ||||  .|||.|  ||||.|..|.|||
BL01757___ycl    101 -------ATGAGGACGAAATTCAAACG--CTTTACATAAGCAGAATCCCG    141

BSNT_00674___    142 CGATTGATCAGCATTGTCATCGCGGGATTAAGCATGAGCATCTGCGGTTT    191
                     ||.|||||||||||.||..|.||||||.|.|||.|||||||||||||..|
BL01757___ycl    142 CGCTTGATCAGCATCGTGCTTGCGGGAATGAGCTTGAGCATCTGCGGGCT    191

BSNT_00674___    192 GATTATGCAGCAGATCA-GCAGAAACAAATTCGTGTCACCGACGACGGCG    240
                     |||.|||||||||.|.| || |.||.|||||.||.|||||.||.||.||.
BL01757___ycl    192 GATCATGCAGCAGCTGACGC-GCAATAAATTTGTTTCACCAACCACCGCT    240

BSNT_00674___    241 GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTT    290
                     ||.||||||||||||||..||||||||.|..|.|||.|..|..||||.||
BL01757___ycl    241 GGAACGATGGATTGGGCTCGGCTCGGCGTGATCATTGCGATCGTGCTTTT    290

BSNT_00674___    291 TACATCCGC-----CAGTCCTTTAATCAAAATGCTGGTCGCGTTTGTCTT    335
                     |.|.||.||     .||     ||.|||||||.|||.|.||.|||||.||
BL01757___ycl    291 TTCGTCTGCAGGGATAG-----TAGTCAAAATACTGTTTGCCTTTGTTTT    335

BSNT_00674___    336 TGCCC----TTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATC    381
                     |||.|    |.||||    .|||.||||..|.|||||..|.||.||||||
BL01757___ycl    336 TGCACTGTTTGGCAG----CTTTTTGTTCGTCAAAATTTTGGACAGAATC    381

BSNT_00674___    382 AAGTTTAACGACACCATCTTTATTCCGCTTGTCGGTTTAATGCTCGGGAA    431
                     |||||.||.||..|.||.||.||.||.||.|||||..|.||||||||||.
BL01757___ycl    382 AAGTTCAAAGATGCGATTTTCATCCCTCTCGTCGGAATGATGCTCGGGAG    431

BSNT_00674___    432 TATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATCC    481
                     ..|.|||||..|.|||.|.||.||.||.||.|||.|.||..|..|.||.|
BL01757___ycl    432 CGTTGTCAGCGCCATCTCTACTTTCATGGCTTATCAGTACAATATTATTC    481

BSNT_00674___    482 AGAATGTGTCA--TCATGG-CTGCAGGGAGACTTCTCTTTAGTCGTGAAA    528
                     |.||  .||||  .||||| .||.||||| |.||.||..|.|||.||||.
BL01757___ycl    482 AAAA--CGTCAATGCATGGTTTGAAGGGA-ATTTTTCGCTCGTCATGAAG    528

BSNT_00674___    529 GGAAGATACGAGCTTCTT-TATCTGAGTATTCCGCTCGTCATCATTGCCT    577
                     ||.||.||.|||| |||| |.|||||||||.||||||||.||||||||||
BL01757___ycl    529 GGGAGGTATGAGC-TCTTATTTCTGAGTATACCGCTCGTTATCATTGCCT    577

BSNT_00674___    578 ATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCT    627
                     ||.|||..||..||||||||||.||||||||.|||||.||....|||||.
BL01757___ycl    578 ATCTGTTCGCCAATAAATTCACGTTGGCCGGGATGGGGGAGTCATTTTCC    627

BSNT_00674___    628 GTCAACCTCGGCCTGAAGTACAAACGGGTTGTGAACATCGGGCTCATTAT    677
                     .||||.||.||..||||.|||||.|||||.||.||.||||||||.||.||
BL01757___ycl    628 ATCAATCTTGGTTTGAAATACAAGCGGGTGGTCAATATCGGGCTGATCAT    677

BSNT_00674___    678 CGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATGCTGCCGT    727
                     |||.||..|.||..|||||.|.|||||..||||..||||.|.|||.||.|
BL01757___ycl    678 CGTATCTATTATTTCGTCCGTCGTCATCCTGACGATCGGCACGCTTCCCT    727

BSNT_00674___    728 TTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAAT    777
                     ||.|.||.||.|||||||||||.||.||.||.||||||||.|||||..||
BL01757___ycl    728 TTTTGGGATTGATCATCCCGAACATCGTGTCCATTTACAGGGGAGATCAT    777

BSNT_00674___    778 CTGAAGAGCAGCCTGCCGCATACTGCGCTGTTGGGAGCGGTGTTTGTGCT    827
                     .||||.|.|||||||||.||.||.|||.|..|.|||||.||.||.||..|
BL01757___ycl    778 TTGAAAAACAGCCTGCCTCACACGGCGGTTCTCGGAGCCGTTTTCGTCTT    827

BSNT_00674___    828 GTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGA    877
                     |||||||||||||..|||..|..||.|.||.|.|||.||.|||||.|||.
BL01757___ycl    828 GTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGG    877

BSNT_00674___    878 TTGGCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTA--TGC    925
                     ||||..||||||||||.||||||||.||||||.||||  |.||||  |||
BL01757___ycl    878 TTGGTTTGATGGTCGGCATCATCGGGAGCGGCGTTTT--TCTTTACTTGC    925

BSNT_00674___    926 TGTTAAGGAGAAAAGCCTATGCGTAA---    951
                     |.||||||||||||||||||||||.|   
BL01757___ycl    926 TTTTAAGGAGAAAAGCCTATGCGTCATAA    954


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