Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00667 and BL01756
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence dna-align/BSNT_00667___yclK.1.5803.seq
# -bsequence dna-align/BL01756___yclK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00667___yclK-BL01756___yclK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00667___yclK-BL01756___yclK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00667___yclK
# 2: BL01756___yclK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1488
# Identity: 1022/1488 (68.7%)
# Similarity: 1022/1488 (68.7%)
# Gaps: 129/1488 ( 8.7%)
# Score: 3279.5
#
#
#=======================================
BSNT_00667___ 1 ATGAAGATTAAATATTTATATCAGCTGCTGCTTAGCCATATCAGCATTTT 50
|||||||||||.|||.|.||||||||||||...||.||.|||||.||.||
BL01756___ycl 1 ATGAAGATTAAGTATCTCTATCAGCTGCTGGCCAGTCACATCAGTATATT 50
BSNT_00667___ 51 GATTTTAGCGTTTGTCATTATCATTTCTCTGTTTTCCCACTTTGTGAAAG 100
..|.||.||.|||.||||.|......|.||||||||.|||||||..||||
BL01756___ycl 51 AGTCTTGGCTTTTCTCATCACGGGGGCGCTGTTTTCACACTTTGCCAAAG 100
BSNT_00667___ 101 AATTTGCCTATCAAAACAAAGTAGAGGAATTGACGTCATATGCGG-TGCA 149
|.|||||.||..|.|.||||||.||.||..||.|.||.|| ||| |.|.
BL01756___ycl 101 ACTTTGCATACGAGAGCAAAGTCGATGAGCTGTCTTCCTA--CGGCTACC 148
BSNT_00667___ 150 G-ATC----GC-AAATGAATTCCAAGCCGGCCAGGTGGACATGCGCAGG- 192
| ||| || |||||.| .|..|||||....||| ||||.||
BL01756___ycl 149 GCATCATGGGCGAAATGGA----GATGCGGCCGAAAGGA---GCGCCGGC 191
BSNT_00667___ 193 CTTTAT----CCTTATCAGGACATGTT---AAGCACAAGAAAGACGCAG- 234
|.|||| ||.|.|.||||.||.|| |||| ||.|||| .|||
BL01756___ycl 192 CATTATGAAGCCGTTTGAGGAAATTTTGCGAAGC---AGGAAGA-TCAGC 237
BSNT_00667___ 235 -TTTATCATCTTTAATGAAGAGCAGCAGCCTTATTTTCTTCCTGAAG--- 280
|||.|| |.|||||||||.||.|..|| .||||..|||.|
BL01756___ycl 238 TTTTTTC-TGTTTAATGAAAAGAAAGAG-------ATCTTGATGACGCCG 279
BSNT_00667___ 281 ---GCTTTCATCACCCACCAAGGGAACAGC-------TGAAGAAATCAGA 320
|.||| .|..||.|.|| |||.|| |||.|| |||
BL01756___ycl 280 GCCGATTT--GCGGCCGCGAA---AACTGCTGCTCAGTGATGA----AGA 320
BSNT_00667___ 321 ATGGAATAAGCTAAAAAAAGGGCAGACTGTCATGATCAGGGCAGA---TG 367
||||||..||||.|||.|.||..||.|.||..|..|||...|.|| |.
BL01756___ycl 321 ATGGAAAGAGCTTAAAGATGGAAAGGCCGTTGTCGTCAAAACCGACTTTA 370
BSNT_00667___ 368 GCCGTTTTGATGATGAAGTGTCACTTGTGGCGCAGCCTATATTTGTTCAG 417
.|||||||.||||.|||||.||..|.||.||.|.|||.|...|.||..|.
BL01756___ycl 371 ACCGTTTTAATGAGGAAGTATCGGTCGTCGCTCTGCCCAACATCGTCAAC 420
BSNT_00667___ 418 AACGAATTTAAAGGCGCCGTTCTGCTGATTTCTCCGATCAGCGGTGTTGA 467
||.||||||.|.||.|.|.|||||||||...|||||||||||||....||
BL01756___ycl 421 AATGAATTTCAGGGAGGCATTCTGCTGACCGCTCCGATCAGCGGGACCGA 470
BSNT_00667___ 468 ACAGATGGTCAATCAG----GTCAACCTCTATATG--TTTTAC------- 504
|.|.||| ||||| .|.||||.||.|||| .|||||
BL01756___ycl 471 AGAAATG----ATCAGCGACATGAACCGCTTTATGCTCTTTACGGCGGCG 516
BSNT_00667___ 505 GCTGTGATC--AGCACGCTTGTGATTACGATTCTCGTGAGCTGGCTTCTG 552
|.|||.||| || .|||| ||||||.|.||||||||...|
BL01756___ycl 517 GGTGTCATCTTAG-TCGCT----------ATTCTCTTAAGCTGGCTGACG 555
BSNT_00667___ 553 TCCAAATTCCATGTCAAGCGGATTCAAAAGCTGAGAGAAGCGACAGATAA 602
||.||||||||||||...||.|||||.|||||..|.||.||.||..|.||
BL01756___ycl 556 TCGAAATTCCATGTCGCCCGCATTCAGAAGCTCCGCGACGCCACGAAAAA 605
BSNT_00667___ 603 AGTGGCTTCCGGCGATTATGACATCCATTTGGAAAACAGC--TACGGAGA 650
|||.||..||||.|||||||||||||||.|.||||||.|| ||.| ||
BL01756___ycl 606 AGTCGCGGCCGGGGATTATGACATCCATATCGAAAACCGCAATAAG--GA 653
BSNT_00667___ 651 CGAAATCGGCG-TTCTGGCGTCTGACTTTAATATCATGGCGAAAAAACT- 698
.||||||||.| ||..||||.| ||||||||.||.|||||....||.||
BL01756___ycl 654 TGAAATCGGTGATTTGGGCGAC-GACTTTAACATTATGGCCCGCAAGCTA 702
BSNT_00667___ 699 -AAAGCAGTCAAGGGATGAAATCGAGCGCCTTGAGAAGCGGAGAAGGCAG 747
||||| |||||.||.||||||||.||.||.||.|||||||||||||||
BL01756___ycl 703 AAAAGC--TCAAGCGAGGAAATCGACCGGCTCGAAAAGCGGAGAAGGCAG 750
BSNT_00667___ 748 TTTATTGCTGATGTGTCACATGAATTAAAAACACCGCTGACGACGATCAA 797
|||||..||||.||.||||||||..|.||.||.||||||||||||||||.
BL01756___ycl 751 TTTATCACTGACGTTTCACATGAGCTGAAGACGCCGCTGACGACGATCAG 800
BSNT_00667___ 798 CGGTTTGGTTGAAGGGTTGAACAGCCATACGATTCCTGAGGATAAAAAGG 847
||||||.||.||||||.||||||||||.|||||.||.||.||..|..|||
BL01756___ycl 801 CGGTTTAGTGGAAGGGATGAACAGCCAGACGATACCCGAAGACCAGCAGG 850
BSNT_00667___ 848 ATAAATGCTTCTCGCTGATCAGTGAGGAAACGAAGCGCATGCTGCGGCTC 897
|||||||..|...||||||||..|||||.||.||..|..||.|.||.|||
BL01756___ycl 851 ATAAATGTATGAAGCTGATCACGGAGGAGACAAAAAGGCTGATTCGCCTC 900
BSNT_00667___ 898 GTAAAAGAAAATCTGGATTATGAAAAAATCAGATCCCAGCAAATTACCTT 947
||.||.|||||.||.|||||||||||||||.|.|||.|.||.|||||.||
BL01756___ycl 901 GTCAACGAAAACCTTGATTATGAAAAAATCCGCTCCAACCAGATTACATT 950
BSNT_00667___ 948 GAACAAGCTAGACGTTCCTCTGATCGAGGTGTTTGAAATCGTGAAAGAGC 997
|.|.|||||..|...|||.||||||||.||||||||||||.|.|||||||
BL01756___ycl 951 GCAAAAGCTGCATTATCCGCTGATCGAAGTGTTTGAAATCATTAAAGAGC 1000
BSNT_00667___ 998 A-CTTGCAGCAGCAGGCGGAAGAAAAACAAAACAAGCTGAT----GATAC 1042
| ||.|| ||..||||||||.||.|.|||.||..||||||| |||
BL01756___ycl 1001 AGCTGGC-GCTTCAGGCGGAGGAGAGACAGAATCAGCTGATCCTCGAT-- 1047
BSNT_00667___ 1043 AAGTAGAGGATCACGTCATCGTACATGCCGATTATGACCGGTTCATTCAA 1092
||.||.|||||.||.||.||..||||||||||.||||||.||||.||.
BL01756___ycl 1048 --GTGGAAGATCATGTAATGGTCAATGCCGATTACGACCGGCTCATCCAG 1095
BSNT_00667___ 1093 ATTCTCGTCAACATTACGAAAAACAGCATCCAATTTACGCAA--AACGGT 1140
|||||||||||.||||||||.||||||||.||||| |.||| |||||.
BL01756___ycl 1096 ATTCTCGTCAATATTACGAAGAACAGCATTCAATT--CACAACGAACGGA 1143
BSNT_00667___ 1141 GACATTTGGCTGCGCGGAATGGAAGGTTATAAAGAGACGATTATTGAAAT 1190
..|.||||||||.|.||...|||||..||.||.||||||.|.||.|||.|
BL01756___ycl 1144 ACCGTTTGGCTGAGAGGCCGGGAAGACTACAAGGAGACGGTGATCGAAGT 1193
BSNT_00667___ 1191 TGAAGACACGGGTATCGGCATTCCAAAAGAGGATATTGAGCATATTTGGG 1240
.||.||.||.||.|||||||||....||.|.|||||.||..|.|||||||
BL01756___ycl 1194 AGAGGATACCGGAATCGGCATTGATGAAAATGATATCGAAAACATTTGGG 1243
BSNT_00667___ 1241 AGCGATTCTATAAAGCAGATATTTCAAGAACGAACACAGCATACGGTGAA 1290
|.||.||.||||||||.|||.|.|||.|.||.||||||.|.|||||.|||
BL01756___ycl 1244 ATCGTTTTTATAAAGCGGATTTATCACGGACAAACACACCTTACGGAGAA 1293
BSNT_00667___ 1291 TACGGACTCGGTCTCTCGATCGTCAGGCAGCTCGTTGAAATGCACCAGGG 1340
|||||.||.||.||.|||||||||||.||||||||.....|.|||.|.||
BL01756___ycl 1294 TACGGGCTGGGGCTGTCGATCGTCAGACAGCTCGTCTCCCTTCACAACGG 1343
BSNT_00667___ 1341 CACAGTAGAAAT--CAAGAGTGAAGAAGGGAAAGGCACAAAGTTCATCAT 1388
|||.|||||.|| .|||.|.|||.|| .|||||.|||||.||.|||||
BL01756___ycl 1344 CACGGTAGAGATTGAAAGCGAGAAAAA--CAAAGGAACAAAATTTATCAT 1391
BSNT_00667___ 1389 CCGCCTTCCTTTAACGGCAAAACA-------GCAATAG 1419
||||||.||..|.|||||.|.|.| | |||||
BL01756___ycl 1392 CCGCCTGCCGCTGACGGCGAGAGATGATGATG-AATAG 1428
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