Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00666 and BL01755
See
Amino acid alignment /
Visit
BSNT_00666 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence dna-align/BSNT_00666.1.5803.seq
# -bsequence dna-align/BL01755___yclJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00666-BL01755___yclJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00666-BL01755___yclJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00666
# 2: BL01755___yclJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 895
# Identity: 523/895 (58.4%)
# Similarity: 523/895 (58.4%)
# Gaps: 233/895 (26.0%)
# Score: 1902.5
#
#
#=======================================
BSNT_00666 1 ATGGATAAGACCGCCTCTGGGGCGCGTCCCCTTGCTGATAAATTAATTGT 50
BL01755___ycl 0 -------------------------------------------------- 0
BSNT_00666 51 AGTCCAAAGGTATGAAAAAAATATGAATAATCTATTTCTAGTTGATGAAA 100
BL01755___ycl 0 -------------------------------------------------- 0
BSNT_00666 101 TAAAAACTAACAATTGTGAAACGCAAAACCTTCTGTTTAAAATGGTGCTA 150
BL01755___ycl 0 -------------------------------------------------- 0
BSNT_00666 151 TTATATAAAAAAGCATCAAAACAACCGGAGGATATAATGAAAATATTAAT 200
||||||||||||||
BL01755___ycl 1 ------------------------------------ATGAAAATATTAAT 14
BSNT_00666 201 GATAGAAGATAATGTTAGTGTATGTACGATGACGGAGATGTTCTTTTTTA 250
|||.|||||||||.|.||.||||||||.|||||.||||||||.|||...|
BL01755___ycl 15 GATTGAAGATAATTTAAGCGTATGTACTATGACAGAGATGTTTTTTGCAA 64
BSNT_00666 251 AAGAAGGTTTTGAAGCGGAATTCGTTCATGACGGGTTAGAAGGGTACCAG 300
|||||||.||||||.|.||.|||||.||||||||..|.|||||.||..|.
BL01755___ycl 65 AAGAAGGATTTGAAACAGAGTTCGTCCATGACGGACTCGAAGGATATAAC 114
BSNT_00666 301 CGTTTTACGGAAGAAA-------ATTGGGAT---CTGATCATTTTGGATA 340
|||||| ||| |||||||| ||||||| |.||||
BL01755___ycl 115 CGTTTT-------AAATCAGGTGATTGGGATTTGCTGATCA---TCGATA 154
BSNT_00666 341 TCATGCTTCCATCTATGGACGGCGTGACCATCTGCAGAAAAATAAGAG-A 389
|||||||.||.||.|||||.||.||.||.|||||||.|||..|.|||| |
BL01755___ycl 155 TCATGCTGCCGTCGATGGATGGGGTCACGATCTGCAAAAAGGTCAGAGAA 204
BSNT_00666 390 GACAAGCACGGTGCCGATTATCATGCTGACTGCCAAAGACACTGAATCAG 439
|| .||||||||.||||||||.||||||||.||.||.||.||.|||||||
BL01755___ycl 205 GA-GAGCACGGTTCCGATTATTATGCTGACGGCAAAGGATACGGAATCAG 253
BSNT_00666 440 ATCAGGTCATCGGCTTTGAGATGGGGGCGGACGATTATGTCACAAAGCCG 489
|.|||||..||||.||||||.|.|||||.||.||||||||.||.||||||
BL01755___ycl 254 ACCAGGTGCTCGGTTTTGAGCTCGGGGCTGATGATTATGTGACCAAGCCG 303
BSNT_00666 490 TTCAGTCCGCTGACATTGGTTGCCCGCATCAAAGCCGTCATCAGAAGATA 539
|||||.||..||.|..|.||.||..|.||||||||.||.|.|.|.|||||
BL01755___ycl 304 TTCAGCCCTTTGGCGCTTGTGGCGAGAATCAAAGCGGTGAGCCGGAGATA 353
BSNT_00666 540 -CAA---GGCGACAGGCAAAGCGGTTATT--GATGA---AGATATGATCG 580
||| |.||.|.|||| || ||| |.||| .||.|.|.|.|
BL01755___ycl 354 TCAAAACGCCGGCCGGCA----GG--ATTCCGCTGACAGCGACACGCTTG 397
BSNT_00666 581 AAACGGAATGCTTTACCATCAATAAGAAGACGAGAGAAGTATTATTAAAC 630
||||||||...||||..||||||||.||.|||||||||||.||.||..||
BL01755___ycl 398 AAACGGAACATTTTAAAATCAATAAAAAAACGAGAGAAGTGTTTTTGGAC 447
BSNT_00666 631 GGAGAGCCTGTAGAAAATCTCACGCCGAAGGAATTCGATCTGCTTTATTA 680
||.|..|...|..|||||.|.|||||.|||||.||||||.|..|.|||||
BL01755___ycl 448 GGCGTTCAAATTCAAAATTTGACGCCTAAGGAGTTCGATTTATTGTATTA 497
BSNT_00666 681 CCTTGTCCAAAATCCGCGGCAGGTGTTCTCCAGAGAACAGCTGCTTGAGC 730
|.|.||.||||..|||...|||||.||.||.||.||.|||||||||||||
BL01755___ycl 498 CTTGGTGCAAAGCCCGAAACAGGTTTTTTCAAGGGAGCAGCTGCTTGAGC 547
BSNT_00666 731 AGGTATGGGGCTATCAATTTTACGGAGATGAGCGAACGGTTGACGTTCAT 780
||||.|||||.||.|||||.||||||||.|||||.||.||.||.||||||
BL01755___ycl 548 AGGTTTGGGGATACCAATTCTACGGAGACGAGCGGACTGTGGATGTTCAT 597
BSNT_00666 781 ATCAAACGGCTGCGGAAAAAGCTTGCCAGCGA-----GGACAAGCCTTTC 825
||.|||||||||.|.||||||||||.|||||| | |||.||.
BL01755___ycl 598 ATTAAACGGCTGAGAAAAAAGCTTGGCAGCGACTCGCG-----GCCGTTT 642
BSNT_00666 826 CTGTATACTGTGTGGGGAGTAGGGTATAAATTTGATGAAGATTAA 870
||.||.||.||.||||||||||||||.||.||.||||||||||||
BL01755___ycl 643 CTTTACACCGTATGGGGAGTAGGGTACAAGTTCGATGAAGATTAA 687
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.