Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06239 and BL01754
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence dna-align/BSNT_06239.1.5803.seq
# -bsequence dna-align/BL01754___mtaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06239-BL01754___mtaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06239-BL01754___mtaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06239
# 2: BL01754___mtaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 835
# Identity: 461/835 (55.2%)
# Similarity: 461/835 (55.2%)
# Gaps: 206/835 (24.7%)
# Score: 1064.5
#
#
#=======================================
BSNT_06239 1 ATGGTGAAATTA-ACAGTAAAAGAA--------CTATCCAATATTGCGAA 41
|||.| .|| ||.||||||||| || |.|||||
BL01754___mta 1 ATGCT----CTATACGGTAAAAGAAGTGGCTCGCT--------TGGCGAA 38
BSNT_06239 42 TGTCACAATCAAAACGCTTTATCATTACCACAAAATCGG-CT----TGCT 86
|.||||.|||||||||||.||.||.||.||.|||||||| || |||.
BL01754___mta 39 TATCACGATCAAAACGCTGTACCACTATCATAAAATCGGACTTTTATGCC 88
BSNT_06239 87 CC-CAAAGGAAATAAGCGAAGCCGGATATC----------GGTACTATGG 125
|| | |||..|.|..||.|||||.|||| |||| |..|
BL01754___mta 89 CCGC---GGAGGTGACGGATGCCGGCTATCGCCTTTACGGGGTA--AAAG 133
BSNT_06239 126 TGCTGACGAACTAAAAAGACTGCAGGAAATCCTTTTTTACAAAGAATTAG 175
.|||| |||| |.||||||.|.|||.|.|||||....||..|.|
BL01754___mta 134 AGCTG--GAAC------GGCTGCAGCACATCTTGTTTTATCGGGAGCTCG 175
BSNT_06239 176 ATATTCCTTTG-TCA--GAAATCA-----------------AAAGATTAT 205
|..|||| | ||| |.|||.| ||||.|.||
BL01754___mta 176 AATTTCC---GCTCAAGGCAATTAAGCAAATACTGGACGGCAAAGCTGAT 222
BSNT_06239 206 TAAATGAGGAT----GCTGA-AAGAACAAGTACATTAGAAAAACAAAAAA 250
..|.|||.||| .|||| .|||| |.||...|| ||
BL01754___mta 223 CGACTGACGATTTTGTCTGAGCAGAA-ACGTCTTTT-------CA----- 259
BSNT_06239 251 AGCT----GTTTGAAAAGAAAATTGAAAAGTATCAGCGTCTCATTCAAAC 296
|| |||||.|.|| ||||.||.|| ||.|||...||
BL01754___mta 260 --CTGCCCGTTTGGACAG--AATTAAACAG---------CTTATTTCTAC 296
BSNT_06239 297 AGTCAACACATCTTTAGAATACA------CGAGAAAAGGTGAAAACATGG 340
..|| .||||.|.| ||.|| || |.|||||.|||...||||
BL01754___mta 297 GATC----GATCTCTCG-ATTCAGCAGGCCG-GGAAAGGAGAAGCAATGG 340
BSNT_06239 341 ATCA--TAAGGTAATGTTTAAAGGATTTGAAAGC-GCTGAAGAATGGAAA 387
|||| .||| .|||||.|||||.|||..|||| ||.| .||||||.|.
BL01754___mta 341 ATCAATCAAG--CATGTTCAAAGGGTTTTCAAGCAGCAG-GGAATGGGAG 387
BSNT_06239 388 CAATCTTTAGCAGAACAAAATGGGTATTTAAAAGA-GCGTTA------CG 430
.|..|..|.||.||||||||..|.|||||.||.|| ||| || ||
BL01754___mta 388 GATGCGCTCGCTGAACAAAACCGCTATTTGAAGGAGGCG-TATGATGTCG 436
BSNT_06239 431 ATTT--TGAATTGGATACACATACAATCAATGTCGATGAAATGAACAAAA 478
|||| |||| .|||.| || ||.|||..|..||.||||||||..|||
BL01754___mta 437 ATTTGCTGAA-AGGAGA-AC---CAGTCATAGCGGAAGAAATGAATGAAA 481
BSNT_06239 479 TGGCAATAGAGGCTAAACATTTTCTTGATAGGATGGCTGATTTTTTAAGA 528
..||...||||||....|.||||.|..||.|.|||||.||.....|.|||
BL01754___mta 482 AAGCTGAAGAGGCGGCCCGTTTTATGAATGGAATGGCCGAAGCGCTCAGA 531
BSNT_06239 529 AATGGTGTAACGTATCATGACCCTTCCGTGCAAGAGCATGTCATGAAT-- 576
.|.||.||.| |.||.||| ||.||.||.||.|.||.|
BL01754___mta 532 GACGGAGTCA---AACACGAC---------CATGAACAAGTGAAGACTGC 569
BSNT_06239 577 ----------CATCTTAAGTTCCTAAATCAGAACGGGCAT-----CCGAC 611
||.||.|||||..| |||.|| |||||
BL01754___mta 570 AATTAAACGGCACCTCAAGTTTTT----------GGGAATTACGCCCGAC 609
BSNT_06239 612 AAGTAAAGA-----AGACTACGTAAAACAAACACGTTTTTTTATGCAAGA 656
|| ||.| .||.|||||.||.|||||..||||
BL01754___mta 610 -------GATTTTCAGTC--------CCAGACACGCTTCTTTATCGAAGA 644
BSNT_06239 657 TGATTTCCATAGAGGAATGTTAGAAGAGCAGCAAGCCGGTTTATCTTATT 706
.|||||.|||.|.||||||.|.|||.|.||||||.|.||..|.||.||||
BL01754___mta 645 CGATTTTCATCGCGGAATGCTTGAAAATCAGCAAACAGGCCTCTCGTATT 694
BSNT_06239 707 ATTTGGTTGTCGTTGCAGAA-CACCTG-----TAG 735
||||||.||..|.||||||| ||..|| ||.
BL01754___mta 695 ATTTGGCTGCTGCTGCAGAAGCATTTGCTTCATAA 729
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