Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00662 and BL01753
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence dna-align/BSNT_00662___gerKB.1.5803.seq
# -bsequence dna-align/BL01753___gerKB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00662___gerKB-BL01753___gerKB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00662___gerKB-BL01753___gerKB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00662___gerKB
# 2: BL01753___gerKB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1228
# Identity: 723/1228 (58.9%)
# Similarity: 723/1228 (58.9%)
# Gaps: 227/1228 (18.5%)
# Score: 1795.0
#
#
#=======================================
BSNT_00662___ 1 ATGGAAAAAGCCAGAATAA-----GCATAAGGCAGCTGTTTGTCATGATT 45
|||||.|||||.|.|||.| ||| ||||||||.||..|.|||
BL01753___ger 1 ATGGAGAAAGCAAAAATCAGTGCTGCA-----CAGCTGTTCGTGCTTATT 45
BSNT_00662___ 46 ATCATTTTTGAACTGGGCAGCTCCTTATTGATTACACCGGGATCAA--TG 93
.|..|.||||||||..|||||||..|..|||||...||.||| ||| ||
BL01753___ger 46 GTTCTGTTTGAACTCAGCAGCTCTCTGCTGATTTTTCCAGGA-CAATCTG 94
BSNT_00662___ 94 GCGGGCAGGGATGCTTGGATAGCAGTTTTATTAGG--CTGTGCGATCGGA 141
.||..|| |||.||.|||||.||..|.||.||.|| |.||..|| ||.
BL01753___ger 95 CCGAACA-GGACGCCTGGATCGCGATCTTGTTCGGAACAGTCGGA--GGG 141
BSNT_00662___ 142 CTG--TTTCTTTTCTGTTTGTATCAAGGCATTTATCAA-----TGTTATC 184
||| ||| .|||.|| .||.|||| .|||.||.| || .|||
BL01753___ger 142 CTGGCTTT-GTTTATG-ATGCATCA----CTTTTTCTACCAGGTG-AATC 184
BSNT_00662___ 185 CGAATTCTTCTCCGAAAGAATATATG--GATG-ATATGCTGGGAACCAAG 231
|..|..|.|||||..|.||| |.| |||| ||||..|.|||| ||.
BL01753___ger 185 CCGACGCCTCTCCCTATGAA---ACGCTGATGAATATTTTTGGAA--AAC 229
BSNT_00662___ 232 CTGAGCTGGCTG----TTTTCATTTCTCTATA--------TATTGTACTT 269
| .|.|||||| .|..|||||.||||.| ||||||
BL01753___ger 230 C--GGTTGGCTGGAGCATGACATTTATCTACATTGTTTATTATTGT---- 273
BSNT_00662___ 270 TGCCTATAATGCCGCAAGGGTGCTGCGTGACTTTGGAGAAATGCTGCTGA 319
||.|.|||.||||||||..||||.||.|||||||||||||||||||
BL01753___ger 274 ----TACATTGCGGCAAGGGTTTTGCGCGATTTTGGAGAAATGCTGCTGA 319
BSNT_00662___ 320 CGTTTGCTTATCATGATACACCTATCATTATTGTAAATGCTTTATTAATG 369
|.|..|||||||...|.||.||.||.||..|.|..||||..||.||.||.
BL01753___ger 320 CATCGGCTTATCCGAACACGCCGATTATCTTCGCTAATGGATTGTTGATT 369
BSNT_00662___ 370 GTAGTAAGCATATATGCCGTAAGAAAAGGAATTGAAGTACTCGCACGCGC 419
|.|||..|.||.|.|.|.||.||.||.|||||.||.||.||.||.||..|
BL01753___ger 370 GCAGTTTGTATTTTTACTGTGAGGAAGGGAATCGAGGTCCTTGCCCGTTC 419
BSNT_00662___ 420 TGCCGAACTTCTTTTCGGGGTCATGTATTTACTGGGC--GCGATC---GG 464
.|.|||.||..|.||.||..||||||.|| ||| ||..|| ||
BL01753___ger 420 AGGCGAGCTGTTGTTTGGCATCATGTTTT-----GGCTTGCTGTCACAGG 464
BSNT_00662___ 465 GCTCGTGCTGATTATTGTC-TCAGGCACTATAGACCCGCACAA---TTTA 510
.||..|.|||| ||.|.|| ||||||...||..|.|||.|..| |||
BL01753___ger 465 CCTAATCCTGA-TAGTTTCGTCAGGCTTGATCAAACCGAAAGAGCTTTT- 512
BSNT_00662___ 511 AAGCCGGTT-TTGGCAAACGGTATTTC----TCCTATCCTTCACTCTGTT 555
|||..|| |||| |||||| .| |||.||..||||..|.||.
BL01753___ger 513 --GCCCATTCTTGG-AAACGG----ACCCGGTCCGATGTTTCATGCCGTG 555
BSNT_00662___ 556 TTCACGCAGACCATGTACGTCCCATTTGGTGAAGTCGTTTTATTTGTGAT 605
||||||||.||..||||..|.||.|||||.||| ||
BL01753___ger 556 TTCACGCAAACGCTGTATTTTCCGTTTGGAGAA---------------AT 590
BSNT_00662___ 606 GAT----TTTCCCT--ATCCTG-----AATAACAGAAAAGATGTAA---- 640
.|| |||.|.| |||||| ..|||..||||||| ||
BL01753___ger 591 TATCGCCTTTACATTGATCCTGCCGTATTTAAAGGAAAAGA---AACTAG 637
BSNT_00662___ 641 --AAAAAA---------TGGGGATGATTGCCATGGCTATTAGCGGATTGG 679
|||||| |.|||| |||||| ||.|||||
BL01753___ger 638 CGAAAAAAGCCGGGTTGTTGGGA--ATTGCC------ATCAGCGG----- 674
BSNT_00662___ 680 TTGTGGCGCTCACCGTGGCGATTAAT------------ATCAGCGTGCTT 717
.||||.|.||||..||||| ||||||||||||
BL01753___ger 675 -------CCTCATCCTGGCTTTTAATGTCGCATTGAACATCAGCGTGCTT 717
BSNT_00662___ 718 GATGTTGATCTTACACTCAGATCCCAGTTCCCGCTT-------TTAAGTA 760
|..||.|||||.| |.||.| |.||.||||| .|.||||
BL01753___ger 718 GGCGTCGATCTCA-----ATATGC--GGTCGCGCTTCCCATTGCTGAGTA 760
BSNT_00662___ 761 CGATCCAGAC-AATCAAGGTCGAAGAATTTTTAGACCGGCTCGATGTCTT 809
|||||||||| |.|||| ||||..|||||.||.|||.||||.|||||.||
BL01753___ger 761 CGATCCAGACGATTCAA-GTCGCCGAATTCTTGGACAGGCTTGATGTATT 809
BSNT_00662___ 810 TTTTATGCTGGCGCTGATCATCGGCGGCTTCTTTAAGGTTAGCCTCTACT 859
|||.|||||.|.||||.|.||.|||||.||.||||||.|.|||.|.|.|.
BL01753___ger 810 TTTCATGCTCGTGCTGGTGATTGGCGGTTTTTTTAAGATGAGCATTTTCA 859
BSNT_00662___ 860 TATATGCC---ACTGTGGTTGGGACATCTACG--CTCTTTAAGGAAAAGA 904
|.|||||| ||.|..|..|.||| || .|.||.|||...||.|
BL01753___ger 860 TGTATGCCGTAACCGAAGGCGTGAC-----CGTTTTATTCAAGCTTAAAA 904
BSNT_00662___ 905 ATCTCTCTCAATTGGCTTATCCGATGGG----ATTGGGCATCTTAATCCT 950
|.|.|||..||.|.|.|.||...||.|| ||| ||.||.||..|
BL01753___ger 905 ACCCCTCCAAAGTTGTTCATGTCATCGGCATTATT----ATTTTGATTTT 950
BSNT_00662___ 951 TTCTTTAACGATCGCAACTAACTTTTCAGAGCACTTGAACGAAGGCTTGA 1000
.||..|..|.||.||.|..||..||||||||||..|.||.|||| ||
BL01753___ger 951 GTCCGTCTCCATTGCCAGCAATATTTCAGAGCATGTTAAAGAAG----GA 996
BSNT_00662___ 1001 A-CG---TGGTGCCGCTGTATATTCATTTGCCTTTTCA-ATTATTGTTTC 1045
| || |.||.||..|.|||.|.||||||||..|.|| .|.||..||.|
BL01753___ger 997 ATCGAGTTTGTTCCATTATATGTCCATTTGCCGATGCAGGTGATCCTTCC 1046
BSNT_00662___ 1046 CGCTCTTTCTGTTTATTGTGGCTGTTTG-GAAAAAGAAACGAAGAGAGAA 1094
|||| |||.|.|..||.||..|| |.|| |||||.||| ||.|.|.||
BL01753___ger 1047 CGCT-TTTATTTGCATAGTCACT-TATGTGAAAATGAA---AAAAAATAA 1091
BSNT_00662___ 1095 GTCAAAAGGGACAGGAATAAAGGAATGA 1122
.||||.||.||.| |||
BL01753___ger 1092 --AAAAAAGGCCATG--TAA-------- 1107
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