Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00656 and BL01750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence dna-align/BSNT_00656___yclG.1.5803.seq
# -bsequence dna-align/BL01750___yclG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00656___yclG-BL01750___yclG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00656___yclG-BL01750___yclG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00656___yclG
# 2: BL01750___yclG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1956
# Identity: 1150/1956 (58.8%)
# Similarity: 1150/1956 (58.8%)
# Gaps: 399/1956 (20.4%)
# Score: 2925.0
#
#
#=======================================
BSNT_00656___ 1 ATG--GCTGAATTCATATTAAATG-------CAGCGG------------A 29
.|| ||.|.|..|..||.||||| |||.|| |
BL01750___ycl 1 GTGCAGCAGCAACCTGATGAAATGAGAATGACAGTGGTTGACGCGACAAA 50
BSNT_00656___ 30 TTTCGGTGTTCCTGGAGATGGTAAAACGGATTCGACAGAACG-GATTAAT 78
.|||||.|.|...||.||.||.|||||.||.||.||| ||.| |||.||.
BL01750___ycl 51 GTTCGGCGCTGTCGGCGACGGCAAAACAGACTCCACA-AATGCGATCAAC 99
BSNT_00656___ 79 CAGTGCCT--CA-GTAC--AGCTGTTTCGAAAGGCTATCATACTGTCTGG 123
.|.||..| || |.|| || ||||..||.||..|.||.||.|||
BL01750___ycl 100 GAATGTTTGGCATGGACAAAG-----TCGATGGGATACAACACGGTATGG 144
BSNT_00656___ 124 TTTCCAAAGGGAACATATTTAATAGACGCAACG-----CTTGGCG----- 163
.|.||.||.||.||.||..|.||.||||..||| | ||||
BL01750___ycl 145 ATACCGAACGGCACGTACATGATTGACGGGACGAAAAAC--GGCGACCCG 192
BSNT_00656___ 164 -GAGATCTTAATCAGAGGTTTCGAAACGCGGGGATCATTGTTCCCGGCAA 212
|.|.|| .||||||...|||.||.||||.||||||||||||
BL01750___ycl 193 CGGGCTC---------CGTTTCGCGGCGCCGGCATCAATGTTCCCGGCAA 233
BSNT_00656___ 213 CCTTGAGATTATGATGGACCCCGAATGTATCATGAAAGTGATACCGAATA 262
..||||.|||.||||||||.|.||...|.||||.||.||.|..|||||.|
BL01750___ycl 234 TATTGAAATTTTGATGGACGCGGAGGCTGTCATCAAGGTAAAGCCGAACA 283
BSNT_00656___ 263 GTTCGTGGGGTTATTCCGCATTTTATGTAGGCAAGCAAGA---GAATATA 309
||||.|||||.||..|.||.||||||.||||| |.||.| | |||||
BL01750___ycl 284 GTTCATGGGGATACGCTGCTTTTTATATAGGC--GGAACATCCG-ATATA 330
BSNT_00656___ 310 ACTATTTCCGGAGGACA-AATTATCGGCGAACGGGATGAGCATACGTATG 358
|..||.|||||||| || .||.||.||.|||.|.|||||.||.||.|||.
BL01750___ycl 331 AAAATATCCGGAGG-CAGCATCATTGGTGAAAGAGATGAACACACATATA 379
BSNT_00656___ 359 TCTCGGCGGGGATAAGGTCAACCCATGAATGGGGCTTTGGCATATGTATT 408
...||||...| |||.|.||||||||||||||.||.||.||.||.||.
BL01750___ycl 380 CACCGGCCCCG---AGGCCGACCCATGAATGGGGATTCGGAATTTGCATC 426
BSNT_00656___ 409 GAAGGATGC-TCGAATGTTCTCATTGATGATGTGAAAATTTCCGATTTTA 457
||||| .|| ||.|||||..|||||||..|.||||.|||..|||||||||
BL01750___ycl 427 GAAGG-GGCGTCAAATGTCGTCATTGAACACGTGAGAATAGCCGATTTTA 475
BSNT_00656___ 458 CCGGCGATGGGATCATAGTCAGCCCAAGGGGATTAAAGACCAATCAAGAT 507
|.||.||.||.|||||..|||| |||.|| |.|| .|||..
BL01750___ycl 476 CAGGAGACGGAATCATTATCAG--CAACGG-----AGGA-----GAAGGG 513
BSNT_00656___ 508 TATCGAACGTCAGAGCAAATT----------ATCATCCGCCGCTGTGAGG 547
|||.||.|||||||||..||| || ||.||..
BL01750___ycl 514 TATAGACCGTCAGAGCGTATTCAGGTAACCAAT----------TGCGATA 553
BSNT_00656___ 548 TTCGGCGGTCGAGGAGAAATAACATTTCCATTACCGGATGTGAC-ATGGT 596
|..||||.||.||.|||||||||.|.|||||.||.||.||.||| |||.|
BL01750___ycl 554 TCAGGCGCTCCAGAAGAAATAACTTGTCCATCACAGGGTGCGACAATGTT 603
BSNT_00656___ 597 CACGGTGGAGGAGTGCTTGATTGAAGATGCCGGAACGGGGAATGGAACAG 646
|..|..|.|||| |||...||||.||||||.|||||.||.||.|||||.|
BL01750___ycl 604 CTTGTAGAAGGA-TGCGAAATTGCAGATGCGGGAACAGGAAACGGAACCG 652
BSNT_00656___ 647 CCCCGAAATTCGGAATTGACATTGAAGGATATGGCGAAGGTGACGTTGAT 696
|.||....||.||.|||||.||.|||||.|||.|.|||||...|.|.|..
BL01750___ycl 653 CTCCTTGCTTTGGCATTGATATAGAAGGCTATAGTGAAGGAAGCATCGTC 702
BSNT_00656___ 697 TATGAGGAACCGATTAATGT-ATCAATTC-GCAATAACCACTTTGTTGGA 744
|||||.|||||..|.||||| |||| || |.||.||| .|||| |
BL01750___ycl 703 TATGAAGAACCCGTCAATGTCATCA--TCAGAAACAAC----GTGTT--A 744
BSNT_00656___ 745 AACG----TTTCAA--GTTCTGTGACCAATTTTAACGGGTA----TGGCA 784
||.| |.|||| .|.|.||..||||.||.||| |||| ||.||
BL01750___ycl 745 AAAGGCAATGTCAATCATGCCGTTTCCAACTTCAAC-GGTACTTCTGTCA 793
BSNT_00656___ 785 TTTTAATAGAAGGAAAT----CACTCTGACAATACAA--TCAGCTACGGA 828
|.||.|||||.||| || |||..|||.| ||| |||||.
BL01750___ycl 794 ---TCATCGAAGGCAATGTTGCA----GACGGTACCATTTCA--TACGGC 834
BSNT_00656___ 829 TATGGGAC-------------GCAAACA--GTGATCAAGGGAAATATACT 863
|||||.|| ||||||| .|.||||||..||||
BL01750___ycl 835 TATGGAACGGGGACGACGATTGCAAACAATATCATCAAGAAAAAT----- 879
BSNT_00656___ 864 GAGGCGCCCTGAAGACGCGGCGGCTGCGCCAAGAGTCGGGATAACCGGAC 913
||.|||..|.|.| |||.|.|| |.| ||.||.|.|||.|
BL01750___ycl 880 -------CCCGAATTCACCG-GGCAGAGC----ACT-GGAATTAACGGCC 916
BSNT_00656___ 914 TCGGTGTA-------TCACAAGGAAAAGAGACCAGTGATGCAGTGATCGC 956
|||||||| | ||||.|.||| ||.|||||.||.||...
BL01750___ycl 917 TCGGTGTAGGGGCTTT-----GGAAGAAAGA--AGCGATGCCGTAATAAA 959
BSNT_00656___ 957 TGGCAACCTCATTACCGGATTTTCAACTGGAATTGATGTCAGGGGAAAGA 1006
.||.||..|.|||.||||.|||.|.||.||.||.|||.||.|.|||||.|
BL01750___ycl 960 GGGAAATTTGATTTCCGGTTTTACGACAGGCATAGATATCCGCGGAAAAA 1009
BSNT_00656___ 1007 GCGTTCTTGTGACGAACAACAAAATCAGCAACTTTGAAAACACAGGGATA 1056
|||||.|||..|||...||.||||||.|..|.||||.|||..|.||.||.
BL01750___ycl 1010 GCGTTTTTGCTACGGGGAATAAAATCCGTGATTTTGTAAATGCCGGAATT 1059
BSNT_00656___ 1057 TTGGTTTATC----------AGTCTTCCGACGTAAAGGTAGACGGAAACC 1096
.|.|.||||| ||||||| .|.||.|||||..
BL01750___ycl 1060 CTTGCTTATCAAGCGTCGCAAGTCTTC----------ATTGAAGGAAATT 1099
BSNT_00656___ 1097 AAATTCAAAACGGACTGT--CTGAAACAAGGCGCAGCATCGGT-----CT 1139
|.|||.||||| ||| || |||||..||||..|.|||.||.| |.
BL01750___ycl 1100 ATATTGAAAAC-GAC-GTACCTGAACAAAGGTCCGGCACCGCTTTCAGCA 1147
BSNT_00656___ 1140 TCGCGCAGTGCTGTCAGA-----TGACATCGCTTTTCTG--AATAACTGT 1182
||.|||| .||||| |.||| |.|||.| || |
BL01750___ycl 1148 TCACGCA-----ATCAGACAATGTAACA----TGTTCCGGCAA------T 1182
BSNT_00656___ 1183 CTCATT-CAA--GTCGTTGACGGTGT------------GAACG-TTTCCG 1216
|..||| ||| ||||||...|.||| ||||| ..|||
BL01750___ycl 1183 CATATTGCAAATGTCGTTCTTGCTGTCAGGAGCACAGGGAACGACGTCC- 1231
BSNT_00656___ 1217 GCGGAAAT-----ATGA--TCATTAAAGATAATCTCCTGAGAAAATTCAG 1259
|||| ||.| ||||| |||..|.|.|||.||
BL01750___ycl 1232 ----AAATCAAGCATAACGTCATT-AAGCAATTTTCCAGA---------- 1266
BSNT_00656___ 1260 CCGGGGCATTTGGATTGCTCAAGGGAACGCGGTGATTGAAGGGAATATAC 1309
|||||.|||||..|||||||.||.||.||.||.||||| |.||
BL01750___ycl 1267 ----GGCATATGGATATCTCAAGGAAATGCTGTAATAGAAGG----AAAC 1308
BSNT_00656___ 1310 TGAAT----CCTGACGCGTTTGAAGCAGTGCCGGAATCATATTCTGTTTC 1355
|..|| ||..|||..|||.||.|.||||||||.||||||.||||.||
BL01750___ycl 1309 TTTATTTCGCCGAACGGCTTTCAAACGGTGCCGGAGTCATATGCTGTATC 1358
BSNT_00656___ 1356 CGTCACAAACAATGC--CGGC-GCCA-TCATCAAAA-ACAAT-ACATTTA 1399
|||||||||||..|| |||| |..| |||.||||| ||.|| |||
BL01750___ycl 1359 CGTCACAAACACAGCTTCGGCAGTTATTCAACAAAACACCATCACA---- 1404
BSNT_00656___ 1400 AAGAG-TTCAAAAATTACCCCATTTATTGCTCCACAAGTGCGAAAACCTC 1448
.| ||||.|||.|..||.||.||.|||||.||||.|..|.|.||...
BL01750___ycl 1405 ---CGCTTCAGAAACTTTCCAATATACTGCTCGACAAATCAGCATACAAA 1451
BSNT_00656___ 1449 AATTATCGGCAACCACTTAGAGAGA-TCTCCGCTTTTGGTCACCATCTAT 1497
|||||||||.|||.|..|.|| ||| ||.|||||..|.|||||..|.|.|
BL01750___ycl 1452 AATTATCGGAAACTATATTGA-AGATTCACCGCTGATCGTCACGGTGTTT 1500
BSNT_00656___ 1498 ATCAGCGCCGGTGTGCATGAGATTTTTGATAATACCATTTCAGTCAACAG 1547
.|||.|..|||....||.|||.||.|.|..|||||.||..|..|||.|||
BL01750___ycl 1501 CTCACCCGCGGAACACACGAGGTTATCGGCAATACGATAACGCTCAGCAG 1550
BSNT_00656___ 1548 AACAGCCGGGAATCCGATTG----------TGATTTATATCAATGGCTCT 1587
|||| ||| ||| |.||||||.| ||.|
BL01750___ycl 1551 ----GCCG----TCC--TTGCCGGCTGTCCTCATTTATCT---TGAC--- 1584
BSNT_00656___ 1588 GCAGGCTCTATCGTCTCAGGAAAC----ACCATCAATAACCTCTCCGCGG 1633
|.|||||| |||..| |.|.||||.|||
BL01750___ycl 1585 -------CAATCGTC---GGACTCGGCGATCCTCAACAAC---------- 1614
BSNT_00656___ 1634 ACACTGCGACAGCTATTC--AAACAA---------CCA--CATCAACCAA 1670
||.||.||| |||.||.| ||.||| ||| || ||||||
BL01750___ycl 1615 ACGCTTCGA-AGCAATACGGAAGCAAGAGTAACGGCCATTCA--AACCAA 1661
BSNT_00656___ 1671 TTC-------CAAA-----ATCATCGGCAA-CCGCATTTTTAAAGGGA-- 1705
|.| |||| ||||||||||| .|| |||.|.|||||.|
BL01750___ycl 1662 TACGTCAAGGCAAACGCTCATCATCGGCAATACG-ATTGTCAAAGGAATG 1710
BSNT_00656___ 1706 --CCAT---CAACAAACATAGCAGTGATACAATAGACGGCAATAT-GATT 1749
|||| ||.|||||| ||||||.|..|.||.||||| || .
BL01750___ycl 1711 ATCCATTCCCACCAAACA-------GATACAGTCAATGGAAATATCGA-A 1752
BSNT_00656___ 1750 GTCTGA 1755
||.|.|
BL01750___ycl 1753 GTTTAA 1758
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