Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00647 and BL01741
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00647___yclC.1.5803.seq
# -bsequence dna-align/BL01741___yclC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00647___yclC-BL01741___yclC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00647___yclC-BL01741___yclC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00647___yclC
# 2: BL01741___yclC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1429
# Identity: 1144/1429 (80.1%)
# Similarity: 1144/1429 (80.1%)
# Gaps: 14/1429 ( 1.0%)
# Score: 4572.0
#
#
#=======================================
BSNT_00647___ 1 ATGGCTTATCAAGATTTCAGAGAATTTCT-----CGCTGCCCTTGAAAAA 45
|||||||||||||||||.|||||.|||.| ||||| .|||||
BL01741___ycl 1 ATGGCTTATCAAGATTTTAGAGATTTTTTAAATACGCTG-----AAAAAA 45
BSNT_00647___ 46 GAAGGACAGCTGCTTACAGTGAATGAAGAGGTAAAGCCGGAACCGGATTT 95
|||||||||||.|||..|||..|.||||||||.|||||||||||.|||||
BL01741___ycl 46 GAAGGACAGCTTCTTGAAGTCCAGGAAGAGGTGAAGCCGGAACCCGATTT 95
BSNT_00647___ 96 AGGGGCCGCCGCACGGGCAGCCAGCAATCTTGGCGATAAAAGCCCCGCGC 145
.||.||.||.|||||.||.||||.|||.||.||.||.|||...|||||.|
BL01741___ycl 96 GGGAGCAGCTGCACGCGCCGCCAACAACCTCGGAGACAAATCACCCGCTC 145
BSNT_00647___ 146 TCTTATTTAACAACATTTACGGCTATCATAACGCCCAAATTGCGATGAAT 195
|.|||||.||||||||||||||||||.|.||.||||||||.|||.|||||
BL01741___ycl 146 TTTTATTCAACAACATTTACGGCTATAACAATGCCCAAATCGCGCTGAAT 195
BSNT_00647___ 196 GTCATCGGCTCTTGGCCAAACCATGCCATGATGCTGGGCATGCCGAAAGA 245
||.||||||||.|||||.|||||.||..|.|||||.|||.|.||.|||||
BL01741___ycl 196 GTAATCGGCTCCTGGCCGAACCACGCATTAATGCTCGGCCTTCCAAAAGA 245
BSNT_00647___ 246 CACACCGGTAAAAGAACAGTTTTTTGAATTCGCAAAGCGTTATGACCAGT 295
|||.|||||.||||||||.||.|||||.|||||....||||||.|.||||
BL01741___ycl 246 CACGCCGGTTAAAGAACAATTCTTTGAGTTCGCGCGCCGTTATAATCAGT 295
BSNT_00647___ 296 TTCCGATGCCGGT-CAAACGTGAGGAAACAGCACCATTTCATGAAAATGA 344
||||..|....|| |||| |.|||||.|||||.||.|||||.|||||.||
BL01741___ycl 296 TTCCAGTAAAAGTGCAAA-GAGAGGAGACAGCGCCGTTTCACGAAAACGA 344
BSNT_00647___ 345 AATCACAGAAGATATCAATTTGTTCGATATACTGCCTCTTTTCAGAATTA 394
||||||||||||.|||||..||||.||.||.|||||.||.|||.|.||.|
BL01741___ycl 345 AATCACAGAAGACATCAACCTGTTTGACATTCTGCCGCTCTTCCGCATCA 394
BSNT_00647___ 395 ACCAAGGTGATGGAGGCTACTATTTAGACAAAGCGTGTGTCATCTCCCGT 444
|.||.||.||.||.||||..|||||||||||.||.||.|||||.||..|.
BL01741___ycl 395 ATCAGGGCGACGGCGGCTTTTATTTAGACAAGGCATGCGTCATTTCGAGA 444
BSNT_00647___ 445 GATCTTGAAGACCCTGACAACTTCGGCAAACAAAATGTCGGCATTTACAG 494
|||.|.||.||.||.|||.||||||||||.|||||.||||||||.|||||
BL01741___ycl 445 GATGTCGAGGATCCGGACCACTTCGGCAAGCAAAACGTCGGCATGTACAG 494
BSNT_00647___ 495 AATGCAGGTCAAAGGAAAAGACCGCCTCGGCATTCAGCCTGTCCCGCAGC 544
|.|||||||.|||||.|||||||||||||||||||||||.||||||||||
BL01741___ycl 495 ATTGCAGGTAAAAGGCAAAGACCGCCTCGGCATTCAGCCCGTCCCGCAGC 544
BSNT_00647___ 545 ACGATATTGCAATCCATCTGCGCCAAGCTGAAGAACGCGGCATCAATCTT 594
|.||.|||||.|||||.|||||.||.||||||||.||||||...||.||.
BL01741___ycl 545 ATGACATTGCGATCCACCTGCGTCAGGCTGAAGAGCGCGGCGAAAACCTG 594
BSNT_00647___ 595 CCGGTCACCATTGCGCTCGGCTGTGAGCCGGTCATTACAACGGCGGCATC 644
||.|||||.||||||||||||||.||.|||||.|||.|||||||||||||
BL01741___ycl 595 CCTGTCACGATTGCGCTCGGCTGCGAACCGGTTATTGCAACGGCGGCATC 644
BSNT_00647___ 645 GACTCCGCTTCTCTATGATCAATCAGAATACGAAATGGCAGGCGCGATTC 694
.||.|||||..|.||.|||||||||||||||||.||||||||.||..|.|
BL01741___ycl 645 CACACCGCTCTTATACGATCAATCAGAATACGAGATGGCAGGGGCCCTGC 694
BSNT_00647___ 695 AAGGCGAACCATATCGCATCGTCAAATCAAAGCTGTCTGATCTT-GATGT 743
||||||||||||||...||||||||||||||.|||||| |.||| |||.|
BL01741___ycl 695 AAGGCGAACCATATAAAATCGTCAAATCAAAACTGTCT-AACTTAGATAT 743
BSNT_00647___ 744 TCCTTGGGGTGCTGAAGTGGTGCTTGAAGGTGAGATTATTGCCGGAGAGC 793
.||.|||||.||.||||||||.||.|||||||||||..||||.||.||.|
BL01741___ycl 744 CCCATGGGGCGCAGAAGTGGTTCTCGAAGGTGAGATCCTTGCGGGCGAAC 793
BSNT_00647___ 794 GCGAATATGAAGGGCCGTTCGGTGAATTCACAGGCCATTATTCCGGCGGA 843
||||.||||||||.||||||||.||.||.||.|||||.|||||.||||||
BL01741___ycl 794 GCGAGTATGAAGGTCCGTTCGGCGAGTTTACCGGCCACTATTCAGGCGGA 843
BSNT_00647___ 844 CGCAGCATGCCGATTATCAAAATTAAACGCGTCTATCACAGAAACAATCC 893
||.|||||||||||.||||||||.||.|||||||..|||.|.||||||||
BL01741___ycl 844 CGAAGCATGCCGATCATCAAAATCAAGCGCGTCTGCCACCGCAACAATCC 893
BSNT_00647___ 894 GATCTTTGAACATTTATACTTAGGCATGCCTTGGACAGAATGCGATTACA 943
|||.||||||||..|.||.|||||||||||||||||.||....||.||.|
BL01741___ycl 894 GATTTTTGAACACCTGTATTTAGGCATGCCTTGGACTGAGGTTGACTATA 943
BSNT_00647___ 944 TGATTGGCATTAACACATGCGTGCCGCTTTATCAGCAGTTAAAAGAAGCG 993
||.|.||||||||.|||||.|||||||||||.||||||.|.|||||.|||
BL01741___ycl 944 TGGTCGGCATTAATACATGTGTGCCGCTTTACCAGCAGCTTAAAGAGGCG 993
BSNT_00647___ 994 TACCCGAACGAAATTGTGGCAGTGAACGCCATGTACACACACGGTTTAAT 1043
||.|||||.||||||||.||.||.|||||.|||||.||.|||||.||.||
BL01741___ycl 994 TATCCGAATGAAATTGTCGCGGTAAACGCGATGTATACGCACGGCTTGAT 1043
BSNT_00647___ 1044 CGCGATTGTTTCCACAAAAACCCGCTATGGCGGATTTGCGAAAGCGGTCG 1093
|||.|||||.||.||.||||.||||||.||||||||.||.|||||.||||
BL01741___ycl 1044 CGCCATTGTATCAACGAAAAGCCGCTACGGCGGATTCGCCAAAGCCGTCG 1093
BSNT_00647___ 1094 GCATGCGCGCACTCACAACGCCGCACGGACTCGGCTACTGCAAAATGGTC 1143
||||||||||.||.|||||.||||||||.||||||||||||||||||||.
BL01741___ycl 1094 GCATGCGCGCGCTGACAACTCCGCACGGCCTCGGCTACTGCAAAATGGTG 1143
BSNT_00647___ 1144 ATTGTCGTTGATGAGGATGTCGATCCATTCAACCTTCCGCAGGTCATGTG 1193
||..|||||||.||.||.||||||||.||.|||||.|||||.||.|||||
BL01741___ycl 1144 ATCCTCGTTGACGAAGACGTCGATCCGTTTAACCTCCCGCAAGTGATGTG 1193
BSNT_00647___ 1194 GGCGCTTTCGACCAAAATGCATCCGAAACACGATGCGGTCATCATTCCGG 1243
|||..|.||.||.|||||||||||||||||||||||.||||||||.||||
BL01741___ycl 1194 GGCAATCTCAACGAAAATGCATCCGAAACACGATGCAGTCATCATCCCGG 1243
BSNT_00647___ 1244 ACTTATCTGTCCTGCCGCTTGATCCGGGATCCAATCCATCAGGAATCACT 1293
|.|||||.||..||.||||.|||||.||.||..|.||..|.||||||||.
BL01741___ycl 1244 ATTTATCCGTTTTGGCGCTAGATCCAGGTTCTGAACCGGCGGGAATCACC 1293
BSNT_00647___ 1294 CACAAAATGATTCTCGACGCCACTACACCGGTTGCGCCGGAAACAAGAGG 1343
|||||||||||..|.|||||.||.||.||||.|||.|||||||||||.||
BL01741___ycl 1294 CACAAAATGATATTGGACGCGACAACGCCGGCTGCACCGGAAACAAGGGG 1343
BSNT_00647___ 1344 CCATTATTCACAGCCGCTTGATTCTCCGCTAACAACGAAAGAATGGGAAC 1393
.||.||||||||||||||.|||||.||..||..|||||||||.||||||.
BL01741___ycl 1344 ACACTATTCACAGCCGCTCGATTCCCCTATAGGAACGAAAGAGTGGGAAG 1393
BSNT_00647___ 1394 AAAAACTAATGGATTTAATGAATAAATAA 1422
.||||.|||||.||.|..|.|||.|||||
BL01741___ycl 1394 CAAAATTAATGAATCTGCTAAATCAATAA 1422
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