Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00647 and BL01741

See Amino acid alignment / Visit BSNT_00647 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_00647___yclC.1.5803.seq
#    -bsequence dna-align/BL01741___yclC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00647___yclC-BL01741___yclC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00647___yclC-BL01741___yclC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00647___yclC
# 2: BL01741___yclC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1429
# Identity:    1144/1429 (80.1%)
# Similarity:  1144/1429 (80.1%)
# Gaps:          14/1429 ( 1.0%)
# Score: 4572.0
# 
#
#=======================================

BSNT_00647___      1 ATGGCTTATCAAGATTTCAGAGAATTTCT-----CGCTGCCCTTGAAAAA     45
                     |||||||||||||||||.|||||.|||.|     |||||     .|||||
BL01741___ycl      1 ATGGCTTATCAAGATTTTAGAGATTTTTTAAATACGCTG-----AAAAAA     45

BSNT_00647___     46 GAAGGACAGCTGCTTACAGTGAATGAAGAGGTAAAGCCGGAACCGGATTT     95
                     |||||||||||.|||..|||..|.||||||||.|||||||||||.|||||
BL01741___ycl     46 GAAGGACAGCTTCTTGAAGTCCAGGAAGAGGTGAAGCCGGAACCCGATTT     95

BSNT_00647___     96 AGGGGCCGCCGCACGGGCAGCCAGCAATCTTGGCGATAAAAGCCCCGCGC    145
                     .||.||.||.|||||.||.||||.|||.||.||.||.|||...|||||.|
BL01741___ycl     96 GGGAGCAGCTGCACGCGCCGCCAACAACCTCGGAGACAAATCACCCGCTC    145

BSNT_00647___    146 TCTTATTTAACAACATTTACGGCTATCATAACGCCCAAATTGCGATGAAT    195
                     |.|||||.||||||||||||||||||.|.||.||||||||.|||.|||||
BL01741___ycl    146 TTTTATTCAACAACATTTACGGCTATAACAATGCCCAAATCGCGCTGAAT    195

BSNT_00647___    196 GTCATCGGCTCTTGGCCAAACCATGCCATGATGCTGGGCATGCCGAAAGA    245
                     ||.||||||||.|||||.|||||.||..|.|||||.|||.|.||.|||||
BL01741___ycl    196 GTAATCGGCTCCTGGCCGAACCACGCATTAATGCTCGGCCTTCCAAAAGA    245

BSNT_00647___    246 CACACCGGTAAAAGAACAGTTTTTTGAATTCGCAAAGCGTTATGACCAGT    295
                     |||.|||||.||||||||.||.|||||.|||||....||||||.|.||||
BL01741___ycl    246 CACGCCGGTTAAAGAACAATTCTTTGAGTTCGCGCGCCGTTATAATCAGT    295

BSNT_00647___    296 TTCCGATGCCGGT-CAAACGTGAGGAAACAGCACCATTTCATGAAAATGA    344
                     ||||..|....|| |||| |.|||||.|||||.||.|||||.|||||.||
BL01741___ycl    296 TTCCAGTAAAAGTGCAAA-GAGAGGAGACAGCGCCGTTTCACGAAAACGA    344

BSNT_00647___    345 AATCACAGAAGATATCAATTTGTTCGATATACTGCCTCTTTTCAGAATTA    394
                     ||||||||||||.|||||..||||.||.||.|||||.||.|||.|.||.|
BL01741___ycl    345 AATCACAGAAGACATCAACCTGTTTGACATTCTGCCGCTCTTCCGCATCA    394

BSNT_00647___    395 ACCAAGGTGATGGAGGCTACTATTTAGACAAAGCGTGTGTCATCTCCCGT    444
                     |.||.||.||.||.||||..|||||||||||.||.||.|||||.||..|.
BL01741___ycl    395 ATCAGGGCGACGGCGGCTTTTATTTAGACAAGGCATGCGTCATTTCGAGA    444

BSNT_00647___    445 GATCTTGAAGACCCTGACAACTTCGGCAAACAAAATGTCGGCATTTACAG    494
                     |||.|.||.||.||.|||.||||||||||.|||||.||||||||.|||||
BL01741___ycl    445 GATGTCGAGGATCCGGACCACTTCGGCAAGCAAAACGTCGGCATGTACAG    494

BSNT_00647___    495 AATGCAGGTCAAAGGAAAAGACCGCCTCGGCATTCAGCCTGTCCCGCAGC    544
                     |.|||||||.|||||.|||||||||||||||||||||||.||||||||||
BL01741___ycl    495 ATTGCAGGTAAAAGGCAAAGACCGCCTCGGCATTCAGCCCGTCCCGCAGC    544

BSNT_00647___    545 ACGATATTGCAATCCATCTGCGCCAAGCTGAAGAACGCGGCATCAATCTT    594
                     |.||.|||||.|||||.|||||.||.||||||||.||||||...||.||.
BL01741___ycl    545 ATGACATTGCGATCCACCTGCGTCAGGCTGAAGAGCGCGGCGAAAACCTG    594

BSNT_00647___    595 CCGGTCACCATTGCGCTCGGCTGTGAGCCGGTCATTACAACGGCGGCATC    644
                     ||.|||||.||||||||||||||.||.|||||.|||.|||||||||||||
BL01741___ycl    595 CCTGTCACGATTGCGCTCGGCTGCGAACCGGTTATTGCAACGGCGGCATC    644

BSNT_00647___    645 GACTCCGCTTCTCTATGATCAATCAGAATACGAAATGGCAGGCGCGATTC    694
                     .||.|||||..|.||.|||||||||||||||||.||||||||.||..|.|
BL01741___ycl    645 CACACCGCTCTTATACGATCAATCAGAATACGAGATGGCAGGGGCCCTGC    694

BSNT_00647___    695 AAGGCGAACCATATCGCATCGTCAAATCAAAGCTGTCTGATCTT-GATGT    743
                     ||||||||||||||...||||||||||||||.|||||| |.||| |||.|
BL01741___ycl    695 AAGGCGAACCATATAAAATCGTCAAATCAAAACTGTCT-AACTTAGATAT    743

BSNT_00647___    744 TCCTTGGGGTGCTGAAGTGGTGCTTGAAGGTGAGATTATTGCCGGAGAGC    793
                     .||.|||||.||.||||||||.||.|||||||||||..||||.||.||.|
BL01741___ycl    744 CCCATGGGGCGCAGAAGTGGTTCTCGAAGGTGAGATCCTTGCGGGCGAAC    793

BSNT_00647___    794 GCGAATATGAAGGGCCGTTCGGTGAATTCACAGGCCATTATTCCGGCGGA    843
                     ||||.||||||||.||||||||.||.||.||.|||||.|||||.||||||
BL01741___ycl    794 GCGAGTATGAAGGTCCGTTCGGCGAGTTTACCGGCCACTATTCAGGCGGA    843

BSNT_00647___    844 CGCAGCATGCCGATTATCAAAATTAAACGCGTCTATCACAGAAACAATCC    893
                     ||.|||||||||||.||||||||.||.|||||||..|||.|.||||||||
BL01741___ycl    844 CGAAGCATGCCGATCATCAAAATCAAGCGCGTCTGCCACCGCAACAATCC    893

BSNT_00647___    894 GATCTTTGAACATTTATACTTAGGCATGCCTTGGACAGAATGCGATTACA    943
                     |||.||||||||..|.||.|||||||||||||||||.||....||.||.|
BL01741___ycl    894 GATTTTTGAACACCTGTATTTAGGCATGCCTTGGACTGAGGTTGACTATA    943

BSNT_00647___    944 TGATTGGCATTAACACATGCGTGCCGCTTTATCAGCAGTTAAAAGAAGCG    993
                     ||.|.||||||||.|||||.|||||||||||.||||||.|.|||||.|||
BL01741___ycl    944 TGGTCGGCATTAATACATGTGTGCCGCTTTACCAGCAGCTTAAAGAGGCG    993

BSNT_00647___    994 TACCCGAACGAAATTGTGGCAGTGAACGCCATGTACACACACGGTTTAAT   1043
                     ||.|||||.||||||||.||.||.|||||.|||||.||.|||||.||.||
BL01741___ycl    994 TATCCGAATGAAATTGTCGCGGTAAACGCGATGTATACGCACGGCTTGAT   1043

BSNT_00647___   1044 CGCGATTGTTTCCACAAAAACCCGCTATGGCGGATTTGCGAAAGCGGTCG   1093
                     |||.|||||.||.||.||||.||||||.||||||||.||.|||||.||||
BL01741___ycl   1044 CGCCATTGTATCAACGAAAAGCCGCTACGGCGGATTCGCCAAAGCCGTCG   1093

BSNT_00647___   1094 GCATGCGCGCACTCACAACGCCGCACGGACTCGGCTACTGCAAAATGGTC   1143
                     ||||||||||.||.|||||.||||||||.||||||||||||||||||||.
BL01741___ycl   1094 GCATGCGCGCGCTGACAACTCCGCACGGCCTCGGCTACTGCAAAATGGTG   1143

BSNT_00647___   1144 ATTGTCGTTGATGAGGATGTCGATCCATTCAACCTTCCGCAGGTCATGTG   1193
                     ||..|||||||.||.||.||||||||.||.|||||.|||||.||.|||||
BL01741___ycl   1144 ATCCTCGTTGACGAAGACGTCGATCCGTTTAACCTCCCGCAAGTGATGTG   1193

BSNT_00647___   1194 GGCGCTTTCGACCAAAATGCATCCGAAACACGATGCGGTCATCATTCCGG   1243
                     |||..|.||.||.|||||||||||||||||||||||.||||||||.||||
BL01741___ycl   1194 GGCAATCTCAACGAAAATGCATCCGAAACACGATGCAGTCATCATCCCGG   1243

BSNT_00647___   1244 ACTTATCTGTCCTGCCGCTTGATCCGGGATCCAATCCATCAGGAATCACT   1293
                     |.|||||.||..||.||||.|||||.||.||..|.||..|.||||||||.
BL01741___ycl   1244 ATTTATCCGTTTTGGCGCTAGATCCAGGTTCTGAACCGGCGGGAATCACC   1293

BSNT_00647___   1294 CACAAAATGATTCTCGACGCCACTACACCGGTTGCGCCGGAAACAAGAGG   1343
                     |||||||||||..|.|||||.||.||.||||.|||.|||||||||||.||
BL01741___ycl   1294 CACAAAATGATATTGGACGCGACAACGCCGGCTGCACCGGAAACAAGGGG   1343

BSNT_00647___   1344 CCATTATTCACAGCCGCTTGATTCTCCGCTAACAACGAAAGAATGGGAAC   1393
                     .||.||||||||||||||.|||||.||..||..|||||||||.||||||.
BL01741___ycl   1344 ACACTATTCACAGCCGCTCGATTCCCCTATAGGAACGAAAGAGTGGGAAG   1393

BSNT_00647___   1394 AAAAACTAATGGATTTAATGAATAAATAA   1422
                     .||||.|||||.||.|..|.|||.|||||
BL01741___ycl   1394 CAAAATTAATGAATCTGCTAAATCAATAA   1422


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