Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00608 and BL01718
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence dna-align/BSNT_00608___yckE.1.5803.seq
# -bsequence dna-align/BL01718___yckE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00608___yckE-BL01718___yckE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00608___yckE-BL01718___yckE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00608___yckE
# 2: BL01718___yckE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1457
# Identity: 1108/1457 (76.0%)
# Similarity: 1108/1457 (76.0%)
# Gaps: 43/1457 ( 3.0%)
# Score: 4143.5
#
#
#=======================================
BSNT_00608___ 1 ATGATCCACCAGCATCCAAAATCTTTTCCGAAACATTTTTTGTGGGGCTC 50
|||||.||.||||..|.|....|.|||||..|.|||||..|.|||||.||
BL01718___yck 1 ATGATTCATCAGCGACTACGCCCATTTCCAGATCATTTCCTATGGGGATC 50
BSNT_00608___ 51 TGCTTCTGCAGCGTACCAGATTGAAGGCGCTTGGAATGAAGATGGCAAAG 100
.||.||||||||.||||||||.|||||.||.|||||||||||.|||||.|
BL01718___yck 51 AGCATCTGCAGCCTACCAGATCGAAGGAGCCTGGAATGAAGACGGCAAGG 100
BSNT_00608___ 101 GCCCTTCTGTTTGGGATGTGTTTACGAAAATACCGGGCAAAACGTTTAAA 150
|.|.|||.||||||||||||||.||.||.||.||.||.||||||||||||
BL01718___yck 101 GGCTTTCGGTTTGGGATGTGTTCACAAAGATTCCCGGAAAAACGTTTAAA 150
BSNT_00608___ 151 GGAACCAATGGCGAGATTGCGGTTGACCATTATCACCGATTTAAAGAAGA 200
||||.||||||.||.||||||||.||||||||.|||||.|||||||||||
BL01718___yck 151 GGAAGCAATGGAGACATTGCGGTCGACCATTACCACCGTTTTAAAGAAGA 200
BSNT_00608___ 201 TGTCGCTCTGATGGCTGAGATGGGGTTAAAAGCATATCGATTTTCCGTCA 250
|||.|||.|.||||||||||||||||||||||||||.||.|||||.||||
BL01718___yck 201 TGTTGCTTTAATGGCTGAGATGGGGTTAAAAGCATACCGCTTTTCAGTCA 250
BSNT_00608___ 251 GCTGGCCACGGGTTTTTCCAAAAGGAAAAGGAGAGATCAATGAAGCAGGT 300
|||||||..||.|||||||..|.||.|..|||||...|||||||.|.|||
BL01718___yck 251 GCTGGCCGAGGATTTTTCCGCAGGGCAGGGGAGAAGCCAATGAATCGGGT 300
BSNT_00608___ 301 CT-AGCGTTTTACGATAGTC-TGATTGATGAATTGCTTTCTCATCACATC 348
.| || .||||||||| |.| |||||.||||..|.|||.|||||.|.||.
BL01718___yck 301 TTGAG-ATTTTACGAT-GACTTGATTAATGAGCTCCTTGCTCATGATATT 348
BSNT_00608___ 349 GAGCCGGTTCTGACTTTATATCACTGGGATTTGCCTCAAGCGCTTATGGA 398
||.||.|||.||||..|.|||||.||||||.|.||.||.||..|.|||||
BL01718___yck 349 GAACCTGTTTTGACGCTTTATCATTGGGATCTTCCCCAGGCTTTAATGGA 398
BSNT_00608___ 399 CGAATACGGCGGGTTTGAATCCAGAAACATCATAGAGGATTTTAATCACT 448
.|||||||||||.|||||||||||||..||.|||||||||||.|||...|
BL01718___yck 399 TGAATACGGCGGCTTTGAATCCAGAAGAATTATAGAGGATTTCAATGCGT 448
BSNT_00608___ 449 ACTGTATTACTCTTTATAAACGTTTTGGAGACAGGGTGAAATATTGGGT- 497
|.||..||||.||.|||||.||.|.|||||.||||||.|||||||||||
BL01718___yck 449 ATTGCGTTACGCTCTATAAGCGGTATGGAGGCAGGGTTAAATATTGGGTG 498
BSNT_00608___ 498 TACGTTAAATGAACAGAACTACAATTTTAATCACGGATTTATTACAGCCA 547
|.|.|| ||.||.||.||.|||||.|||||||||||.|||||.|||||.|
BL01718___yck 499 TCCCTT-AACGAGCAAAATTACAACTTTAATCACGGCTTTATCACAGCGA 547
BSNT_00608___ 548 TGCATCCGCCTGGAGTGAAAGACAGAAAACGATTTTACGAAGCAAACCAT 597
|||||||.||.||.|||||.||.||||||||.||.||.||.||.||||||
BL01718___yck 548 TGCATCCCCCGGGTGTGAAGGATAGAAAACGCTTCTATGAGGCTAACCAT 597
BSNT_00608___ 598 ATTGCGTTTCTGGCTAATGCAAAAGCCATCGAATCATTTAGAGAATATGT 647
|||||.|||||.||.||||||||.||.|||||.||.|||.|....|||||
BL01718___yck 598 ATTGCATTTCTAGCGAATGCAAAGGCAATCGATTCTTTTCGCCGGTATGT 647
BSNT_00608___ 648 GCCTGAAGGCAAAATAGGTCCTAGCTTTGCATATTCTCCGGCTTACCCTT 697
.||.||.||.|||||.||.||.||.|||||.|||||.||.||.||.||..
BL01718___yck 648 TCCCGATGGAAAAATCGGACCGAGTTTTGCTTATTCGCCTGCATATCCCC 697
BSNT_00608___ 698 TATTAAGCCATCCAGAGGATATACTGGCATTTGAAAACGCCGAAGAATTT 747
|.|..||||.|||.||.|||||.||.||.||.||.||.|||||.||||||
BL01718___yck 698 TCTCCAGCCGTCCGGATGATATCCTCGCCTTCGAGAATGCCGAGGAATTT 747
BSNT_00608___ 748 ATGAACAATTGGTGGCTTGACATGTATTGCTGGGGAACCTACCCGCAAAT 797
|..|||.|||||||||||||.|||||.|||.|||||||.||.|||.|.||
BL01718___yck 748 ACAAACTATTGGTGGCTTGATATGTACTGCCGGGGAACATATCCGGACAT 797
BSNT_00608___ 798 TCCATTCCGCTACTT---GGAAAAACAGGGATGGGCGCCGACAATCGAAG 844
.||.||....||..| ||||||| ||.||||||||||||||.||||
BL01718___yck 798 CCCTTTAAAGTATCTGAAGGAAAAA---GGCTGGGCGCCGACAATTGAAG 844
BSNT_00608___ 845 CAGGAGATATCGAGCTGCTTGCCAAAGGGAAGCCTGATTTTGTAGGTGTC 894
..||.|||||.|||||..|.||.|||||.||.||.||||||||.|||||.
BL01718___yck 845 ATGGGGATATGGAGCTTTTAGCAAAAGGAAAACCCGATTTTGTCGGTGTG 894
BSNT_00608___ 895 AATTATTATCAGACGATCACCTATGAACGAAATCCGCTTGATGGTGTGTC 944
|||||||||||.||.|||||.||||||...|||||.|||||.||.||.||
BL01718___yck 895 AATTATTATCAAACCATCACATATGAAATGAATCCTCTTGACGGGGTATC 944
BSNT_00608___ 945 AGAAGGGAAAATGAATACGACAGGCCAAAAGGGAACCAATCAGGAGACGG 994
.|||||.||.|||||||||||.|||||||||||||.|||||||||.||.|
BL01718___yck 945 GGAAGGAAAGATGAATACGACCGGCCAAAAGGGAAGCAATCAGGAAACAG 994
BSNT_00608___ 995 GGATACCCGGAGTGTTCAAAACGAAAAAAAATCCGCATCT---GACAACA 1041
|.||.||.||..|.|.||||||.||||..||.||.||||| ||||.|
BL01718___yck 995 GCATGCCGGGTTTATACAAAACAAAAAGGAACCCTCATCTTGAGACATC- 1043
BSNT_00608___ 1042 AGCAACTGGGATTGGACAATTGACGCAATTGGGCTGCGTATCGGTCTTCG 1091
.||.|||||||||.|.||||||.|.||.||.||..|.|||||.|||||
BL01718___yck 1044 --GAATTGGGATTGGGCCATTGACCCGATCGGTCTAAGAATCGGACTTCG 1091
BSNT_00608___ 1092 CCGAATTACAAGCCGCTATCAGCTTCCAGTGTTTATAACAGAGAACGGTT 1141
|.|.|||.|.|||||||||..||||||..|.||.|||||.||.|||||..
BL01718___yck 1092 CAGGATTTCCAGCCGCTATGGGCTTCCGCTTTTCATAACGGAAAACGGGC 1141
BSNT_00608___ 1142 TGGGTGAATTTGATAAAGTTG---AGGACGGCACTGTACAGGATGATTAT 1188
||||.|||||.|||||.|||| |.||||||||..|.||.|||||.||.
BL01718___yck 1142 TGGGGGAATTCGATAAGGTTGAAAATGACGGCACGATTCATGATGACTAC 1191
BSNT_00608___ 1189 CGAATTGATTATTTACGTTCGCATCTTGAGCAATGCAGACAAGCCATCAG 1238
.||||||..||.||.|||.||||.|||||.|||||||||||.||..|.|.
BL01718___yck 1192 AGAATTGCCTACTTGCGTGCGCACCTTGAACAATGCAGACAGGCTTTAAA 1241
BSNT_00608___ 1239 TGACGGTGTTGATTTAATCGGCTATTGCAGCTGGTCGTTTACTGATCTGT 1288
.|||||.||.||||||||||||||.|||||||||||.|||||.|||.|.|
BL01718___yck 1242 CGACGGAGTCGATTTAATCGGCTACTGCAGCTGGTCATTTACAGATTTAT 1291
BSNT_00608___ 1289 TAAGCTGGCTGAACGGCTACCAAAAAAGATACGGATTTGTATATGTCAAT 1338
|.||||||||||||||||||||.|||||||||||.||.||.|||.|.||.
BL01718___yck 1292 TGAGCTGGCTGAACGGCTACCAGAAAAGATACGGTTTCGTTTATATTAAC 1341
BSNT_00608___ 1339 CGTGATGAAGAAAGCACATACGATTTAAAACGCTTGAAG------AAAAA 1382
|||||||||||.| ||.||||...||||||| |||||
BL01718___yck 1342 CGTGATGAAGAGA---------ATGTAAAGGACTTGAAGAGAATTAAAAA 1382
BSNT_00608___ 1383 A---AGCTTTTATTGGTATCAAGATGTCATCAAGACGAACGGAGAA-AG- 1427
| ||||||||.|||||.|||.|.|||||..||||.|||||.||| ||
BL01718___yck 1383 AGACAGCTTTTACTGGTACCAAAACGTCATTCAGACAAACGGGGAAGAGC 1432
BSNT_00608___ 1428 TTTATAA 1434
||||.
BL01718___yck 1433 TTTAG-- 1437
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