Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00570 and BL01711
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence dna-align/BSNT_00570___ycgO.1.5803.seq
# -bsequence dna-align/BL01711___ycgO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00570___ycgO-BL01711___ycgO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00570___ycgO-BL01711___ycgO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00570___ycgO
# 2: BL01711___ycgO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1466
# Identity: 998/1466 (68.1%)
# Similarity: 998/1466 (68.1%)
# Gaps: 157/1466 (10.7%)
# Score: 3483.5
#
#
#=======================================
BSNT_00570___ 0 -------------------------------------------------- 0
BL01711___ycg 1 ATGGTAGGGATGCTTTATATTGGGTATTACGCTTACAAACGGACAGCAAA 50
BSNT_00570___ 1 --------------------------------TTGGGTCCGGCAGTAACC 18
|.||| ||.||.||.||.
BL01711___ycg 51 CCTCTCAGACTATATGCTTGGCGGACGAACGCTCGGG-CCTGCTGTCACG 99
BSNT_00570___ 19 GCTCTCAGTGCCGGCGCTGCCGATATGAGCGGCTGGCTGCTGATGGGGCT 68
||.|||||.||||||||..|.||.||||||||||||||..||||||||||
BL01711___ycg 100 GCGCTCAGCGCCGGCGCATCAGACATGAGCGGCTGGCTTTTGATGGGGCT 149
BSNT_00570___ 69 TCCGGGCGCCATGTTTTCTACTGGTCTGAGCGGCGCTTGGATCGTCATCG 118
.|||||||||||||||.|.||.||.||||||||..|.|||||.|||||||
BL01711___ycg 150 GCCGGGCGCCATGTTTGCAACAGGCCTGAGCGGTTCGTGGATTGTCATCG 199
BSNT_00570___ 119 GACTTTGCCTTGGAGCGTGGGCGAACTGGCTTTACGTCGCACCGCGGCTG 168
||||....||.||.||.||||||||||||.|.|..||.||.|||||.||.
BL01711___ycg 200 GACTCGTACTCGGCGCTTGGGCGAACTGGATATTTGTAGCGCCGCGTCTA 249
BSNT_00570___ 169 AGAACCTATACTGAAAAAGCGGGGAATTCCATTACAATTCCCGGATTCCT 218
||..|.||.||.|||..||||||.|||||.||.||.||.||.|.|||..|
BL01711___ycg 250 AGGTCATACACCGAAGTAGCGGGCAATTCAATCACTATCCCTGCATTTTT 299
BSNT_00570___ 219 GGAAAATCGCTTCGGAGATCAAA-CAAAGCTTCTCAGACTGTTTTCAGGA 267
.|||||.||.||....|| |||| |||||.|.||..||.|.|||||.|||
BL01711___ycg 300 AGAAAACCGTTTTCATGA-CAAATCAAAGATCCTGCGAATATTTTCCGGA 348
BSNT_00570___ 268 ATTGTCATT-TTAGTCTTTTTCACGTTTTATGTATCGTCCGGAATGGTGT 316
.|.|||||| ||| .||||||.||||||||||||||.||.||||||||.|
BL01711___ycg 349 GTCGTCATTATTA-CCTTTTTTACGTTTTATGTATCATCTGGAATGGTTT 397
BSNT_00570___ 317 CCGGCGGCGTCTTATTCAACAGCATCTTGGGGATGGATTATCACACCGGC 366
||||.|||||.|||||.||||||||.||.....|||||||.||..|.||.
BL01711___ycg 398 CCGGGGGCGTTTTATTTAACAGCATATTTAATTTGGATTACCATGCAGGG 447
BSNT_00570___ 367 CTGTGGATTGTGACGGGTGTTGTTGTGGCATACACCCTGTTTGGCGGCTT 416
||||||||..|..|.||.|||||.|||||.|||||.||.||.|||||.||
BL01711___ycg 448 CTGTGGATCATTTCAGGCGTTGTCGTGGCCTACACGCTTTTCGGCGGGTT 497
BSNT_00570___ 417 TTTGGCAGTCAGCTGGACAGATTTTGTTCAGGGGATCATTATGTTTGCCG 466
||||||||||||||||||.||.|||||.||.||.|||||||||||||.||
BL01711___ycg 498 TTTGGCAGTCAGCTGGACGGACTTTGTCCAAGGCATCATTATGTTTGTCG 547
BSNT_00570___ 467 CACTCATTCTTGTGCCGATCGTTACGTTTTTCCACACGGGAGGAGCAGGT 516
|..|.||||||||.|||||.||.|||.|..|.||.|||||||||.|.||.
BL01711___ycg 548 CGTTAATTCTTGTTCCGATTGTGACGGTCATTCAGACGGGAGGACCTGGA 597
BSNT_00570___ 517 GA----TACAGTTGCTGAAAT----TCGCTCTGTAGATCCTGATATGTTT 558
|| |.||| .||.|| |||.|| |||||..|..|..|.
BL01711___ycg 598 GAAGCCTTCAG----CGAGATCCAGTCGATC----GATCCAAACCTCCTC 639
BSNT_00570___ 559 AACATTTTCAAAGGAACGAGCGTCCTTGGCATTATTTCTTTGTTTGCCTG 608
||.|||||.|||||.|||||||||||.|||||.||.||.|||||..|.||
BL01711___ycg 640 AATATTTTTAAAGGTACGAGCGTCCTCGGCATCATCTCCTTGTTCTCATG 689
BSNT_00570___ 609 GGGGCTGGGATACTTTGGCCAGCCGCATATTATTGTGCGTTTTATGGCGA 658
|||.||.||.||.|||||.|||||.||||||||.|||||.||||||||||
BL01711___ycg 690 GGGCCTCGGCTATTTTGGACAGCCTCATATTATCGTGCGCTTTATGGCGA 739
BSNT_00570___ 659 TCACGTCTGTCAAAGAGATCAAAAGAGCGCGCAGAATCGGGATGGGCTGG 708
|..|.||..||||.||.|..||.|.|||||||.|.|||||.|||||.|||
BL01711___ycg 740 TATCCTCCATCAAGGAAACGAAGAAAGCGCGCCGGATCGGCATGGGTTGG 789
BSNT_00570___ 709 ATGATTTTGTC---TGCAGTAGGCGCAGTGCTGACCGGTTTGGGCGGAAT 755
|||||.||.|| ||| .||||||.||||||||||.|||..|||.||
BL01711___ycg 790 ATGATCTTTTCAAGTGC---GGGCGCACTGCTGACCGGATTGCTCGGTAT 836
BSNT_00570___ 756 CGCTTATTACCATC----AGCGCGGCATGACAC-TGAAGGACCCAGAGAC 800
.||.|||||| || |.|| |||.| ||| ||.|.||.||.|||||
BL01711___ycg 837 TGCGTATTAC--TCGAAGAACG-GGCTT--CACTTGGATGATCCGGAGAC 881
BSNT_00570___ 801 GATTTTTATTCAATTAGGGAATATCTTGTTCCATCCGATTATCACGGGTT 850
.||.||.||||||||.||.||.|||.||||.||.||..|.|||||.||.|
BL01711___ycg 882 CATCTTCATTCAATTGGGTAACATCCTGTTTCACCCTCTAATCACAGGAT 931
BSNT_00570___ 851 TTCTGATTTCAGCGATTTTGGCCGCGATTATGAGTACAATTTCTTCCCAG 900
||.|.||.||.|||||||||||.|||.||||||||||||||||.||||||
BL01711___ycg 932 TTTTAATCTCGGCGATTTTGGCAGCGGTTATGAGTACAATTTCCTCCCAG 981
BSNT_00570___ 901 CTGCTTGTGACATCAAGCTCTCTGGTAGAAGATTTGTATAAGTCGATGTT 950
|||||||||||||||||.|||||....||||||||.||.||..|..|.||
BL01711___ycg 982 CTGCTTGTGACATCAAGTTCTCTAACTGAAGATTTATACAAAACACTATT 1031
BSNT_00570___ 951 CAGACGCTCAGCTTCAGATAAAGAACTGGTGTTTTTAGGCCGACTGGCTG 1000
.|..|||||.||.||.|||||||||||.||.|||||.||.||.||..|.|
BL01711___ycg 1032 TAAGCGCTCTGCATCTGATAAAGAACTCGTCTTTTTCGGACGGCTTTCGG 1081
BSNT_00570___ 1001 TTCTGGCTGTTTCAATTGTCG--CGTTGGTTATGGCTTGGGAGAAAAATA 1048
||.||||.|||||.||||||| |..|| |.|.||.|||...|||||.|
BL01711___ycg 1082 TTTTGGCGGTTTCCATTGTCGGACTCTG--TCTCGCCTGGACAAAAAACA 1129
BSNT_00570___ 1049 ACACCATCCTTGGATTGGTCAGCTACGCGTGGGCGGGCTTCGGTGCATCA 1098
|.||.||.||.||..|.||||||||.||.||||||||.|||||.||.||.
BL01711___ycg 1130 ATACGATTCTCGGTCTTGTCAGCTATGCTTGGGCGGGTTTCGGAGCGTCG 1179
BSNT_00570___ 1099 TTCGGGCCGGTTGTACTGCTCAGTCTGTTTTGGAAACGAATGACCAAATG 1148
|||||.||.||.||..|..|.|||.||||||||||..|.|||||.|||||
BL01711___ycg 1180 TTCGGCCCCGTGGTCATCTTAAGTTTGTTTTGGAAGAGGATGACAAAATG 1229
BSNT_00570___ 1149 GGGGGCACTCGCCGGCATGATTGTGGGAGCAGC-GACTGTAATCATTTGG 1197
||||||.||.|||||.|||.|||..||||| || .||.||.|||||||||
BL01711___ycg 1230 GGGGGCGCTTGCCGGAATGGTTGCCGGAGC-GCTTACCGTCATCATTTGG 1278
BSNT_00570___ 1198 GCGAATGCCGGTCTTTCGGACTTTCTGTATGAAATGATACCTGGTTTTGC 1247
|||.|.|||||.|||||.||..||||.|||||||||||.||.||.|||||
BL01711___ycg 1279 GCGGAAGCCGGGCTTTCCGATGTTCTTTATGAAATGATTCCGGGCTTTGC 1328
BSNT_00570___ 1248 TGCGAGTCTATTATCTGTCTTTTTTGTCAGCATATTGACGCAGGCTCCGT 1297
.||.||..|..|.|.|||.|||.|.|||||..|||||| |||
BL01711___ycg 1329 CGCCAGCTTGCTGTTTGTGTTTGTCGTCAGTCTATTGA---------CGT 1369
BSNT_00570___ 1298 CACAAGCTGTCACAG-ACCAG------------TTCAACGACTACCAAGA 1334
||.||.|.| || |.||| |||.|..|.|||.||.|
BL01711___ycg 1370 CAAAACCGG----AGCAGCAGGTGCTTGATGAATTCGAGCAATACAAACA 1415
BSNT_00570___ 1335 TACAATGTCACAATAA 1350
.||..|||.|
BL01711___ycg 1416 AACGCTGTAA------ 1425
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