Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00570 and BL01711

See Amino acid alignment / Visit BSNT_00570 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence dna-align/BSNT_00570___ycgO.1.5803.seq
#    -bsequence dna-align/BL01711___ycgO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00570___ycgO-BL01711___ycgO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00570___ycgO-BL01711___ycgO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00570___ycgO
# 2: BL01711___ycgO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1466
# Identity:     998/1466 (68.1%)
# Similarity:   998/1466 (68.1%)
# Gaps:         157/1466 (10.7%)
# Score: 3483.5
# 
#
#=======================================

BSNT_00570___      0 --------------------------------------------------      0
                                                                       
BL01711___ycg      1 ATGGTAGGGATGCTTTATATTGGGTATTACGCTTACAAACGGACAGCAAA     50

BSNT_00570___      1 --------------------------------TTGGGTCCGGCAGTAACC     18
                                                     |.||| ||.||.||.||.
BL01711___ycg     51 CCTCTCAGACTATATGCTTGGCGGACGAACGCTCGGG-CCTGCTGTCACG     99

BSNT_00570___     19 GCTCTCAGTGCCGGCGCTGCCGATATGAGCGGCTGGCTGCTGATGGGGCT     68
                     ||.|||||.||||||||..|.||.||||||||||||||..||||||||||
BL01711___ycg    100 GCGCTCAGCGCCGGCGCATCAGACATGAGCGGCTGGCTTTTGATGGGGCT    149

BSNT_00570___     69 TCCGGGCGCCATGTTTTCTACTGGTCTGAGCGGCGCTTGGATCGTCATCG    118
                     .|||||||||||||||.|.||.||.||||||||..|.|||||.|||||||
BL01711___ycg    150 GCCGGGCGCCATGTTTGCAACAGGCCTGAGCGGTTCGTGGATTGTCATCG    199

BSNT_00570___    119 GACTTTGCCTTGGAGCGTGGGCGAACTGGCTTTACGTCGCACCGCGGCTG    168
                     ||||....||.||.||.||||||||||||.|.|..||.||.|||||.||.
BL01711___ycg    200 GACTCGTACTCGGCGCTTGGGCGAACTGGATATTTGTAGCGCCGCGTCTA    249

BSNT_00570___    169 AGAACCTATACTGAAAAAGCGGGGAATTCCATTACAATTCCCGGATTCCT    218
                     ||..|.||.||.|||..||||||.|||||.||.||.||.||.|.|||..|
BL01711___ycg    250 AGGTCATACACCGAAGTAGCGGGCAATTCAATCACTATCCCTGCATTTTT    299

BSNT_00570___    219 GGAAAATCGCTTCGGAGATCAAA-CAAAGCTTCTCAGACTGTTTTCAGGA    267
                     .|||||.||.||....|| |||| |||||.|.||..||.|.|||||.|||
BL01711___ycg    300 AGAAAACCGTTTTCATGA-CAAATCAAAGATCCTGCGAATATTTTCCGGA    348

BSNT_00570___    268 ATTGTCATT-TTAGTCTTTTTCACGTTTTATGTATCGTCCGGAATGGTGT    316
                     .|.|||||| ||| .||||||.||||||||||||||.||.||||||||.|
BL01711___ycg    349 GTCGTCATTATTA-CCTTTTTTACGTTTTATGTATCATCTGGAATGGTTT    397

BSNT_00570___    317 CCGGCGGCGTCTTATTCAACAGCATCTTGGGGATGGATTATCACACCGGC    366
                     ||||.|||||.|||||.||||||||.||.....|||||||.||..|.||.
BL01711___ycg    398 CCGGGGGCGTTTTATTTAACAGCATATTTAATTTGGATTACCATGCAGGG    447

BSNT_00570___    367 CTGTGGATTGTGACGGGTGTTGTTGTGGCATACACCCTGTTTGGCGGCTT    416
                     ||||||||..|..|.||.|||||.|||||.|||||.||.||.|||||.||
BL01711___ycg    448 CTGTGGATCATTTCAGGCGTTGTCGTGGCCTACACGCTTTTCGGCGGGTT    497

BSNT_00570___    417 TTTGGCAGTCAGCTGGACAGATTTTGTTCAGGGGATCATTATGTTTGCCG    466
                     ||||||||||||||||||.||.|||||.||.||.|||||||||||||.||
BL01711___ycg    498 TTTGGCAGTCAGCTGGACGGACTTTGTCCAAGGCATCATTATGTTTGTCG    547

BSNT_00570___    467 CACTCATTCTTGTGCCGATCGTTACGTTTTTCCACACGGGAGGAGCAGGT    516
                     |..|.||||||||.|||||.||.|||.|..|.||.|||||||||.|.||.
BL01711___ycg    548 CGTTAATTCTTGTTCCGATTGTGACGGTCATTCAGACGGGAGGACCTGGA    597

BSNT_00570___    517 GA----TACAGTTGCTGAAAT----TCGCTCTGTAGATCCTGATATGTTT    558
                     ||    |.|||    .||.||    |||.||    |||||..|..|..|.
BL01711___ycg    598 GAAGCCTTCAG----CGAGATCCAGTCGATC----GATCCAAACCTCCTC    639

BSNT_00570___    559 AACATTTTCAAAGGAACGAGCGTCCTTGGCATTATTTCTTTGTTTGCCTG    608
                     ||.|||||.|||||.|||||||||||.|||||.||.||.|||||..|.||
BL01711___ycg    640 AATATTTTTAAAGGTACGAGCGTCCTCGGCATCATCTCCTTGTTCTCATG    689

BSNT_00570___    609 GGGGCTGGGATACTTTGGCCAGCCGCATATTATTGTGCGTTTTATGGCGA    658
                     |||.||.||.||.|||||.|||||.||||||||.|||||.||||||||||
BL01711___ycg    690 GGGCCTCGGCTATTTTGGACAGCCTCATATTATCGTGCGCTTTATGGCGA    739

BSNT_00570___    659 TCACGTCTGTCAAAGAGATCAAAAGAGCGCGCAGAATCGGGATGGGCTGG    708
                     |..|.||..||||.||.|..||.|.|||||||.|.|||||.|||||.|||
BL01711___ycg    740 TATCCTCCATCAAGGAAACGAAGAAAGCGCGCCGGATCGGCATGGGTTGG    789

BSNT_00570___    709 ATGATTTTGTC---TGCAGTAGGCGCAGTGCTGACCGGTTTGGGCGGAAT    755
                     |||||.||.||   |||   .||||||.||||||||||.|||..|||.||
BL01711___ycg    790 ATGATCTTTTCAAGTGC---GGGCGCACTGCTGACCGGATTGCTCGGTAT    836

BSNT_00570___    756 CGCTTATTACCATC----AGCGCGGCATGACAC-TGAAGGACCCAGAGAC    800
                     .||.||||||  ||    |.|| |||.|  ||| ||.|.||.||.|||||
BL01711___ycg    837 TGCGTATTAC--TCGAAGAACG-GGCTT--CACTTGGATGATCCGGAGAC    881

BSNT_00570___    801 GATTTTTATTCAATTAGGGAATATCTTGTTCCATCCGATTATCACGGGTT    850
                     .||.||.||||||||.||.||.|||.||||.||.||..|.|||||.||.|
BL01711___ycg    882 CATCTTCATTCAATTGGGTAACATCCTGTTTCACCCTCTAATCACAGGAT    931

BSNT_00570___    851 TTCTGATTTCAGCGATTTTGGCCGCGATTATGAGTACAATTTCTTCCCAG    900
                     ||.|.||.||.|||||||||||.|||.||||||||||||||||.||||||
BL01711___ycg    932 TTTTAATCTCGGCGATTTTGGCAGCGGTTATGAGTACAATTTCCTCCCAG    981

BSNT_00570___    901 CTGCTTGTGACATCAAGCTCTCTGGTAGAAGATTTGTATAAGTCGATGTT    950
                     |||||||||||||||||.|||||....||||||||.||.||..|..|.||
BL01711___ycg    982 CTGCTTGTGACATCAAGTTCTCTAACTGAAGATTTATACAAAACACTATT   1031

BSNT_00570___    951 CAGACGCTCAGCTTCAGATAAAGAACTGGTGTTTTTAGGCCGACTGGCTG   1000
                     .|..|||||.||.||.|||||||||||.||.|||||.||.||.||..|.|
BL01711___ycg   1032 TAAGCGCTCTGCATCTGATAAAGAACTCGTCTTTTTCGGACGGCTTTCGG   1081

BSNT_00570___   1001 TTCTGGCTGTTTCAATTGTCG--CGTTGGTTATGGCTTGGGAGAAAAATA   1048
                     ||.||||.|||||.|||||||  |..||  |.|.||.|||...|||||.|
BL01711___ycg   1082 TTTTGGCGGTTTCCATTGTCGGACTCTG--TCTCGCCTGGACAAAAAACA   1129

BSNT_00570___   1049 ACACCATCCTTGGATTGGTCAGCTACGCGTGGGCGGGCTTCGGTGCATCA   1098
                     |.||.||.||.||..|.||||||||.||.||||||||.|||||.||.||.
BL01711___ycg   1130 ATACGATTCTCGGTCTTGTCAGCTATGCTTGGGCGGGTTTCGGAGCGTCG   1179

BSNT_00570___   1099 TTCGGGCCGGTTGTACTGCTCAGTCTGTTTTGGAAACGAATGACCAAATG   1148
                     |||||.||.||.||..|..|.|||.||||||||||..|.|||||.|||||
BL01711___ycg   1180 TTCGGCCCCGTGGTCATCTTAAGTTTGTTTTGGAAGAGGATGACAAAATG   1229

BSNT_00570___   1149 GGGGGCACTCGCCGGCATGATTGTGGGAGCAGC-GACTGTAATCATTTGG   1197
                     ||||||.||.|||||.|||.|||..||||| || .||.||.|||||||||
BL01711___ycg   1230 GGGGGCGCTTGCCGGAATGGTTGCCGGAGC-GCTTACCGTCATCATTTGG   1278

BSNT_00570___   1198 GCGAATGCCGGTCTTTCGGACTTTCTGTATGAAATGATACCTGGTTTTGC   1247
                     |||.|.|||||.|||||.||..||||.|||||||||||.||.||.|||||
BL01711___ycg   1279 GCGGAAGCCGGGCTTTCCGATGTTCTTTATGAAATGATTCCGGGCTTTGC   1328

BSNT_00570___   1248 TGCGAGTCTATTATCTGTCTTTTTTGTCAGCATATTGACGCAGGCTCCGT   1297
                     .||.||..|..|.|.|||.|||.|.|||||..||||||         |||
BL01711___ycg   1329 CGCCAGCTTGCTGTTTGTGTTTGTCGTCAGTCTATTGA---------CGT   1369

BSNT_00570___   1298 CACAAGCTGTCACAG-ACCAG------------TTCAACGACTACCAAGA   1334
                     ||.||.|.|    || |.|||            |||.|..|.|||.||.|
BL01711___ycg   1370 CAAAACCGG----AGCAGCAGGTGCTTGATGAATTCGAGCAATACAAACA   1415

BSNT_00570___   1335 TACAATGTCACAATAA   1350
                     .||..|||.|      
BL01711___ycg   1416 AACGCTGTAA------   1425


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