Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00558 and BL01707

See Amino acid alignment / Visit BSNT_00558 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence dna-align/BSNT_00558___aroK.1.5803.seq
#    -bsequence dna-align/BL01707___aroK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00558___aroK-BL01707___aroK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00558___aroK-BL01707___aroK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00558___aroK
# 2: BL01707___aroK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 578
# Identity:     403/578 (69.7%)
# Similarity:   403/578 (69.7%)
# Gaps:          61/578 (10.6%)
# Score: 1335.5
# 
#
#=======================================

BSNT_00558___      1 ATGAACGCTAAACGAGCCATCCCAGTAAGAGA-AAGAAATATCGTCCTGA     49
                     |||||.||            |.||.||||||| ||| |||||.||.||||
BL01707___aro      1 ATGAATGC------------CGCAATAAGAGATAAG-AATATTGTGCTGA     37

BSNT_00558___     50 TCGGATTCATGGGTGTAGGAAAAACAACAATCGGCCAATTGGTCGCTAAA     99
                     ||||.||.|||||.||.|||||||||||.||||||||..|.||..|.||.
BL01707___aro     38 TCGGGTTTATGGGCGTCGGAAAAACAACCATCGGCCAGCTTGTGTCAAAG     87

BSNT_00558___    100 AAATTATATAGAGATTTTATTGATATTGACCAGCAGATCGAAAAGGA-TT    148
                     ||||||....|.||.|||||.|||||.|||||..||||||||||.|| ||
BL01707___aro     88 AAATTAGGCCGTGACTTTATCGATATCGACCACGAGATCGAAAAAGACTT    137

BSNT_00558___    149 TCAATATGTCAATTCCTGAGATATTTGAG-AAAAAGGGAGAAGACTTTTT    197
                     |||| |||.|.|||||.|||||.|||.|| |||||||| ||||..|||||
BL01707___aro    138 TCAA-ATGACCATTCCGGAGATGTTTCAGCAAAAAGGG-GAAGCGTTTTT    185

BSNT_00558___    198 CCGGAAAACGGAGAAGGAATATATTTTAGACATCTGCCATCATAAACGAT    247
                     |.|..|.|||||.||.|||||||||||..|.||.|||.|.|||  ||.||
BL01707___aro    186 CAGACAGACGGAAAAAGAATATATTTTTCAGATGTGCGAACAT--ACAAT    233

BSNT_00558___    248 --TCAAAATCGTATCTCT----GGGCGGGGGATCTTTTAAACAAGAAGAA    291
                       .|||.|||||||| ||    ||||||.|   |||||.|.||.||.|||
BL01707___aro    234 GGGCAACATCGTATC-CTTAGGGGGCGGCG---CTTTTCAGCAGGAGGAA    279

BSNT_00558___    292 ATCAGAAATTGCTGTCTGGAAAACTG---TCTCGTGCTTCATCTGGACCT    338
                     ||||||||....||.||.|||.||||   |.||.| |||  |||.||..|
BL01707___aro    280 ATCAGAAAGAAGTGCCTCGAACACTGCTTTGTCAT-CTT--TCTTGATTT    326

BSNT_00558___    339 GTCATGGGAGAACTGGAAGCAGCGCGCGGATTTATTGATCGAAAGCCGCC    388
                     ...|||||||||.|||||||||||...||||.|.|||||.||||.|.|.|
BL01707___aro    327 AAGATGGGAGAATTGGAAGCAGCGGATGGATCTCTTGATTGAAAACAGGC    376

BSNT_00558___    389 CTGTACTGCATAACCGTTCAATGGATGAAATGGAACAGCTGTTTAACGAA    438
                     |.||.||.||||||||..||||.||.||||||.||||||||||.||.|||
BL01707___aro    377 CGGTTCTTCATAACCGCACAATTGAAGAAATGAAACAGCTGTTCAATGAA    426

BSNT_00558___    439 AGAAA-AGTCATTTATGACA-AGCACAATTCAAAAGTGGCAACAGACAAC    486
                     ||||| || |||||||| || ..|||.|||.||||||||.|||.||.|||
BL01707___aro    427 AGAAAGAG-CATTTATG-CATTTCACCATTTAAAAGTGGAAACCGATAAC    474

BSNT_00558___    487 CTTTCCCCGGAAGAGGTTGCCGATTACATTGTTGAGACATTAAAAATTGG    536
                     |..||..|.|||||....|||||.||.|||||.||||...||||     |
BL01707___aro    475 CGGTCTGCCGAAGAAACGGCCGACTATATTGTGGAGATGCTAAA-----G    519

BSNT_00558___    537 CTGGG---ATCTTTATCAGCCGATGTAA    561
                     ||.||   |||||.|             
BL01707___aro    520 CTTGGTCAATCTTAA-------------    534


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