Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00555 and BL01706

See Amino acid alignment / Visit BSNT_00555 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence dna-align/BSNT_00555___nadE.1.5803.seq
#    -bsequence dna-align/BL01706___nadE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00555___nadE-BL01706___nadE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00555___nadE-BL01706___nadE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00555___nadE
# 2: BL01706___nadE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 845
# Identity:     605/845 (71.6%)
# Similarity:   605/845 (71.6%)
# Gaps:          52/845 ( 6.2%)
# Score: 2076.0
# 
#
#=======================================

BSNT_00555___      1 ATGAGCATGCAGGAAAAGATTATGCGTGAGTTACATGTGAAGCCCTCAAT     50
                     ||||...|.||.|||||.||.||||..||..|..||||.|||||.||.||
BL01706___nad      1 ATGACTTTACAAGAAAAAATCATGCAGGAACTGAATGTAAAGCCTTCTAT     50

BSNT_00555___     51 TGATCCAAAGCAAGAAATTGAGGACCGAGTCAATTTTTTAAAACAATATG    100
                     .||.||.||.||.||||||||..|..|.|||..||||||||||...|||.
BL01706___nad     51 CGAACCGAAACAGGAAATTGAAAAAAGGGTCGGTTTTTTAAAAAGCTATT    100

BSNT_00555___    101 TAAAGAAAACTGGTGCTAAAGGCTTTGTATTGGGAATCAGCGGCGGCCAG    150
                     |.||.|||||.|||||.|||||||||||.||.||.||||||||.||.|||
BL01706___nad    101 TGAAAAAAACGGGTGCCAAAGGCTTTGTTTTAGGCATCAGCGGAGGACAG    150

BSNT_00555___    151 GATTCAACACTTGCGGGAAGACTCGCTCAGCTTGCGGTGGAGAGCATTCG    200
                     ||.||.|||.|.|||||.||.||.||.|||||.||.||.|| ||.|||  
BL01706___nad    151 GACTCCACATTGGCGGGCAGGCTGGCCCAGCTGGCTGTTGA-AGAATT--    197

BSNT_00555___    201 CGAGG-----AG-------GGCGGAGACGCTCAATTTATCGCTGTCCGTC    238
                      ||||     ||       |||||        |||||||.||.||||| |
BL01706___nad    198 -GAGGGAAGAAGGCATTCAGGCGG--------AATTTATTGCGGTCCG-C    237

BSNT_00555___    239 TT-CCGCATGGCACACAGCAGGATGAAGACGATGCCCAGCTTGCTTTGAA    287
                     || ||..|.||....||||||||||||||.||.||||||||.||..||||
BL01706___nad    238 TTGCCTTACGGTGTTCAGCAGGATGAAGATGACGCCCAGCTGGCGCTGAA    287

BSNT_00555___    288 GTTTATTAAGCCGGATAAATCATGGAAGTTTGATATTAAATCAACAGTCA    337
                     .|||||..|||||||.||.||.|.....|||||.|||...|||||.||..
BL01706___nad    288 ATTTATCCAGCCGGACAAGTCTTTTGCTTTTGACATTGCTTCAACTGTAG    337

BSNT_00555___    338 GCGCTTTTTCTGATCAGTATCAG-----CAGGAAACAGGCGATCAGCTGA    382
                     |..|.|||.|||.|||.||||||     ||.|..|.||||     |||..
BL01706___nad    338 GTTCATTTGCTGCTCAATATCAGTCAGTCACGGGAGAGGC-----GCTTG    382

BSNT_00555___    383 CTGACTTTAATAAAGGAAACGTAAAAGCAAGAACAAGAATGATCGCGCAA    432
                     |.||.|||.|.|||||.||.||||||||.|||....|.||||||.|.|||
BL01706___nad    383 CCGATTTTCACAAAGGCAATGTAAAAGCGAGAGTCCGGATGATCACCCAA    432

BSNT_00555___    433 TACGCGATCGGCGGCCAGGAAGGC--CTTCTTGTGTTAGGAACAGACCAT    480
                     ||.||||||||.||.||  ||..|  ||.||.||..|.||.|||||.|||
BL01706___nad    433 TATGCGATCGGAGGTCA--AAATCAGCTGCTGGTAATTGGGACAGATCAT    480

BSNT_00555___    481 GCTGCTGAAGCAGTGACTGGTTTCTTTACGAAGTACGGTGACGGCGGAGC    530
                     |||||.|||||.||.||.||.||.||||||||.|||||.|||||.||.||
BL01706___nad    481 GCTGCAGAAGCTGTTACCGGATTTTTTACGAAATACGGAGACGGGGGCGC    530

BSNT_00555___    531 AGACCTCCTGCCGCTGACAGGCTTGACGAAGCGCCAGGGAAGAACCCTGC    580
                     ||||||..|||||||.|||||..||||.|||||||||||.||||.|||||
BL01706___nad    531 AGACCTTTTGCCGCTTACAGGACTGACAAAGCGCCAGGGCAGAAGCCTGC    580

BSNT_00555___    581 TGAAAGAGCTGGGTGCACCGGAACG--CTTATACTTAAAAG-AGCCGACT    627
                     ||.||||||||||.||.|||||.||  .||||||   .||| ..|||||.
BL01706___nad    581 TGGAAGAGCTGGGAGCGCCGGAGCGGCTTTATAC---GAAGTCCCCGACC    627

BSNT_00555___    628 GCCGATCTGCTCGACGAAAAACCGCAGCAGTCGGATGAAACAGAGCTTGG    677
                     ||||||.||||.||.||||||||.|||||.||.||||||||||||||.||
BL01706___nad    628 GCCGATTTGCTTGATGAAAAACCTCAGCAATCCGATGAAACAGAGCTCGG    677

BSNT_00555___    678 CATTTCCTACGACGAGATTGACGATTATCTCGAAGGAAAAGAAGTAT-CA    726
                     |.|..|.||.||..|.||.|||||.||.||.||||||||||..||.| ||
BL01706___nad    678 CCTGACATATGATAACATCGACGACTACCTTGAAGGAAAAGCCGTCTCCA    727

BSNT_00555___    727 GCGAAAGTATCAGAAGCGCTGGAAAAACGCTACA--GCATGACTGAACAT    774
                     ||| |.||..||||.||..|.|||||||||||||  ||||  |.||.||.
BL01706___nad    728 GCG-AGGTGGCAGAGGCCATCGAAAAACGCTACAAGGCAT--CCGAGCAC    774

BSNT_00555___    775 AAACGCCAGGTTCCGGCGTCTATGTTTGATGACTGGTGGAAATAA    819
                     ||||||||.||.||.||.||.||||||||.|||||||||||||||
BL01706___nad    775 AAACGCCAAGTCCCTGCTTCAATGTTTGACGACTGGTGGAAATAA    819


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00555 and BL01706

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
