Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00520 and BL01700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00520___yceH.1.5803.seq
# -bsequence dna-align/BL01700___yceH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00520___yceH-BL01700___yceH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00520___yceH-BL01700___yceH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00520___yceH
# 2: BL01700___yceH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1117
# Identity: 866/1117 (77.5%)
# Similarity: 866/1117 (77.5%)
# Gaps: 47/1117 ( 4.2%)
# Score: 3329.0
#
#
#=======================================
BSNT_00520___ 1 ATGACAACAGAAAATCAAA-----ATCCGCTTGTTCTCGAT------AAA 39
|||.|||....||||.||| ||| .||.|| |||
BL01700___yce 1 ATGGCAAATCCAAATGAAACAAGCATC--------GTCAATATTAGCAAA 42
BSNT_00520___ 40 AATGAAGAGATTTCCCAG--CAAAAAGCTGACGATATCCGTCTTCAGCTC 87
.|.||||||| ||.|.| .|||||||.||.||.||||||....|.|||
BL01700___yce 43 GAGGAAGAGA--TCACGGTTGAAAAAGCGGAGGACATCCGTGCGAAACTC 90
BSNT_00520___ 88 CGTCAGGAACCAGAAGTG-AAGCGGCTTGCTCAACAAATTGACGTTAAAA 136
||.|||||.||.||.||| |||| .||.||.|.||||||||||||.||||
BL01700___yce 91 CGCCAGGAGCCGGATGTGCAAGC-TCTGGCCCGACAAATTGACGTGAAAA 139
BSNT_00520___ 137 ACCAAATGGAGCTGCTTGAGTACGGCAAGGAGCCGGCCGTTGAAATATCC 186
|||||.|||||||..|.||.|.|||.||||||||.||..|||||||||||
BL01700___yce 140 ACCAAGTGGAGCTTTTAGAATTCGGTAAGGAGCCCGCTCTTGAAATATCC 189
BSNT_00520___ 187 AAGTTCTCTGACCGCA-TCTTGGGGATGATGAAAAC-AACAAGTGTGACA 234
|||||||||||||||| |||| ...|||||||.||| ||| |||||||||
BL01700___yce 190 AAGTTCTCTGACCGCATTCTT-TCCATGATGAGAACGAAC-AGTGTGACA 237
BSNT_00520___ 235 GACTCCGGCACAATGCTGACTCAGCTTGGGAAAATCATGGACCGCTTTGA 284
||.||.|||.|.|||.||||.|||||.||.||||||||||||||||||||
BL01700___yce 238 GATTCAGGCGCGATGTTGACGCAGCTCGGAAAAATCATGGACCGCTTTGA 287
BSNT_00520___ 285 CAAAAATGATTTTGATGAGCCAAAGGGATTAATGGCGAAAATTTTCAAAC 334
|||.|||||.|||||.||.|.|||.||.||..|..|.|||.|.||.||.|
BL01700___yce 288 CAAGAATGACTTTGAAGAACAAAAAGGCTTGCTCTCTAAATTATTTAAGC 337
BSNT_00520___ 335 GCGGCGGCAGCATGATTGAAAAAATCTTTAAAAAGTATCAGACGCTTGGC 384
|||||..|||||||||.||.|||||.||||||||.|||||.|||||.|||
BL01700___yce 338 GCGGCAACAGCATGATCGAGAAAATATTTAAAAAATATCAAACGCTCGGC 387
BSNT_00520___ 385 GGAGAGATTGAAAAAATCCACGTTGAGATTTCAAAATACAAAGATGAGAT 434
||.||.||.|||||||||.|.||.||.|||||||||||.||||||||.||
BL01700___yce 388 GGTGAAATCGAAAAAATCAATGTCGAAATTTCAAAATATAAAGATGAAAT 437
BSNT_00520___ 435 GACGAAGACGAACTACACGCTCGATGAAATGTATGAAAACAATATCAAAT 484
|||.||..|||.|...|||||.||||||||||||||||.|||..|.||||
BL01700___yce 438 GACAAAATCGACCGTGACGCTTGATGAAATGTATGAAAGCAACCTTAAAT 487
BSNT_00520___ 485 ACTATATGGAGCTTGAAAAATACGTCGTTGCCGGGCAGATGAAACTGGAA 534
|||||.|||||||.||||||||||||||.|||||.|||||||||.|.|||
BL01700___yce 488 ACTATGTGGAGCTGGAAAAATACGTCGTAGCCGGCCAGATGAAAATAGAA 537
BSNT_00520___ 535 GAGATGCAGTCGATCCTTCCTTCATATGAGGAAAAAGCGGCAAGCGGAAA 584
||..|||||..|.||.|.||...||||||.|..||||||||.||||||||
BL01700___yce 538 GAATTGCAGCGGCTCATCCCCGAATATGAAGCGAAAGCGGCCAGCGGAAA 587
BSNT_00520___ 585 CCAGCTGGCGCAAATGCAGCTCGATACATTGCGCAACGGCATTCAGGCGC 634
||||.|||||||.|||.||||.|||||..|.||.|||||||||||.||||
BL01700___yce 588 CCAGATGGCGCAGATGGAGCTTGATACGCTTCGAAACGGCATTCAAGCGC 637
BSNT_00520___ 635 TTGAGGAACGGGTGTATGATCTGGACATGGCACGGATGGTGGCGCTTCAA 684
|.||.|||||||||||||||||.||.|||||.||||||||.||..|||||
BL01700___yce 638 TGGAAGAACGGGTGTATGATCTCGATATGGCGCGGATGGTCGCAATTCAA 687
BSNT_00520___ 685 ACCGCACCTCAAATCCGTCTCCTGCAGCGAGGAAATGCAAAGCTGATCGG 734
||.||.||.||||||||.||.||.|||||.||.||..|||||||||||||
BL01700___yce 688 ACGGCGCCGCAAATCCGCCTGCTCCAGCGCGGCAACACAAAGCTGATCGG 737
BSNT_00520___ 735 GAAAATCAACTCCGCGTTTATCATTACCATTCCGATTTTCAAAAACGGCA 784
.|||||||||||.||.||.||||||||.||||||||||||||||||||||
BL01700___yce 738 AAAAATCAACTCGGCATTCATCATTACGATTCCGATTTTCAAAAACGGCA 787
BSNT_00520___ 785 TTATTCAGGCTGTTACGGTGAAACGGCAAAAGCTTGTGGCTGATTCCATG 834
|.||.|||||.|||||.|..||.||.|||||.|||||.||.|||||.|||
BL01700___yce 788 TCATCCAGGCCGTTACCGCCAAGCGCCAAAAACTTGTCGCCGATTCAATG 837
BSNT_00520___ 835 AGCGAGCTTGACCGCCGGACAAACGAGATGCTGAAACGAAATGCTGAAAA 884
|||||.||.||||||||.||.|||||.||||||||.||.||.||.|||||
BL01700___yce 838 AGCGAACTCGACCGCCGCACCAACGAAATGCTGAAGCGCAACGCGGAAAA 887
BSNT_00520___ 885 CATCTCGAGCCAAAGT--GTTGAAATTGCCAGAATGGCCGGCAGACCGAG 932
.||.||.|||| ||| ||.|||||.|||||||||.||||.||||||||
BL01700___yce 888 TATTTCAAGCC--AGTCCGTCGAAATCGCCAGAATGTCCGGAAGACCGAG 935
BSNT_00520___ 933 CATAGATATTGAAACGATCGAATCGTCTTGGAACACGATTGTCAGCGGCA 982
|||.||||||||||||||||||...||||||||.||||||||||..||||
BL01700___yce 936 CATCGATATTGAAACGATCGAACAATCTTGGAATACGATTGTCAAAGGCA 985
BSNT_00520___ 983 TGCAGGAAACAAAACAAATCGAGGAAGAAAACAAACGCCTCCGCGAAGAC 1032
|||||||.||.||.||.||.||.||.||.|||||||||||.||||||||.
BL01700___yce 986 TGCAGGAGACGAAGCAGATTGAAGATGAGAACAAACGCCTGCGCGAAGAA 1035
BSNT_00520___ 1033 GGCGCGAGACG--AATTGCACAGCTTCAGGATAATATTAAAAAAGCAGCA 1080
||.||.|.||| .|||| .|.||||||||.|||||.||||||||.||.
BL01700___yce 1036 GGGGCAAAACGCATATTG--GAACTTCAGGACAATATGAAAAAAGCCGCT 1083
BSNT_00520___ 1081 TTGCAGCAA-----TAA 1092
|| || |||
BL01700___yce 1084 TT-----AAACGGTTAA 1095
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