Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_00515 and BL01696

See Amino acid alignment / Visit BSNT_00515 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence dna-align/BSNT_00515___yceE.1.5803.seq
#    -bsequence dna-align/BL01696___yceE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00515___yceE-BL01696___yceE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00515___yceE-BL01696___yceE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00515___yceE
# 2: BL01696___yceE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 581
# Identity:     460/581 (79.2%)
# Similarity:   460/581 (79.2%)
# Gaps:           4/581 ( 0.7%)
# Score: 1792.0
# 
#
#=======================================

BSNT_00515___      1 ATGGCCATTCAATTATCAAAAGGACAGCGCATTGATTTAACAAAAACAAA     50
                     |||||.|||||||||||.||||||||..|.||.||||||||.|||||.||
BL01696___yce      1 ATGGCGATTCAATTATCTAAAGGACAAAGGATCGATTTAACGAAAACGAA     50

BSNT_00515___     51 TCCGGGACTGACAAAAGCGGTGATCGGCTTAGGCTGGGATACAAACAAGT    100
                     .||.||..||||.||||||.|||||||.||||||||||||||||||||.|
BL01696___yce     51 CCCCGGTTTGACGAAAGCGCTGATCGGTTTAGGCTGGGATACAAACAAAT    100

BSNT_00515___    101 ACTCCGGCGGACACGATTTTGACCTGGATGCTTCGGCCTTTTTAGTTGAT    150
                     |..|||||||...||||||||||.||||.||.|||||.|||.|.||.|||
BL01696___yce    101 ATACCGGCGGCGCCGATTTTGACTTGGACGCGTCGGCTTTTCTTGTCGAT    150

BSNT_00515___    151 GCGCATGATAACTGCGTAAATGATCTCGATTTCGTCTTCTATAATAACCT    200
                     ..|.|.|||...|||.|.|||||||.|||.|||||.||.||.||.|||||
BL01696___yce    151 CAGAACGATCGATGCATCAATGATCACGACTTCGTTTTTTACAACAACCT    200

BSNT_00515___    201 TGAACATCCGAGCGGCGGTGTCATCCATACGGGTGACAACCGCACGGGTG    250
                     .||.|||||.|||||||..||.||.||||||||.||||||||.||.||.|
BL01696___yce    201 CGAGCATCCAAGCGGCGCCGTGATTCATACGGGCGACAACCGGACAGGAG    250

BSNT_00515___    251 AGGGCGACGGAGATGATGAGCAGATTATCGTTGATTTCTCAAAAATCCCT    300
                     |.||.||.||.|||||.|||||.||.|||||.|||||||||||||||||.
BL01696___yce    251 AAGGTGAAGGCGATGACGAGCAAATCATCGTCGATTTCTCAAAAATCCCC    300

BSNT_00515___    301 GCTCACATTGAGAAAATCGGCATCACAGTGACCATTCACGACGCTG-AAG    349
                     |||||..||||.||.|||||||||||.|||||.||||||||.||.| |||
BL01696___yce    301 GCTCATGTTGAAAAGATCGGCATCACGGTGACGATTCACGAGGCGGAAAG    350

BSNT_00515___    350 CACGCAGCCAAAACTTTGGACAAGTTTCCAATGCATTTGTCCGCGTTGTG    399
                     | ||||||||.||||||||||||||.||.|||||.||||||||..|.||.
BL01696___yce    351 C-CGCAGCCAGAACTTTGGACAAGTCTCAAATGCGTTTGTCCGGCTCGTA    399

BSNT_00515___    400 GATGAAGAAACGCA-GAATGAGCTTCTTCGCTTCGATTTGGGAGAAGACT    448
                     ||||||..|||..| ||| |||||.||||||||.||.||||||||.||.|
BL01696___yce    400 GATGAATCAACAAATGAA-GAGCTGCTTCGCTTTGACTTGGGAGAGGATT    448

BSNT_00515___    449 TCTCCATTGAAACAGCTGTTGTCGTTTGTGAGCTTTACAGACACGGCGGC    498
                     |.||.|||||.|||||.|||||.|||||.||..|.|||.|.|||||.||.
BL01696___yce    449 TTTCAATTGAGACAGCGGTTGTTGTTTGCGAATTGTACCGTCACGGAGGA    498

BSNT_00515___    499 GAGTGGAAATTCAATGCGATCGGCAGCGGATTTTCCGGCGGGCTGGCTGC    548
                     ||.||||||||||||||.|||||||||||.|||||||||||..||||..|
BL01696___yce    499 GATTGGAAATTCAATGCCATCGGCAGCGGGTTTTCCGGCGGATTGGCATC    548

BSNT_00515___    549 ATTGTGCCGGAATTACGGTTTGCAAGTGTAA    579
                     ..|.|||||.||.|||||..|||||||.||.
BL01696___yce    549 GCTTTGCCGCAACTACGGCCTGCAAGTCTAG    579


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.