Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00512 and BL01694
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence dna-align/BSNT_00512___yceC.1.5803.seq
# -bsequence dna-align/BL01694___yceC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00512___yceC-BL01694___yceC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00512___yceC-BL01694___yceC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00512___yceC
# 2: BL01694___yceC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 619
# Identity: 447/619 (72.2%)
# Similarity: 447/619 (72.2%)
# Gaps: 35/619 ( 5.7%)
# Score: 1527.0
#
#
#=======================================
BSNT_00512___ 1 GTGGCAATTTCTTTAGAAAAAGGTCAACGAATTGATTTAACAAAAGGAAA 50
.||||.|||||||||||.||||||||.||.||||||||||||||||||||
BL01694___yce 1 TTGGCTATTTCTTTAGAGAAAGGTCAGCGGATTGATTTAACAAAAGGAAA 50
BSNT_00512___ 51 AGCCGGTCTGTC-AAAATTGATGGTCGGTCTCGGCTGGGACCC---AGTG 96
|||.||.||.|| ||.||| .|.|||||||||||||||||.|| ||.|
BL01694___yce 51 AGCGGGGCTTTCGAAGATT-TTAGTCGGTCTCGGCTGGGATCCGGTAGCG 99
BSNT_00512___ 97 TCCTCAGGCGGAGGATTCTTCAGCAAACTGCTTGGCGGAGGCGGTCCGAA 146
|||..|.||||.||.||.||..|.||.|||.||||.|||||....|||||
BL01694___yce 100 TCCGGAAGCGGCGGTTTTTTTGGAAAGCTGTTTGGGGGAGGAACCCCGAA 149
BSNT_00512___ 147 TATCGACTGTGATGCTTCAGTGCTGATGCTGGAAAACGGAAAATTCACCG 196
|||.||.|||||.||.||.||||||||||||||||||||||.|.||||.|
BL01694___yce 150 TATTGATTGTGACGCATCCGTGCTGATGCTGGAAAACGGAAGAGTCACAG 199
BSNT_00512___ 197 AAAAGAAAAATCTGATTTATTTCGGCAACCTGAAAAGCCGCTGCGGCGGT 246
|.||.||.||..|.|||||||||||.|||.|||..|||.|.||||||.|.
BL01694___yce 200 AGAACAAGAACGTCATTTATTTCGGAAACTTGAGGAGCAGATGCGGCAGC 249
BSNT_00512___ 247 GTACAGCATACAGGCGACAACCTGACGGGTGACGG-TGCGGGCGATGACG 295
.|..|.|||||.||.||.||.|||||.||.||.|| .|| ||.|||||.|
BL01694___yce 250 ATCGAACATACCGGAGATAATCTGACAGGCGAAGGCAGC-GGAGATGATG 298
BSNT_00512___ 296 AGCAAATTATGATAGATTTAGATAAAGTGCCTGGAAACATCG-------A 338
|.|||||.||..|||||||..|.|||||.||| ||| |
BL01694___yce 299 AACAAATCATTGTAGATTTGCAAAAAGTTCCT-------TCGCATATTCA 341
BSNT_00512___ 339 TAAGCTTGTATTTGTAGTGAACATTTACGATTGTGTCAGAAGAAAACAAG 388
|||||||||.|||||.|||||.||.||||||||.||.|.|.|||..||..
BL01694___yce 342 TAAGCTTGTCTTTGTCGTGAATATATACGATTGCGTGAAACGAAGCCAGC 391
BSNT_00512___ 389 ATTTCGGCATGATTCAAAATGCGTTTATCCGCGTAGTTGATCAATCT-AA 437
|||||||.|||||..|||||||.|||||.|||.|.| ||||..| ||
BL01694___yce 392 ATTTCGGAATGATCGAAAATGCCTTTATACGCATCG----TCAACATGAA 437
BSNT_00512___ 438 TCA-CG-AG-GAAATGCTCAAGTACAATTTGAGAGACAATTACGCCGGCA 484
|.| || || ||.|||.|||||||||||.||.|.|||.||||..|.||..
BL01694___yce 438 TGATCGCAGTGAGATGGTCAAGTACAATCTGCGGGACGATTATTCTGGGC 487
BSNT_00512___ 485 GAACAAGCCTGATTACAGCAGAAATCTACCGCAGCGGCAGTGAGTGGAAG 534
|.||||||||||||.|.|..|||||.|||||...||||...||||||||.
BL01694___yce 488 GGACAAGCCTGATTGCGGGCGAAATTTACCGTGACGGCGCCGAGTGGAAA 537
BSNT_00512___ 535 TTTGCAGCGATTGGTGAAGGCATGAACGATACGAG-ATTA--GAAGATAT 581
||..|.||..|.||.|||||||..||||||||||| |||| ||| ||
BL01694___yce 538 TTCACCGCTGTCGGAGAAGGCACAAACGATACGAGCATTACGGAA---AT 584
BSNT_00512___ 582 TATCAGCCGATACGTATAA 600
..|.|..||.||||..|.|
BL01694___yce 585 CGTTAAACGCTACGCCTGA 603
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