Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05297 and BL01691
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:24
# Commandline: needle
# -asequence dna-align/BSNT_05297___yvcE.1.5803.seq
# -bsequence dna-align/BL01691___cwlO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05297___yvcE-BL01691___cwlO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05297___yvcE-BL01691___cwlO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05297___yvcE
# 2: BL01691___cwlO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1488
# Identity: 982/1488 (66.0%)
# Similarity: 982/1488 (66.0%)
# Gaps: 207/1488 (13.9%)
# Score: 3040.5
#
#
#=======================================
BSNT_05297___ 1 GTG-AGAAAGA-GTTTAATTACACTTGGTTTGGCTTCCGTCATCGGGACA 48
||| |||||.| ||||| |||..|||||||.||.||..|..||||.||
BL01691___cwl 1 GTGAAGAAAAAGGTTTA--TACTTTTGGTTTAGCGTCGATTCTCGGAAC- 47
BSNT_05297___ 49 AGC-AGTTTTTTGATCCCATTTACAAGTAAAACTGCATCGGCGGAAACAT 97
||| |||.|.||.|.|||.||||..|..||.||.||||||||.|||||||
BL01691___cwl 48 AGCTAGTCTATTTACCCCCTTTATGAACAACACGGCATCGGCAGAAACAT 97
BSNT_05297___ 98 TAGATGAAAAGAAACAA-AAAATCGAAAGC--AAGCAATCTGAGGTTGCT 144
.|.|..|.|||||| |||.|| ||| ||||..|||||.||...|
BL01691___cwl 98 ---CTCAGCAAAAACAAGAAATTC---AGCAAAAGCGTTCTGAAGTGAAT 141
BSNT_05297___ 145 TCCAGCATTGA-AGCGAAGGAAAAAGAATTAACCGAGCTTCAGGAAAATC 193
||..||||.|| ||| |||...||||||.|..||.||||.||.||..|.|
BL01691___cwl 142 TCAGGCATCGAGAGC-AAGCGGAAAGAAATCGCCAAGCTGCAAGACGAGC 190
BSNT_05297___ 194 AATCAAAGATTGA----AAAAGAACTGAAAGACATTAACGCT-------A 232
|...||||.|||| |||| |..|||| ||| |
BL01691___cwl 191 AGAAAAAGCTTGAAGGTAAAA----TCCAAGA-------GCTTGATAAAA 229
BSNT_05297___ 233 AGGCGCTTGATACAAGCAACAAGATCGAAGATAAAAAAGAAGAAAACGAT 282
|.||.|||||.|||||||||||.||||||||.|||.||.||||||||.|.
BL01691___cwl 230 AAGCACTTGAAACAAGCAACAAAATCGAAGACAAAGAAAAAGAAAACAAA 279
BSNT_05297___ 283 AAAACAAAAGAAGAAATCAAAAAACTAAAAAAAGAGATTAAAGAAACAGA 332
|||||.|||.|||||.|..||...||.||||||||.||.||||||||.||
BL01691___cwl 280 AAAACGAAAAAAGAAGTGGAAGCTCTGAAAAAAGAAATCAAAGAAACCGA 329
BSNT_05297___ 333 AGCACGCATCGAAAAACG--CAATGAAATCCTGAAAAAACGCGTTCGTTC 380
|..|||.||.|||.|.|| ||| ||.|..|.|||||.|||||.||...
BL01691___cwl 330 AAAACGGATTGAAGAGCGTTCAA--AAGTGATTAAAAATCGCGTGCGCAG 377
BSNT_05297___ 381 TTTACAGGAAAGCGGCGGATCTCAAGGATACATAGATGTTCTTCTAGGAT 430
..|.|||||||.|||||||||.|||...||..|..||||.|||||.||..
BL01691___cwl 378 CCTGCAGGAAAACGGCGGATCCCAAAACTATTTGAATGTCCTTCTGGGCG 427
BSNT_05297___ 431 CAACAAGCTTTGGTGACTTTATCTCTCGTGCGACTGCGGTTTCATCTATT 480
||..||||||.||.||.||||||.|||||||.|||||.||||||.|.|||
BL01691___cwl 428 CACAAAGCTTCGGAGATTTTATCACTCGTGCAACTGCTGTTTCAACAATT 477
BSNT_05297___ 481 GTGGACGCAGACAAAGATTTAATCAAACAGCAAGAGCAGGATAAAGCGAA 530
||.||.||.||||||||..|..|..|..||||.|||.|.||||||...||
BL01691___cwl 478 GTTGATGCGGACAAAGACCTGCTTGACGAGCAGGAGAAAGATAAAAACAA 527
BSNT_05297___ 531 GCTCGAAGATTCTGAAG------CGGATTTGAATGATAAGCTGAAAGAAG 574
|||.||| .||| |.|||||.|||...||.|||.|.|||.
BL01691___cwl 528 GCTTGAA------AAAGCAATGTCTGATTTAAATACAAAACTGGACGAAA 571
BSNT_05297___ 575 TTCAAGCTGCATTGGCTAAATTAGAAACAATGCAAAAA---GACCTTGAT 621
|.|||....||.|.||..|.|||.|||| ||..||| ||.||||||
BL01691___cwl 572 TCCAAAAAACACTAGCCGATTTAAAAAC---GCTTAAATCGGATCTTGAT 618
BSNT_05297___ 622 AAACAGCTTAATGAAAAAGACAAGCTTTTCGACGAAGC----AA--AAGC 665
||||||||.||.| ||.||.|||.|.||||.|.|.||| || ||||
BL01691___cwl 619 AAACAGCTGAAAG-AACAGGCAAACCTTTCTAAGCAGCTGCAAACGAAGC 667
BSNT_05297___ 666 AAGC--CAAAAGAA----AACGGCTAAAGCGATTTCTGAATTAAAATCAG 709
|||| ||..|||| |||.| ||||| ||||| |||| ||
BL01691___cwl 668 AAGCGGCAGCAGAATCAGAACTG----AGCGA--TCTGA---AAAA--AG 706
BSNT_05297___ 710 AGGCG-----TCTGAACTTGCAAATCAAAAAGCAAATACTGAAGC---TG 751
|.||| ||||| ||||..||.|||| .|| ||
BL01691___cwl 707 AAGCGGGCTCTCTGA-----CAAAAGAAGAAGC---------CGCTCTTG 742
BSNT_05297___ 752 AACAAGCACGCATCAAAAAAGAACAAGAAGCAGCGGCTGCTTTGATCAAA 801
||||| |.|| |.|||.|||||..||..||.||||||||
BL01691___cwl 743 AACAA--AAGC-TTAAAGAAGAAAGAGCTGCGGCGGCTGC---------- 779
BSNT_05297___ 802 AAGCAGGAAGAAGCACAAAAAGCATCTGATGAAACACAAACAGATGACAG 851
|||||.|| ||||..||.|||.|||||
BL01691___cwl 780 -AGCAGCAA-AAGCGAAAGAAGAATCTG---------------------- 805
BSNT_05297___ 852 CCAAACGGCTACAA---CTGAATCAG---CAAAAGCAAGCTCATCTGATG 895
..||||||..|| ||||.|||| |...|.|||||||| .
BL01691___cwl 806 --CGACGGCTGAAAAGTCTGATTCAGGATCTTCATCAAGCTCA------A 847
BSNT_05297___ 896 ATTC---TTCAGAC----AATTCTTCTAACGGTTCATCAAACAGC---TC 935
|||| |||||.| || |||.||||.||.||.|||||| ||
BL01691___cwl 848 ATTCAGGTTCAGTCAGCAAA----TCTGACGGATCGTCCAACAGCGGTTC 893
BSNT_05297___ 936 GTCTAACGGCTCATCTTCTAAGAAGAGCAGCGGC---TCAAACAGCAATT 982
.||.|.|.|| |||||.||||||.|| ||||..|.|.|.|
BL01691___cwl 894 TTCAAGCAGC---------AAGAAAAGCAGCAGCCCGTCAAGAAACTACT 934
BSNT_05297___ 983 CAGGCGGCACTGTTATCAGTAACTCTGG---CGGAATTGAAGGCGCGATC 1029
|...|||..|||||.|.||.|.|..||| ||..|||||||..||.|||
BL01691___cwl 935 CTTCCGGTTCTGTTGTAAGCAGCAATGGAAACGCGATTGAAGCTGCCATC 984
BSNT_05297___ 1030 AGCGTTGGTTCAAGCATTGTAGGACA-ATCTCCGTACAAGTTTGGCGGCG 1078
|||...||||||||||||||.|| || ||||||||||||.|..||.||||
BL01691___cwl 985 AGCACAGGTTCAAGCATTGTCGG-CAGATCTCCGTACAAATGGGGAGGCG 1033
BSNT_05297___ 1079 GACG--CAGTCAGTCTGATATCAACAACCGTATTTTTGACTGCTCATCAT 1126
|||| || ||..||||||||.|||||||....||.|||||||||||||
BL01691___cwl 1034 GACGTTCA--CAAGCTGATATCGACAACCGCCGCTTCGACTGCTCATCAT 1081
BSNT_05297___ 1127 TCGTACGCTGGGCATACGCTTCTGCAGGTGTTAACCTTGGACCTGTAGGC 1176
|||||||||||||.||.||.||.|||||.||..|.|||||| .|.||.
BL01691___cwl 1082 TCGTACGCTGGGCTTATGCATCAGCAGGCGTAGAGCTTGGA---TTCGGT 1128
BSNT_05297___ 1177 GGGACAACTA-CTGATACGTTAGTTGGCAGAGGACAAGCTGTCAGCGCGT 1225
|.||||||.| | |||.|.||.||||..||||.||||||||||||||
BL01691___cwl 1129 GCGACAACAAGC----ACGCTTGTCGGCAAGGGACGAGCTGTCAGCGCGT 1174
BSNT_05297___ 1226 CTGAAATGAAACGCGGAGACCTTGTGTTCTTTGACACTTACAAAACAAAT 1275
||||||||||.|||||||||.|.||.|||||||||||.||||||||.||.
BL01691___cwl 1175 CTGAAATGAAGCGCGGAGACTTGGTCTTCTTTGACACATACAAAACGAAC 1224
BSNT_05297___ 1276 GGACACGTAGGAATCTA-CTTAGGAAACGGTACTTTCCTAAACGACAATA 1324
||.|||||.||.||.|| ||| ||.||.||.||.|||||.|||||.| |
BL01691___cwl 1225 GGCCACGTGGGCATTTATCTT-GGCAATGGCACATTCCTGAACGATA--A 1271
BSNT_05297___ 1325 CATCTCA--TGGCGTATCTGTTGACTCTATGAGCAATCCTTACTGGAAAA 1372
||.|||| .||.|||||.||.||.|||||||||||.||.||||||||.|
BL01691___cwl 1272 CAGCTCACGCGGGGTATCCGTCGATTCTATGAGCAACCCGTACTGGAAGA 1321
BSNT_05297___ 1373 AAGCATTTAAAGGCGTTGTAAGACGTGTTGTTCAATAA 1410
||||.||.||.||.|||||||||||.||.|||.|||||
BL01691___cwl 1322 AAGCTTTCAACGGAGTTGTAAGACGGGTCGTTGAATAA 1359
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