Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04881 and BL01677
See
Amino acid alignment /
Visit
BSNT_04881 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04881.1.5803.seq
# -bsequence dna-align/BL01677___yusQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04881-BL01677___yusQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04881-BL01677___yusQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04881
# 2: BL01677___yusQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 197/443 (44.5%)
# Similarity: 197/443 (44.5%)
# Gaps: 187/443 (42.2%)
# Score: 492.5
#
#
#=======================================
BSNT_04881 0 -------------------------------------------------- 0
BL01677___yus 1 ATGCCATTTGTCAGGATGGATCTTTTAAAAGGAAGATCAAAGGAAGAGCT 50
BSNT_04881 1 -------------------------------ATGATTGAAGAAATCAATG 19
||||..||.|..|||.|||
BL01677___yus 51 TCGCCGGATCAGCAGATCAGTTCACCAGGCGATGACGGAGGCGATCGATG 100
BSNT_04881 20 TGCCGGAAGATGACTATTTTCAAGTCAT----TAGACAATATGAAAAAAG 65
|.||||||||.||.||||||||.||||| .|| ||..||||..||
BL01677___yus 101 TTCCGGAAGACGATTATTTTCAGGTCATCACCCAG-CACGATGAGGAA-- 147
BSNT_04881 66 CGAATTTTTTTATGATCCATTTTATCTCCAAG----TCGAGCGTACTGAT 111
||.||.||||..||||| ||.||..|.| ||.|.||.||..|.
BL01677___yus 148 -GAGTTCTTTTTCGATCC----TAGCTATATGAACATCAAACGGACGAAG 192
BSNT_04881 112 GAACTAATATACATTCATTTTACACTGAAACAGTCAAGAACAACTGAACA 161
||..|.||.||.|||||..|.|||.|||||.|| || ||.||.|
BL01677___yus 193 GATTTGATTTATATTCACATCACAATGAAAGAG---AG----ACCGATC- 234
BSNT_04881 162 GAAAAAA-----GCACTTTACCGCTCAATCGCGAGCCGGATTCATT-CCG 205
||||||| ||.||.|||| |.|| |||| |.|
BL01677___yus 235 GAAAAAAAGCTGGCTCTGTACC-----AACG-----------CATTGCAG 268
BSNT_04881 206 AGC--TTGGTGTCAGAA-----------------AAGAAGATGTGTTTAT 236
||| ||| ||.|| ||||.||.||..|.||
BL01677___yus 269 AGCGTTTG----CAAAAAAACGCCGGCATCCGCCAAGAGGACGTCATGAT 314
BSNT_04881 237 CATGCTG--GCCG-------GAAATCAGGCTGAGGATTGGTCTTTCGGAA 277
||| || |||| |||| |||.|.|||||.||.||.|
BL01677___yus 315 CAT--TGCAGCCGAAAACGTGAAA-------GAGAACTGGTCGTTTGGGA 355
BSNT_04881 278 ATGGAAGAGCCCAG-----ATGA-TTGAATAA----------- 303
||||||.|||.||| ||.| |||| ||
BL01677___yus 356 ATGGAACAGCACAGCTTGCATCAGTTGA--AAGGGAGCGTTGA 396
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.