Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00451 and BL01669
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00451___ycbK.1.5803.seq
# -bsequence dna-align/BL01669___ycbK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00451___ycbK-BL01669___ycbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00451___ycbK-BL01669___ycbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00451___ycbK
# 2: BL01669___ycbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1028
# Identity: 616/1028 (59.9%)
# Similarity: 616/1028 (59.9%)
# Gaps: 172/1028 (16.7%)
# Score: 1632.5
#
#
#=======================================
BSNT_00451___ 1 ATGAGAGCAGAAGAGCAGAGTA---------AGA---------------- 25
.||||...||.||||.|||||| |||
BL01669___ycb 1 TTGAGTCGAGCAGAGAAGAGTACAGCTGAGCAGAGCGGCCATATTCAACA 50
BSNT_00451___ 26 -----TTCGTGAGGCCGCAGCAGGTACGATTTTTTTGCTGATCGGAACAG 70
||||..|.||.|| |.||..|| |||||.||.|..|.||.||..
BL01669___ycb 51 CGGTGTTCGAAAAGCGGC--CGGGGTCG-TTTTTATGGTCTTTGGGACGA 97
BSNT_00451___ 71 TTTGTTTTGCGTCTAAATCGATTTGGATAAAATGGGCATACCAAATGGGT 120
|.||||||||.||.|||||.||||...|.||||||||.||..||...|||
BL01669___ycb 98 TGTGTTTTGCTTCAAAATCCATTTTTGTCAAATGGGCTTATGAACAAGGT 147
BSNT_00451___ 121 GCTGAGCCAGATGCCGTGCTGCTATACAGGCAGCTGCTGGCTGTTCCGCT 170
||..||||.||.||.||||||.|.|||.||||..|..|.||.|..|||||
BL01669___ycb 148 GCACAGCCGGAAGCGGTGCTGTTGTACCGGCAATTATTTGCGGCGCCGCT 197
BSNT_00451___ 171 GTTTTGGCTGATTTTTTTAATATACCGTCCTCCAA--TGCCAGACGG-TA 217
||||||||||||||||.|..|.||.|| |||.|| |.| ||| ||
BL01669___ycb 198 GTTTTGGCTGATTTTTATTGTGTATCG--CTCAAAGCTTC----CGGCTA 241
BSNT_00451___ 218 AG-----AAAAAAGGAGACCTATGGAAGGCTTGTGGCGCGGGAGTGTTTT 262
|| ||||..||||| |.|..||.|||||||..||.|||.||.|||
BL01669___ycb 242 AGCCTGAAAAAGCGGAGA--TTTTTAAAGCTTGTGCGGCCGGATTGCTTT 289
BSNT_00451___ 263 GTTTTTTTCTGTCTCCCTTGCTTGATTTTATCGGGCTGAACCATGTATCC 312
||||||||||.||.||.|||||||||||||||||.||..||..|||.||.
BL01669___ycb 290 GTTTTTTTCTATCGCCATTGCTTGATTTTATCGGCCTTCACGGTGTTTCT 339
BSNT_00451___ 313 GCAATGGTTGAACGTAT-ATTGCTGATGAGCTATCCGTTGTTTGTGTTTG 361
||||..||||||||.|| |||| ||||||||||.||..||||.||.||
BL01669___ycb 340 GCAACCGTTGAACGGATGATTG-TGATGAGCTACCCCATGTTCGTATT-- 386
BSNT_00451___ 362 GAT--TCACCGTGTGTCGTGACCGGAAAA--GGTCCTCAATTCAGG---- 403
||| |.||||..| |.||.|....|||| |||| ||.||
BL01669___ycb 387 GATCATAACCGCCT-TTGTAAATAAAAAAATGGTC------TCGGGTAAA 429
BSNT_00451___ 404 ACCTCTTCGCAGTTCTG--GCGGTCATGTTT---------GGGCTTTTCT 442
|| ||| || ||..||.||.|| |||||.||.|
BL01669___ycb 430 AC---------GTT-TGCTGCCATCTTGCTTGTGAATGCCGGGCTGTTTT 469
BSNT_00451___ 443 TGGCGCTGGGCGGCTGGAATGCTG--AGCTTTTCCAGGCGAATATGATTG 490
||||..|.|||||.|||.||| || ||| .||..|.|||||..||...|
BL01669___ycb 470 TGGCTGTCGGCGGATGGGATG-TGCAAGC-ATTGGAAGCGAACCTGTCAG 517
BSNT_00451___ 491 GAGCTGTATTCATTTTGTTATCTTCGGCCGTCTATGCTGGTTATCTTGTC 540
|.|||.|.||.||..|.||.||..|.|.||..|||||.|..||||||||.
BL01669___ycb 518 GGGCTTTTTTGATCCTATTGTCCGCTGTCGCTTATGCGGCCTATCTTGTT 567
BSNT_00451___ 541 CTTTCCGG-GCATCTCGTCCATCAAATCGGGGGGATCCGTCTCAATGCAT 589
.|..|.|| |.| ||.||||.|||||||||.|||||.||..|.|||||.|
BL01669___ycb 568 GTGGCGGGAGGA-CTTGTCCGTCAAATCGGAGGGATTCGAATGAATGCCT 616
BSNT_00451___ 590 ACGGGATGACAGCTGCTGGAGCTGCCAT------------GATGCTTTAC 627
|.||.|||.|.||.||..|...|||.|| |.|||||..|
BL01669___ycb 617 ATGGAATGTCGGCAGCAAGTCTTGCGATGGCCGGTTATGCGCTGCTTCGC 666
BSNT_00451___ 628 AC----AGGGATAAAATCGGCGGCTGGCATGAATACGCCAATGGTAGCAT 673
.| ||.|| |.||.||| |||| || ||.|..|.|
BL01669___ycb 667 TCGCTGAGAGA-ACAACCGG----------GAAT-CG----TGCTTTCTT 700
BSNT_00451___ 674 ATCCGCTTTCTATGTATGGTTTGTTCGCGGTAATTGCAGTCGTAACCACT 723
||||.|...|.|||||||||||.||...|.|.|||||.|..||.||.||.
BL01669___ycb 701 ATCCTCCCGCAATGTATGGTTTTTTTATGATCATTGCGGCGGTGACGACG 750
BSNT_00451___ 724 GTGATTCCATTTGTGCTAATGCTTGAGGGCAT-AAGACGAATCGGGGCAC 772
||.|||||.|||.|..|.|||||.||.||||| ||| ||.||.||.||..
BL01669___ycb 751 GTCATTCCTTTTTTATTCATGCTGGAAGGCATGAAG-CGGATAGGAGCGG 799
BSNT_00451___ 773 AGCGAGCCGCCGCCATTTCAATGGCAGGGCCTGTCCTGACGATTTTCTAT 822
|.||||..||||.||||||.|||...||.||.|||||.||.||.|||...
BL01669___ycb 800 AACGAGGGGCCGTCATTTCCATGATCGGCCCCGTCCTCACCATCTTCGGA 849
BSNT_00451___ 823 GGAGCTTTATTTCTCGGTGAACGGCTTCGACTTATTCAAG-TCATTGGAT 871
||.|.|||.|||.|....||||| || |.|.||..| |||.|||.|
BL01669___ycb 850 GGTGTTTTGTTTTTAAACGAACG--TT----TAACTCCCGTTCAGTGGCT 893
BSNT_00451___ 872 GCACTGCTGTATTCTTTGT---CATTACGG-------GCATGGAATACAG 911
|...||| ||..|.|| |.|.|||| || ||||||||.|
BL01669___ycb 894 GGGGTGC----TTGCTAGTGCACCTGACGGTTAGTCTGC-TGGAATACCG 938
BSNT_00451___ 912 GAAGCTGAAAACAGGAAAAAAAGAATAA 939
| |||.||
BL01669___ycb 939 G-------AAATAG-------------- 945
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