Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05586 and BL01665
See
Amino acid alignment /
Visit
BSNT_05586 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence dna-align/BSNT_05586___mta.1.5803.seq
# -bsequence dna-align/BL01665___mtaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05586___mta-BL01665___mtaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05586___mta-BL01665___mtaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05586___mta
# 2: BL01665___mtaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 920
# Identity: 470/920 (51.1%)
# Similarity: 470/920 (51.1%)
# Gaps: 313/920 (34.0%)
# Score: 1063.0
#
#
#=======================================
BSNT_05586___ 1 ATGAAATAT-CAAGTTAAACAAGTGGCGGA-------GATATCAG-GTGT 41
|||||| || .||||.||..|||||||.|| |..||||| |||
BL01665___mta 1 ATGAAA-ATGAAAGTAAAGGAAGTGGCCGATTTAGTCGGCATCAGTGTG- 48
BSNT_05586___ 42 TAGCATTCGGACGCTTCATCACTATGACAA--------TATTGAGCTTCT 83
||.||.||.|||||.|||||..| |||| |||
BL01665___mta 49 -------CGCACACTGCATCATTATGATGAAATCGGGTTATT-AGC---- 86
BSNT_05586___ 84 GAATCCTTCAGCGCTTACTGATGCTGGGTATCGTTTGTA--CAG-TGACG 130
|||.||.|.|...||.||.||.||.|||||..|||| ||| ||||
BL01665___mta 87 ---TCCGTCGGAGACAACCGAAGCCGGATATCGGCTGTATTCAGATGAC- 132
BSNT_05586___ 131 CAGACCTGGAAAGACTGCAGCAGATTTTATTTTTCAAGGAATTCGGGTTT 180
||.|||||||..||||||||.||.||||||||||..||..|.|..||.
BL01665___mta 133 --GATCTGGAAAAGCTGCAGCAAATCTTATTTTTCAGAGAGCTTGACTTC 180
BSNT_05586___ 181 CGTTTGGATGAAATTAAAGAG-ATGCTGGA-------TCATCCGAATTTT 222
|.|||..|..|.|||||| || ||.||.|| ||| |||
BL01665___mta 181 CCTTTAAAAAAGATTAAA-AGCATTCTTGAGAACCCTTCA-------TTT 222
BSNT_05586___ 223 GACCGGAAAGCGGCACTTCAG-----TCGCAAAAGGAGATATTGATGAAG 267
|||..|||.|.|||.|||||| .||||||..| .||.||.||
BL01665___mta 223 GACAAGAATGAGGCGCTTCAGCTCCACCGCAAAGCG-----CTGCTGGAG 267
BSNT_05586___ 268 AAAAAACAAAGAATGGA-------TG---AGATGATT-CGAACAATTGAC 306
|||| ||| || |.|||||| || |||||.||.
BL01665___mta 268 AAAA----------GGAGCCGGCTTGACCAAATGATTGCG-ACAATCGAT 306
BSNT_05586___ 307 AGGACGCTTTTGTCCA--TTG---ATGGAG----------GGGAAACGAT 341
|..||| .|||| ||| |.|||| |..||||||.
BL01665___mta 307 AAAACG-----ATCCAATTTGCGAAAGGAGAAATCAACATGACAAACGAG 351
BSNT_05586___ 342 GAATAA---GAGGGATTT-ATTT---------GCCGGATTAAGCAAGAAA 378
|||.|| |.|||.||| |||| .|||.|| .||.||
BL01665___mta 352 GAAAAATTCGCGGGTTTTGATTTCAGTCAAAACCCGTAT-----GAGGAA 396
BSNT_05586___ 379 GACATTGAAGAGCACCAGCAG--ACATATGCT-----GATGAA---GTCA 418
|| ||| ||.| || ||| |||||| |||
BL01665___mta 397 GA--------AGC----GCGGGAAC----GCTGGGGAGATGAAGCCGTC- 429
BSNT_05586___ 419 GAAAGATGTATGG---AAAGGAAATCG----CAGAAG--AAACAGAGAAA 459
||.||||..|.|| |.|...||||| |.|||| .||| ||.|||
BL01665___mta 430 GACAGATCGAAGGCCTATATCGAATCGATGTCCGAAGGTGAAC-GAAAAA 478
BSNT_05586___ 460 AGGACATCTGCATACTCGGCAGATGATTGGAGCACGATCATGGCTGAATT 509
| |.||||.|| || |||.
BL01665___mta 479 A------------------------AATGGAACA--------GC--AATA 494
BSNT_05586___ 510 TGATTCGATTTACAGACGAATTGCGGCGC---GAATGAAGCATGGGCCC- 555
|||..|.|||||||||..|||.||.||.| || |||| |.||||
BL01665___mta 495 TGACGCCATTTACAGAAAAATCGCCGCTCTCAGA--GAAG---GCGCCCC 539
BSNT_05586___ 556 -------GATGATGCAGAGGTTCAGGCCGC--------AGTGGGGGCATT 590
||.||.||| |||||.|| |.|||
BL01665___mta 540 CGACTCAGAGGAAGCA------CAGGCGGCTATAAAGGAATGG------- 576
BSNT_05586___ 591 TCGCGATCATATTTGCCACTATCATTACGATTGCACC------------- 627
|.|.|||.||...||.||..||||
BL01665___mta 577 -------------TACGACTTTCTGAACAATAACACCGGCCACAGCTATT 613
BSNT_05586___ 628 --CTCGACATTTTCAGAGGACTCGGGGAAGTGTATATCACTGACGAGCGA 675
||.||...|||||.|||.||.||..||.|||||.|..|||||.||||.
BL01665___mta 614 CGCTGGAAGCTTTCAAAGGTCTAGGACAAATGTATGTGGCTGACAAGCGC 663
BSNT_05586___ 676 TTTACCGATTCA-ATCAATCAATA-----------TGGAGAAGGTCTTGC 713
|||| |||...| |||.||||||| |||.||||.||.||
BL01665___mta 664 TTTA-CGAAAAACATCGATCAATACGGCGCCGGCTTGGCGAAGTTCATG- 711
BSNT_05586___ 714 CGCTTTTTTGCGGGAGGCAATCATCA-----TTTACTGTGAC---CATCA 755
||| ||.|| |||.| |||.| |||| .||||
BL01665___mta 712 --------TGC--GACGC---CATGACGGTGTTTGC--TGACAGAAATCA 746
BSNT_05586___ 756 GGAA-AACCCCCGGCCGTAA 774
|||| ||
BL01665___mta 747 GGAATAA------------- 753
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.