Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00365 and BL01658
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00365___ybdO.1.5803.seq
# -bsequence dna-align/BL01658___ybdO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00365___ybdO-BL01658___ybdO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00365___ybdO-BL01658___ybdO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00365___ybdO
# 2: BL01658___ybdO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1228
# Identity: 875/1228 (71.3%)
# Similarity: 875/1228 (71.3%)
# Gaps: 86/1228 ( 7.0%)
# Score: 3083.5
#
#
#=======================================
BSNT_00365___ 1 ATGCGTCTGAATCGGCAATTTATCCGCACTCAGCTGATGGCACAGAACAT 50
||||||||.|||.|.||||..|||||.||.||||||||||..|||||.||
BL01658___ybd 1 ATGCGTCTCAATAGTCAATACATCCGTACACAGCTGATGGTCCAGAATAT 50
BSNT_00365___ 51 ATTGAGCAAG-AATGCGCCTGCCAAACGGGAGAATGCGACTGAAAA---- 95
||||| .||| ||||||.||| ||.|.|||..|||
BL01658___ybd 51 ATTGA-AAAGAAATGCGGCTG------------ATACAACTTTAAAAAAT 87
BSNT_00365___ 96 ------TCCAG------CGGCAGTTCTGGAAAAGGCATACAGCAGGCTTA 133
||| | |.||.|||..|.|.||||| ||||||
BL01658___ybd 88 GTCTCTTCC-GATATCACTGCCGTTGCGAAGAAGGC---CAGCAG----- 128
BSNT_00365___ 134 AGTCACAATCTTCAA-CTGGGGGA--ATC-------------AATCAGTT 167
|||| |.|||.|| ||| |.|.||.|
BL01658___ybd 129 -----------TCAAGCAGGGAGAGCATCGAAAGAAAGTTTGAGTAAGCT 167
BSNT_00365___ 168 CAATTATTCTAAAACCAGCGTGTCGGGAAACA--GCGGGGCGTTCA---- 211
.||.|| ||.|||..|..||.|.|.|||.|| .|||.||.||||
BL01658___ybd 168 GAACTA--CTCAAAGGACAGTATTGTGAATCATGCCGGAGCTTTCAGGCG 215
BSNT_00365___ 212 -GCAAAGTGTATCAATCAGCGAATGATCGAACAGTGACAGACACAGGGGA 260
||| ||..||.||||.|||||||||||.||.|||||.||||||.|
BL01658___ybd 216 GGCA-----TACGAAGCAGCAAATGATCGAACTGTCACAGATACAGGGAA 260
BSNT_00365___ 261 AGAAACAGTGATTCAAT-CCCAAAACCACTATGAATCTGAGAGTGATATC 309
||||||...|||| ||| |||||||||.|||||..||.||.|||||.|||
BL01658___ybd 261 AGAAACGAAGATT-AATGCCCAAAACCCCTATGTGTCAGAAAGTGACATC 309
BSNT_00365___ 310 AGAATCAAAATACTAGATGAAAAATACAGCAGGATGAATGCGATTAATAA 359
||.|..|||||..||||||||||||||||||..||.|||||.||.||.||
BL01658___ybd 310 AGGAAAAAAATCTTAGATGAAAAATACAGCAAAATAAATGCAATGAACAA 359
BSNT_00365___ 360 AACAAAGTCTGATCCATTAGGCTATATTAAGGATAAGTACCAAAATTCAA 409
|||.||..|.||.||.||||||||.|||||||||||.|||.||||..|.|
BL01658___ybd 360 AACGAAACCCGACCCTTTAGGCTACATTAAGGATAAATACAAAAACCCCA 409
BSNT_00365___ 410 AGTCTCCTTATTTCAGAAGTGATCTGTCAGCTGCAGAAAGACAGGCCGCT 459
|.||.|||||||||||||.|||..||||.||.||||||||||||||.||.
BL01658___ybd 410 ATTCCCCTTATTTCAGAAATGACTTGTCGGCAGCAGAAAGACAGGCTGCA 459
BSNT_00365___ 460 TACGATAATGAAACAGAATGGTTATTCAAAGGGAAGGCGCAAAACTATAA 509
||.||.||||||||.||.|||.|.||||||||.||||||||||.||||||
BL01658___ybd 460 TATGACAATGAAACTGAGTGGCTGTTCAAAGGAAAGGCGCAAAGCTATAA 509
BSNT_00365___ 510 CCTTCAGGATGCTGTGTTTCGGAATGTCACATTTCATGGGGAAGTGGAAG 559
..|.||||||||.|.||||||.|||||.||.|||.||||||||||.||..
BL01658___ybd 510 TATGCAGGATGCCGCGTTTCGAAATGTGACTTTTAATGGGGAAGTAGAGA 559
BSNT_00365___ 560 CTGAGAATGAAAAGGTGTATCAGCGGGGACAGGTTAACCAGCAGCTGCAA 609
|.||||||||.||.||.||||||||..|.||.||.|||.|.|||||.|||
BL01658___ybd 560 CGGAGAATGAGAAAGTATATCAGCGCAGCCAAGTCAACAAACAGCTTCAA 609
BSNT_00365___ 610 GTACTGTTGAATCGAAACCATATTCATATTCCAGAGGGGACAGAGCTGAC 659
|..|||.||.|||.|.|.||||||...|||||||.||...|.|.|||.||
BL01658___ybd 610 GCGCTGCTGGATCAATATCATATTGCCATTCCAGCGGATGCGGCGCTCAC 659
BSNT_00365___ 660 GTTTACAATCACACCGATTGACTATCAGGTGCGGGTAAGCGGGTCAGACG 709
.|||||.||.|||||||||||.|||||.||...|||||||||..||||.|
BL01658___ybd 660 CTTTACGATTACACCGATTGATTATCAAGTAAAGGTAAGCGGAACAGATG 709
BSNT_00365___ 710 ATCAGGATCTGATCAAGCAAATTGAGCAAGTGCTGCAATCTGGAGACAAC 759
||.||.|.||.|||.|.||||||||.|||.|..|||||||.|||||.|||
BL01658___ybd 710 ATGAGCAACTCATCCATCAAATTGAACAAATATTGCAATCAGGAGAAAAC 759
BSNT_00365___ 760 AGCAAAGAACTATTTTTGCACATCATGAAAAGCCAAAGCAGTGATTCAGC 809
||||||.|..|||||.||||.||||||||||||...|||||.|||||.||
BL01658___ybd 760 AGCAAACAGTTATTTCTGCATATCATGAAAAGCTTGAGCAGCGATTCGGC 809
BSNT_00365___ 810 ACAATTTTCCGAAGAGGCCTATCAAAAGTATCAGGCTGCTCGTGAGATGT 859
|||||.||||.||||.||..|.|||||.||||||.|.|.|||.|||||.|
BL01658___ybd 810 ACAATATTCCAAAGAAGCGCACCAAAAATATCAGACGGTTCGCGAGATAT 859
BSNT_00365___ 860 ATGAAGTTACAGGCTACCATTTGAAGGATTTAGAAGTGATTGATGGGCGG 909
||||.||.|||||.||.||..||||.|||||.||||||.|||||||.||.
BL01658___ybd 860 ATGAGGTGACAGGGTATCACCTGAAAGATTTGGAAGTGGTTGATGGCCGA 909
BSNT_00365___ 910 TACGTCACGCCTGAGGGACGTGACTTAATGGATGTATATAAGGAAGAGCT 959
||.||.||.|||...||.|||||.|||.|.||.||.|||||.||||||||
BL01658___ybd 910 TATGTAACACCTTCCGGCCGTGATTTATTAGAAGTGTATAAAGAAGAGCT 959
BSNT_00365___ 960 TGAAAAAGATCCAGTGCAGAAACAAACGGCT--TCTTATGCTATATCTTA 1007
.||.||.|||||.||.|..||..|||||||| ||| .||.||..||.|
BL01658___ybd 960 GGAGAAGGATCCCGTCCTCAAGAAAACGGCTCATCT--CGCAATCGCTCA 1007
BSNT_00365___ 1008 CTATCGTTCAGAGCTCAGTAAAATCGCGGAAGCCGGGTATAATGCCATTC 1057
.|||.|..|||||||.|..|...|.||||||||||..|||.||.|..|||
BL01658___ybd 1008 TTATGGAGCAGAGCTGAACAGGCTTGCGGAAGCCGAATATGATTCTGTTC 1057
BSNT_00365___ 1058 CGGATTTCATCCTTTCAATTGATTACAGCAATGGATCTCTGAGAGATGTG 1107
|||||||||||.|.||.|||||.||||||||.||.||..||.|.|||...
BL01658___ybd 1058 CGGATTTCATCTTGTCTATTGACTACAGCAACGGGTCATTGCGGGATACA 1107
BSNT_00365___ 1108 GGACAAAGCAAGAGCTATGGGACCGGAGATACCGGGTGGCTTGAAGCATT 1157
||.||||..|||||||||||.|||||.|||||.|..|||||...||.|||
BL01658___ybd 1108 GGGCAAAAGAAGAGCTATGGAACCGGGGATACGGCTTGGCTAAGAGAATT 1157
BSNT_00365___ 1158 AAAGCGTCAAACGGGTGTGAATTATTAG 1185
||||||.|.|||||||||||||.|||||
BL01658___ybd 1158 AAAGCGCCGAACGGGTGTGAATGATTAG 1185
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