Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01235 and BL01657
See
Amino acid alignment /
Visit
BSNT_01235 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_01235___yetN.1.5803.seq
# -bsequence dna-align/BL01657___yetN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01235___yetN-BL01657___yetN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01235___yetN-BL01657___yetN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01235___yetN
# 2: BL01657___yetN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1093
# Identity: 870/1093 (79.6%)
# Similarity: 870/1093 (79.6%)
# Gaps: 32/1093 ( 2.9%)
# Score: 3494.0
#
#
#=======================================
BSNT_01235___ 1 ATGGATTTTGAAATTCGGTTTTTATCCTTTTATGTCATACAGGTGGAAGG 50
|||||.|||||||||||.|...|.||||||||.|||||.|||||.||.||
BL01657___yet 1 ATGGAATTTGAAATTCGCTACATCTCCTTTTACGTCATCCAGGTCGACGG 50
BSNT_01235___ 51 CAAAGATGAGCAGGCGAACAAGCAGTTCAAGCACTTCCAGACCCTTGATA 100
|||.|||||||||||.||||||||.|..||.||.||.|||||.||.||||
BL01657___yet 51 CAAGGATGAGCAGGCCAACAAGCAATATAAACATTTTCAGACGCTGGATA 100
BSNT_01235___ 101 CGGGCGAATTTGAAGAAAGCGAGCTGAAGGACTTTC-TCGACGGGGAACT 149
|.|..|||||||||.|.|||||||||||||| |||| |.|||||||||.|
BL01657___yet 101 CAGAGGAATTTGAAAACAGCGAGCTGAAGGA-TTTCTTAGACGGGGAATT 149
BSNT_01235___ 150 GAAAAAAATCGTCAAACGGAAAGCCGACCGCCATCCGCAGTCCGAGCAGG 199
|||||||||||||||.|||||||||||.|||||||||.|.||.|||||||
BL01657___yet 150 GAAAAAAATCGTCAAGCGGAAAGCCGAACGCCATCCGAAATCGGAGCAGG 199
BSNT_01235___ 200 TCCCGACGAAAATCGGCCATTTTATCGTCGAGCCCGGCCACGAGCTCGAT 249
|.||||||||||||||||..||.|||...|||||.||.||.|||||.|||
BL01657___yet 200 TGCCGACGAAAATCGGCCGCTTCATCACAGAGCCGGGGCATGAGCTTGAT 249
BSNT_01235___ 250 TCCAACCCAAACTACAACATGTT--------CAACCGCGCGCGTCTGGCG 291
||.||.||.||||||||..|||| ||| ..||||||
BL01657___yet 250 TCTAATCCGAACTACAATCTGTTTCACAAAACAA--------AACTGGCG 291
BSNT_01235___ 292 GAAACAAAAGAAGACTTCAATGAGCTGAGTGAGCAGTTCGTCCGCACGTA 341
||.|||||.|||||.||||||||.|||||.||.||||||||||||||.||
BL01657___yet 292 GAGACAAAGGAAGAATTCAATGAACTGAGCGAACAGTTCGTCCGCACATA 341
BSNT_01235___ 342 CCTCGACACAAGCGCGGTTCGCGGCGGCGTGTTTCTCGTCGCTTCGGCCG 391
|||||||||.|||||.||..|.||.|||||||||.|.||.||..|.||||
BL01657___yet 342 CCTCGACACGAGCGCCGTCAGGGGAGGCGTGTTTTTAGTGGCGACAGCCG 391
BSNT_01235___ 392 TGCCGAGAAAATACTTTGACGAGTCATTTGTCTTCATTATGAAATGTGAT 441
|.|||.|.||||||||.||.||..||||||||||..|.|||||.||.||.
BL01657___yet 392 TACCGCGCAAATACTTCGATGATACATTTGTCTTTGTCATGAAGTGCGAC 441
BSNT_01235___ 442 TTTGAGCCGAAGGTCGC-CCGCATCTCTGACGCGTCTTCTCTCATTAAAA 490
|||||.||||||||||| .|| |||.|.||.|..||.||.||.|||...|
BL01657___yet 442 TTTGAACCGAAGGTCGCTACG-ATCGCCGATGAATCGTCGCTGATTCGCA 490
BSNT_01235___ 491 AAGTCGAAATGGCGATCACGACAAAAAACATGAAAAGCATCCAATACCCG 540
|.||||||||||||||.|||||.||||||||||||...||.||.||||||
BL01657___yet 491 AGGTCGAAATGGCGATTACGACGAAAAACATGAAATCGATTCAGTACCCG 540
BSNT_01235___ 541 TACATGCCAGAGGAAGGAATGGTCGAGGAAGGTGAGCTGAAAATCCACCA 590
.|||||||.||.||.||.|||...||||||.|.||..|||||||||||||
BL01657___yet 541 CACATGCCTGAAGAGGGCATGACAGAGGAAAGCGAAGTGAAAATCCACCA 590
BSNT_01235___ 591 GGCTTCGCACGCCCGCTATTTTGAGGACTTTCTGAAATTCGTCGAGTACG 640
|||.||||||||||||||.|||||.|||||..|.||||||||||||||||
BL01657___yet 591 GGCCTCGCACGCCCGCTACTTTGAAGACTTCTTAAAATTCGTCGAGTACG 640
BSNT_01235___ 641 GAGAATCGATGCCGGAAATCATGAAAAATCAGGTCATGAACATGGTACAG 690
|.||.||||||||||||||||||||....||.||.|||||||||||.|||
BL01657___yet 641 GCGAGTCGATGCCGGAAATCATGAAGTCACAAGTGATGAACATGGTGCAG 690
BSNT_01235___ 691 GAGCACGTCTACGAGACATTTGAAGACAACAGCGAAGAGCTCAAGCAGTT 740
||||||||.|||||..|||||||||||||.||||||||.|||.|||||||
BL01657___yet 691 GAGCACGTGTACGAAGCATTTGAAGACAAAAGCGAAGAACTCCAGCAGTT 740
BSNT_01235___ 741 CGAGCACGACATTGAGATTTGGGAAGCAAGCGAAAAACGGGAAATCCAAG 790
.||.||||||.|.||.||.||||||||.||||||||.|||||.||.||.|
BL01657___yet 741 TGAACACGACCTCGAAATCTGGGAAGCGAGCGAAAAGCGGGAGATTCAGG 790
BSNT_01235___ 791 AGCGCCTCGACACCCATCAAGTCATCGAAGCCTCCGCCCAAATCATCGAG 840
|.||.||.||||||||.|||||||||||||||||.|||||||||.|.|||
BL01657___yet 791 AACGTCTTGACACCCACCAAGTCATCGAAGCCTCAGCCCAAATCGTTGAG 840
BSNT_01235___ 841 CACACGCCAGAGGCCCAGCTGAAAATGAAAGTCGGAGAAACAGAGATTAA 890
||||.|||.|||||..|||||||||||||..|.||||||||.||||||||
BL01657___yet 841 CACATGCCTGAGGCAGAGCTGAAAATGAAGCTGGGAGAAACCGAGATTAA 890
BSNT_01235___ 891 GGGATTGCTAGCGGATTTTGGCGATTCTATTCATCTCGCAAAAGTAAACG 940
.||||||||.||.||.||.||.||.||.||.||.|||||.||||||||||
BL01657___yet 891 AGGATTGCTGGCCGAGTTCGGAGACTCGATCCACCTCGCCAAAGTAAACG 940
BSNT_01235___ 941 GGCGCTATGTCGCGCTGATTGAAGCCGAGACGATTTCGTTTGAGAAAGGC 990
|.||||||||.|||||.|||||||||||.||||||||||||||.||.|||
BL01657___yet 941 GCCGCTATGTGGCGCTCATTGAAGCCGAAACGATTTCGTTTGAAAAGGGC 990
BSNT_01235___ 991 AGTTCGCCGGTGGAGTTTTATAAGCCTGAGGGGCTGCATGAGGTGATTGA 1040
||.||.|||||.|||||||||||.||||||||.|||||||||||||||||
BL01657___yet 991 AGCTCTCCGGTCGAGTTTTATAAACCTGAGGGTCTGCATGAGGTGATTGA 1040
BSNT_01235___ 1041 GCGGATAAAAGGGAAAAATAT---------AAATGACGATTAA 1074
|||||| |.||||.||.|| |.||||..|.|||
BL01657___yet 1041 GCGGAT---ACGGAATAAAATTGACAGGGAAGATGAGAAATAA 1080
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.