Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00456 and BL01654
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00456___ycbN.1.5803.seq
# -bsequence dna-align/BL01654___ycbN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00456___ycbN-BL01654___ycbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00456___ycbN-BL01654___ycbN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00456___ycbN
# 2: BL01654___ycbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 936
# Identity: 745/936 (79.6%)
# Similarity: 745/936 (79.6%)
# Gaps: 24/936 ( 2.6%)
# Score: 2912.0
#
#
#=======================================
BSNT_00456___ 1 TTGACTTATATCGTACAAACAAACGGGCTGACCAAAACGTATC--AGGGC 48
||||||||.|||||||||||||.||||||.|||||.||.| || |||.|
BL01654___ycb 1 TTGACTTACATCGTACAAACAAGCGGGCTTACCAAGACAT-TCAAAGGTC 49
BSNT_00456___ 49 AAAGAGGTCGTATCCAATGTCAGCATGCATATTAAAAAAGGTGAAATCTA 98
||||.||.||.||.|||||.|||||||||||...|||.||.|||||.||
BL01654___ycb 50 -AAGAAGTTGTTTCAAATGTAAGCATGCATATACGAAAGGGAGAAATATA 98
BSNT_00456___ 99 CGGCTTTCTCGGCCCGAACGGCGCGGGGAAAACAACCATCATGAAAATGC 148
|||.|||||||||||||||||.||.||.|||||.|||||||||||.||||
BL01654___ycb 99 CGGTTTTCTCGGCCCGAACGGAGCCGGAAAAACGACCATCATGAAGATGC 148
BSNT_00456___ 149 TGACGAGCCTTGTCAAACCGACAAGCGGTGAAATCATCATCCTTGGGAAC 198
||||||||||.||.||||||||||||||.|||||||..|||||||||.|.
BL01654___ycb 149 TGACGAGCCTCGTGAAACCGACAAGCGGCGAAATCAATATCCTTGGGCAT 198
BSNT_00456___ 199 AAGTTCACCCACA-CG-TCATATGAGGTGCTGGGGAACATCGGCAGCATG 246
|||.|.| ||.| || |||||.|||.|.||.|||||.||.|||||||||
BL01654___ycb 199 AAGCTGA--CAAATCGATCATACGAGATTCTCGGGAAAATAGGCAGCATG 246
BSNT_00456___ 247 ATTGAATATCCGATTTTTTATGAAAACCTGACAGCTGAAGAAAATTTAGA 296
||.|||||.|||||||||||||||||.||||||||..|||||||||||.|
BL01654___ycb 247 ATCGAATACCCGATTTTTTATGAAAATCTGACAGCCAAAGAAAATTTAAA 296
BSNT_00456___ 297 TCTGCATTGTGAATATATGGGATACCACAATAAAAAAGCC---ATACAAG 343
||||||||||||.|||||||||||.|||||| |||||| ||.||.|
BL01654___ycb 297 TCTGCATTGTGAGTATATGGGATATCACAAT---AAAGCCAAGATTCAGG 343
BSNT_00456___ 344 AAGTGCTGGATATGGTGAATTTAAAACAAATCGATAAAAAACCCGTCAAA 393
||||||||||.|||||||||||||||.|.|||||.|..|||||.||||||
BL01654___ycb 344 AAGTGCTGGACATGGTGAATTTAAAAAATATCGACAGCAAACCTGTCAAA 393
BSNT_00456___ 394 ACCTTTTCCCTCGGGATGAAGCAGCGCCTTGGAATTGCGCGTGCCATCCT 443
||.|||||||||||.|||||||||||.||||||||.|||||.|||||.||
BL01654___ycb 394 ACATTTTCCCTCGGTATGAAGCAGCGTCTTGGAATCGCGCGGGCCATTCT 443
BSNT_00456___ 444 CACGAAGCCGGACCTGCTTATTCTGGATGAGCCGGTGAATGGTCTTGACC 493
|||.||.||..||.||||.||..|||||||||||.|.|||||.|||||.|
BL01654___ycb 444 CACCAAACCCTACTTGCTCATCTTGGATGAGCCGATTAATGGCCTTGATC 493
BSNT_00456___ 494 CTCTCGGCATTAAAAAGATCAGGCAATTGTTTCAAGTGCTGAGCAAAGAG 543
|..||||.||||||.|.|||||..|.||.||||||||..|||||||||||
BL01654___ycb 494 CCATCGGAATTAAAGAAATCAGAAACTTATTTCAAGTATTGAGCAAAGAG 543
BSNT_00456___ 544 TACGGTATGACGCTGCTGATCTCAAGCCACCTGCTGGGTGAAATCGAACA 593
||.||.|||||..||||.||||||||||||.|..||...|||.|.||.||
BL01654___ycb 544 TATGGCATGACATTGCTCATCTCAAGCCACATCTTGAACGAAGTAGAGCA 593
BSNT_00456___ 594 AATCGCGGACACAATCGGCGTCATTCGGGACGGCAGGCTGCTTGAAGAGG 643
|||.||.||.||||||||.||.|||||||||||||||||..|||||||.|
BL01654___ycb 594 AATTGCAGATACAATCGGAGTGATTCGGGACGGCAGGCTTGTTGAAGAAG 643
BSNT_00456___ 644 TATCAATGGAGGATGTCAGGGGCCAGAACACTGAATACATCGAGCTTGTT 693
||||.|||||....||.|||||.|.||||||.||.|||||.||.||.||.
BL01654___ycb 644 TATCGATGGAAAGCGTAAGGGGACGGAACACAGAGTACATTGAACTCGTG 693
BSNT_00456___ 694 ACATCGAATCAGACAAGG---GCCTGCTTTGTGCTGGAGAAAGAGCTGCA 740
||..||||.|| |..| ||.|||||||||||.||..|.||||||||
BL01654___ycb 694 ACGCCGAACCA---ATTGCATGCTTGCTTTGTGCTTGAACATGAGCTGCA 740
BSNT_00456___ 741 -ATTAACCAACTTTAAAATATTAAATGAGAAAACGATTCGAATTTACGAG 789
||| .|.||.|||||||||.|||||||.||||||||.||||||||.||.
BL01654___ycb 741 GATT-GCTAATTTTAAAATACTAAATGATAAAACGATCCGAATTTATGAT 789
BSNT_00456___ 790 GCTGAAGCCTCTCAGGCTGCCATATCCAAAGCATTGATTTTAAATGATGT 839
||.|||||.|||||..|.|||||.||.|||||..|||||||.||||||||
BL01654___ycb 790 GCCGAAGCTTCTCAAACAGCCATTTCTAAAGCTCTGATTTTGAATGATGT 839
BSNT_00456___ 840 AGACATTGAATCAATGAACAAAAAGTATACGACGCTGGAGGATTATTTTA 889
|||.||||||||.|||||.||||||.||||..||||.|||||.||.||..
BL01654___ycb 840 AGAAATTGAATCCATGAATAAAAAGCATACTTCGCTTGAGGACTACTTCC 889
BSNT_00456___ 890 TCAAATTGATCAACGGCAATAGC-ATCAGTGCGTAA 924
|||..||.|||||||||||| || .|||..||.|||
BL01654___ycb 890 TCAGCTTAATCAACGGCAAT-GCGGTCAACGCATAA 924
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