Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00442 and BL01650

See Amino acid alignment / Visit BSNT_00442 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:05
# Commandline: needle
#    -asequence dna-align/BSNT_00442___ycbG.1.5803.seq
#    -bsequence dna-align/BL01650___ycbG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00442___ycbG-BL01650___ycbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00442___ycbG-BL01650___ycbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00442___ycbG
# 2: BL01650___ycbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 732
# Identity:     534/732 (73.0%)
# Similarity:   534/732 (73.0%)
# Gaps:          48/732 ( 6.6%)
# Score: 1941.5
# 
#
#=======================================

BSNT_00442___      1 GTGTACGAAGGTTTAGAGGATTTGAAAGTCGATACAGTCAATCGGAAAAC     50
                     |||.|.||||.|.|.||....|||.|.|||||..||||||||||.||.||
BL01650___ycb      1 GTGGAAGAAGATATGGAAACATTGCAGGTCGAATCAGTCAATCGCAAGAC     50

BSNT_00442___     51 ATTAGCCAAGCAGGTCATCGAACGGATTGTCCATTTATTATCGAGCGGAC    100
                     .||.||.||.|||||..|.|||||.||.||||||||||||||.|||||.|
BL01650___ycb     51 TTTGGCAAAACAGGTTGTTGAACGAATCGTCCATTTATTATCAAGCGGCC    100

BSNT_00442___    101 AGTTGAGGGCCGGAGACAAATTGCCGACAGAAATGGAACTGATGGACATT    150
                     ||||||...|.||.||||||.|||||||.||.||.||.||.|||||.|..
BL01650___ycb    101 AGTTGAAACCGGGGGACAAACTGCCGACGGAGATTGAGCTCATGGAAAAG    150

BSNT_00442___    151 TTGCATGTCAGCAGGCCGGTGCTTCGGGAGGCACTCAGTTCACTTGAAAC    200
                     .||.||||||||||.||.||.||.||.||.||..|.|..||.||.|||||
BL01650___ycb    151 CTGAATGTCAGCAGACCCGTTCTCCGCGAAGCTTTAATATCGCTCGAAAC    200

BSNT_00442___    201 GCTGGGCGTCATTACGAGAAAAACACGAGGGGGCACATATTTCAACGATA    250
                     |||.||..|.||.|..||||||||.||.|..|||||||||||.||.||||
BL01650___ycb    201 GCTCGGAATTATCAAAAGAAAAACCCGGGACGGCACATATTTTAATGATA    250

BSNT_00442___    251 AAATCGGCATGCAGCCGTTTTCCGTCATGCTTGCCTTGGCCACT-GATAA    299
                     ||||||||||.|||||||||||.||||||||.||.|||| ||.| |||||
BL01650___ycb    251 AAATCGGCATTCAGCCGTTTTCTGTCATGCTGGCTTTGG-CAGTCGATAA    299

BSNT_00442___    300 TCTTCCGGCTATCATTGAAGCGCGGATGGCGCTAGAACTCGGACTCGTGA    349
                     |.|.|||||.||.|||||||||.||||||||||.||.|||||.||.||.|
BL01650___ycb    300 TTTGCCGGCCATTATTGAAGCGAGGATGGCGCTGGAGCTCGGGCTTGTCA    349

BSNT_00442___    350 CAATTGCCGCGGAAAAAATCAATGA----------GGAAGAGCTTCAGCG    389
                     |.||.|||||.|||||.||||||||          |.||| |||||||  
BL01650___ycb    350 CGATCGCCGCAGAAAAGATCAATGACAGTCAGCTCGAAAG-GCTTCAG--    396

BSNT_00442___    390 TTTGCAGAAGACGATCGACGATATTGCCAACAGCACTGACAATCTTTATG    439
                           ||| ||||||||...|||.||.||||||||.||.||||.|||||
BL01650___ycb    397 ------GAA-ACGATCGATATTATAGCAAACAGCACGGATAATCATTATG    439

BSNT_00442___    440 GTGAAGCGGATAAAGAGTTCCATCGAATTATTGCGTTAAGCGCCAATAAC    489
                     |.|||||||||||.||.||.||.||.|||||.||.||.|||||.||.|||
BL01650___ycb    440 GAGAAGCGGATAAGGAATTTCACCGGATTATCGCTTTGAGCGCGAACAAC    489

BSNT_00442___    490 CCCGTCGTTGAAGGGATGATTCAGTCCCTGTTGATCACCCATGCGAAAAT    539
                     ||.||..||||||||||||||||.||.||.||||||||.||.||.|||||
BL01650___ycb    490 CCGGTGCTTGAAGGGATGATTCAATCGCTCTTGATCACACACGCCAAAAT    539

BSNT_00442___    540 TGACAGCCAAATTCCGTACAGGGAGAGAGATGTAACGGTCGAATATCACA    589
                     .||||||||.|||||.||.|||||.||.||....||.|||||||||||.|
BL01650___ycb    540 CGACAGCCAGATTCCATATAGGGAAAGGGACCGGACTGTCGAATATCATA    589

BSNT_00442___    590 AAAAAATCTACGACGCCCTTGCCA--AAAGAGATCCGTACAAAGCACATT    637
                     ..||.||.|...|.||||||  ||  ||||.||.||.||..||||..||.
BL01650___ycb    590 CGAATATTTTGAAAGCCCTT--CAACAAAGGGACCCATATCAAGCCTATC    637

BSNT_00442___    638 ACCACATGTATGAGCATCTGAAATTTGTCCGTGACAAAATTTTAAAAGGA    687
                     ||||.||||||||||||.|.||||||||.|||||||||||     |..||
BL01650___ycb    638 ACCATATGTATGAGCATTTAAAATTTGTACGTGACAAAAT-----ACTGA    682

BSNT_00442___    688 ATG--------GATGAAAAA---------TAA    702
                     |||        |||||||||         |||
BL01650___ycb    683 ATGGTCTTCGTGATGAAAAAAACAATCATTAA    714


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