Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00442 and BL01650
See
Amino acid alignment /
Visit
BSNT_00442 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00442___ycbG.1.5803.seq
# -bsequence dna-align/BL01650___ycbG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00442___ycbG-BL01650___ycbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00442___ycbG-BL01650___ycbG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00442___ycbG
# 2: BL01650___ycbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 732
# Identity: 534/732 (73.0%)
# Similarity: 534/732 (73.0%)
# Gaps: 48/732 ( 6.6%)
# Score: 1941.5
#
#
#=======================================
BSNT_00442___ 1 GTGTACGAAGGTTTAGAGGATTTGAAAGTCGATACAGTCAATCGGAAAAC 50
|||.|.||||.|.|.||....|||.|.|||||..||||||||||.||.||
BL01650___ycb 1 GTGGAAGAAGATATGGAAACATTGCAGGTCGAATCAGTCAATCGCAAGAC 50
BSNT_00442___ 51 ATTAGCCAAGCAGGTCATCGAACGGATTGTCCATTTATTATCGAGCGGAC 100
.||.||.||.|||||..|.|||||.||.||||||||||||||.|||||.|
BL01650___ycb 51 TTTGGCAAAACAGGTTGTTGAACGAATCGTCCATTTATTATCAAGCGGCC 100
BSNT_00442___ 101 AGTTGAGGGCCGGAGACAAATTGCCGACAGAAATGGAACTGATGGACATT 150
||||||...|.||.||||||.|||||||.||.||.||.||.|||||.|..
BL01650___ycb 101 AGTTGAAACCGGGGGACAAACTGCCGACGGAGATTGAGCTCATGGAAAAG 150
BSNT_00442___ 151 TTGCATGTCAGCAGGCCGGTGCTTCGGGAGGCACTCAGTTCACTTGAAAC 200
.||.||||||||||.||.||.||.||.||.||..|.|..||.||.|||||
BL01650___ycb 151 CTGAATGTCAGCAGACCCGTTCTCCGCGAAGCTTTAATATCGCTCGAAAC 200
BSNT_00442___ 201 GCTGGGCGTCATTACGAGAAAAACACGAGGGGGCACATATTTCAACGATA 250
|||.||..|.||.|..||||||||.||.|..|||||||||||.||.||||
BL01650___ycb 201 GCTCGGAATTATCAAAAGAAAAACCCGGGACGGCACATATTTTAATGATA 250
BSNT_00442___ 251 AAATCGGCATGCAGCCGTTTTCCGTCATGCTTGCCTTGGCCACT-GATAA 299
||||||||||.|||||||||||.||||||||.||.|||| ||.| |||||
BL01650___ycb 251 AAATCGGCATTCAGCCGTTTTCTGTCATGCTGGCTTTGG-CAGTCGATAA 299
BSNT_00442___ 300 TCTTCCGGCTATCATTGAAGCGCGGATGGCGCTAGAACTCGGACTCGTGA 349
|.|.|||||.||.|||||||||.||||||||||.||.|||||.||.||.|
BL01650___ycb 300 TTTGCCGGCCATTATTGAAGCGAGGATGGCGCTGGAGCTCGGGCTTGTCA 349
BSNT_00442___ 350 CAATTGCCGCGGAAAAAATCAATGA----------GGAAGAGCTTCAGCG 389
|.||.|||||.|||||.|||||||| |.||| |||||||
BL01650___ycb 350 CGATCGCCGCAGAAAAGATCAATGACAGTCAGCTCGAAAG-GCTTCAG-- 396
BSNT_00442___ 390 TTTGCAGAAGACGATCGACGATATTGCCAACAGCACTGACAATCTTTATG 439
||| ||||||||...|||.||.||||||||.||.||||.|||||
BL01650___ycb 397 ------GAA-ACGATCGATATTATAGCAAACAGCACGGATAATCATTATG 439
BSNT_00442___ 440 GTGAAGCGGATAAAGAGTTCCATCGAATTATTGCGTTAAGCGCCAATAAC 489
|.|||||||||||.||.||.||.||.|||||.||.||.|||||.||.|||
BL01650___ycb 440 GAGAAGCGGATAAGGAATTTCACCGGATTATCGCTTTGAGCGCGAACAAC 489
BSNT_00442___ 490 CCCGTCGTTGAAGGGATGATTCAGTCCCTGTTGATCACCCATGCGAAAAT 539
||.||..||||||||||||||||.||.||.||||||||.||.||.|||||
BL01650___ycb 490 CCGGTGCTTGAAGGGATGATTCAATCGCTCTTGATCACACACGCCAAAAT 539
BSNT_00442___ 540 TGACAGCCAAATTCCGTACAGGGAGAGAGATGTAACGGTCGAATATCACA 589
.||||||||.|||||.||.|||||.||.||....||.|||||||||||.|
BL01650___ycb 540 CGACAGCCAGATTCCATATAGGGAAAGGGACCGGACTGTCGAATATCATA 589
BSNT_00442___ 590 AAAAAATCTACGACGCCCTTGCCA--AAAGAGATCCGTACAAAGCACATT 637
..||.||.|...|.|||||| || ||||.||.||.||..||||..||.
BL01650___ycb 590 CGAATATTTTGAAAGCCCTT--CAACAAAGGGACCCATATCAAGCCTATC 637
BSNT_00442___ 638 ACCACATGTATGAGCATCTGAAATTTGTCCGTGACAAAATTTTAAAAGGA 687
||||.||||||||||||.|.||||||||.||||||||||| |..||
BL01650___ycb 638 ACCATATGTATGAGCATTTAAAATTTGTACGTGACAAAAT-----ACTGA 682
BSNT_00442___ 688 ATG--------GATGAAAAA---------TAA 702
||| ||||||||| |||
BL01650___ycb 683 ATGGTCTTCGTGATGAAAAAAACAATCATTAA 714
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.