Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00469 and BL01644
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00469___tatCD.1.5803.seq
# -bsequence dna-align/BL01644___tatCD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00469___tatCD-BL01644___tatCD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00469___tatCD-BL01644___tatCD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00469___tatCD
# 2: BL01644___tatCD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity: 513/792 (64.8%)
# Similarity: 513/792 (64.8%)
# Gaps: 120/792 (15.2%)
# Score: 1652.5
#
#
#=======================================
BSNT_00469___ 1 ATGGATAAAAAA---GAAACCCATCTGATCGGGCATTTAGAAGAGCTTCG 47
|..|||||| |||||.|||.||||.|..|||.|.||||||||.||
BL01644___tat 1 ---GTGAAAAAAAGGGAAACACATTTGATTGCCCATCTTGAAGAGCTGCG 47
BSNT_00469___ 48 CCGCCGGATTATCGTCACCCT-----CGCGGCATTTTTTCTATTTCTCAT 92
||..||.||.||....||.|| || |||.||||.||||||||
BL01644___tat 48 CCAGCGAATCATTAAAACGCTTCTTACG-----TTTATTCTGTTTCTCAT 92
BSNT_00469___ 93 CA-CGGCTTTTTTGTTCGTACAGGACATTTATGACTGGCTGATCAGGGAT 141
|| |||| ||.|||||.||.||||||||.|||||||||||||||||.||.
BL01644___tat 93 CACCGGC-TTCTTGTTTGTTCAGGACATCTATGACTGGCTGATCAGAGAC 141
BSNT_00469___ 142 TTGGATGGAAAGCTGGCTGTGCTTGGGCCGAGTGAAATCCTCTGGGTGTA 191
.|.||||.||||||.|||||.||.||||||.|.||.||.||.|||||.||
BL01644___tat 142 CTTGATGAAAAGCTTGCTGTACTGGGGCCGGGGGATATTCTTTGGGTTTA 191
BSNT_00469___ 192 TATGATGCTTTCCGGCATTTGT----GCCATTGCGGCTTCTATCCCTGTT 237
|||||||.||.|.|| .|| ||.||.||.||..|.||.||.||.
BL01644___tat 192 TATGATGATTGCGGG----GGTGCTGGCGATCGCAGCCACCATACCGGTG 237
BSNT_00469___ 238 GCCGCGTACCAGCTGTGGCGTTTCGTTGCACCGGCACTGACGAA-----A 282
||.||.|..|||...|||||.||.||.||.||.||.|||||..| |
BL01644___tat 238 GCTGCTTTTCAGACATGGCGGTTTGTGGCGCCTGCGCTGACCGACCACGA 287
BSNT_00469___ 283 ACGGAGCGCAAGGTGACGCTCA----TGTACATACCAG----GTTTATTT 324
|||||| |||| .|| |.||.||.||.| |||.||||
BL01644___tat 288 ACGGAG--------GACG-GCATTATTTTATATTCCGGGGCTGTTCATTT 328
BSNT_00469___ 325 GCGTTGTTTTTGGCGGGCATCTCCTTCGGATACTTTGTCTTGTTTCCGAT 374
...||.|||| |||.||....|||||.||.|||||..|.||||||.|
BL01644___tat 329 TTTTTATTTT----GGGGATTGTATTCGGTTATTTTGTACTCTTTCCGCT 374
BSNT_00469___ 375 CGTGC-TCAGCTTTTTGACTCATT-----TATCCTCCGGCCACTTTGAAA 418
|||.| |||| ||||||| | |.|||.|||||||.|||.|||
BL01644___tat 375 CGTTCTTCAG-TTTTTGA-----TCGGCCTGTCCGCCGGCCATTTTCAAA 418
BSNT_00469___ 419 CGATGTTTACGGCTGACCGCTACTTTAGGTTTATGGTGAATTTGAGCCTG 468
|||||||||||||.||.|..||.|||.|.||||||.||||..|.|..|||
BL01644___tat 419 CGATGTTTACGGCGGAGCATTATTTTCGCTTTATGATGAACCTCACACTG 468
BSNT_00469___ 469 CCGTTCGGCTTCTTGTTTGAGATGCCCTTGGTGGTGATGTTTTTAACAAG 518
||.|||||.||.||||||||.||||||.|..|.||||||||||||||.||
BL01644___tat 469 CCATTCGGGTTTTTGTTTGAAATGCCCCTCATCGTGATGTTTTTAACGAG 518
BSNT_00469___ 519 GCTGGGCATCTTAAATCCTTACAGACTGGCCAAAGC----------GAGA 558
.||.||.||.|||||||| |||| |||| ||||
BL01644___tat 519 CCTCGGGATTTTAAATCC---------GGCC-AAGCTCAGTAAAATGAGA 558
BSNT_00469___ 559 AAGCTGTCCTATTTTCTGCTGATTGTCGTGTCCATATTGATTACACCGCC 608
||..|.||.||||||..||||||||||||.||..|..||||.||.|||||
BL01644___tat 559 AAAATTTCTTATTTTGCGCTGATTGTCGTATCGGTTGTGATCACGCCGCC 608
BSNT_00469___ 609 TGATTTTATTTCTGATTTTCTCGTGATGATCCCGCTTCTTGTCCTGTTTG 658
.|||||.||.||.|||.|.||.|||||..|||||||.|||||..|.|..|
BL01644___tat 609 CGATTTCATCTCAGATGTGCTGGTGATCGTCCCGCTCCTTGTATTATACG 658
BSNT_00469___ 659 AAGTGAGTGTCACCCTATCGGCGTTTGTCT-------------------A 689
||.||||..||.|..|||||||.|||.||| |
BL01644___tat 659 AATTGAGCATCTCTTTATCGGCATTTATCTACCGGAAAAAAACCGCCGCA 708
BSNT_00469___ 690 CAAAAAGAGGCTGAGG--GAAGAAACAGCGGCGGCCGCTTAG 729
|||.|||.|||||||| .||| |||.|
BL01644___tat 709 CAACAAGGGGCTGAGGCCCAAG--------------GCTGA- 735
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