Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00432 and BL01640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_00432.1.5803.seq
# -bsequence dna-align/BL01640___glnK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00432-BL01640___glnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00432-BL01640___glnK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00432
# 2: BL01640___glnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1437
# Identity: 941/1437 (65.5%)
# Similarity: 941/1437 (65.5%)
# Gaps: 195/1437 (13.6%)
# Score: 2864.5
#
#
#=======================================
BSNT_00432 1 ATGTTCTGGGTCAAAAGCAATTTGCAGGTTTTCTCCCGATTCCCCAAAAT 50
.||||| ||
BL01640___gln 1 -----ATGGGT---------------GG---------------------- 8
BSNT_00432 51 AAAAAGCGAGGA--TGTGATCAACATAAAACTGGAACGGTTTATTGAAAA 98
|||.||.||| .||||| .|.||||..||..|||.||.||.||||
BL01640___gln 9 --AAATCGGGGAAGCGTGAT---GACAAAAGCGGCCCGGCTTGTTAAAAA 53
BSNT_00432 99 AGACGGATATA---TATTGGCCCTGATGCTGATTACGGTGCCGCTGGCCG 145
||||||.|||| ||.||| |||||.||.|.||.|||||||||||.|
BL01640___gln 54 AGACGGCTATATCTTAATGG---TGATGATGTTAACTGTGCCGCTGGCAG 100
BSNT_00432 146 GTGAACTGAAATTTTATCCCCTCAATGAAGA-ATTCCGGGTCAGCTTTGG 194
|.||.|||||.||||||||.||.||.| ||| .|||.||||||||||.||
BL01640___gln 101 GAGAGCTGAAGTTTTATCCGCTGAACG-AGACCTTCAGGGTCAGCTTCGG 149
BSNT_00432 195 GGCACCGGTTTTTTTC-TTCTTTTTAT-CATTGTTGCGGCATGTGCCCGC 242
||..|||..|||.||| |||||||..| | ||.|||||.|||||||.||
BL01640___gln 150 GGTTCCGACTTTCTTCTTTCTTTTGCTGC--TGCTGCGGAATGTGCCGGC 197
BSNT_00432 243 TGTGCTG-CCGGGTTTTCTGACTGGAGCGGCTGTTTTCATCTTTCGCGT- 290
||||||| ||||.|||| |.||.||.|||||.||..||...|||||.||
BL01640___gln 198 TGTGCTGTCCGGCTTTT-TAACGGGGGCGGCAGTCGTCGGATTTCGTGTG 246
BSNT_00432 291 ---CTTTCTGGAATTATGGGGCGGAGGACACA-ATGGACTGACTCCGATT 336
|||..||||.|| ||||.|.|| || ||.||.||.||...||.
BL01640___gln 247 CTGCTTGATGGATTT---GGGCCGGGG---CAGATCGATTGGCTGTCATC 290
BSNT_00432 337 CTGT-------ATGATCAAGCGTCTGGCTTTTTCTTTTATATGACTTACG 379
||.| ||.||| ||.|| ||||||||||||.|.||.||.|
BL01640___gln 291 CTTTTACTACCATTATC---CGACT---TTTTTCTTTTATTTCACATATG 334
BSNT_00432 380 CCTGTCTGTTTTCCATATTAAAGGCCAATCG-TTTCCGTGAA---CGGCC 425
|.|.|||.||.|.|.|...|||.|..||.|| |||| || ||.||
BL01640___gln 335 CGTTTCTATTCTACTTGGCAAAAGTGAAACGATTTC----AATTTCGCCC 380
BSNT_00432 426 GATTATGCTCGGTTTCATTGGGTTTAT---------GATTGAAGTTGTGT 466
|||| |.|||.||||||.| .||.|||.|..|..
BL01640___gln 381 ------GCTC---TACATCGGGTTTCTCGGCTTCGGAATCGAACTGATTG 421
BSNT_00432 467 CAGATTGTGTCGAGCTGGCTGTGCAATTTCTCATTTT----TCATACGGT 512
|.|||.|.|.|||.|||||.||.||||.|.|.||.|| || |||
BL01640___gln 422 CCGATGGAGCCGAACTGGCCGTTCAATATATGATGTTCGAGTC-TAC--- 467
BSNT_00432 513 TGTCACGCCTGAGAAAATCACTGACATTGCGGTGATTGCGATTTCTCACA 562
.|||||.||.|..||||||...|||||...||.||||||..||||.||||
BL01640___gln 468 CGTCACCCCGGGAAAAATCCGCGACATGATGGCGATTGCTTTTTCCCACA 517
BSNT_00432 563 CATTTATTGTGATGAGCTTTTATAGTGTGCTGAAGCTGTATGAAACACAA 612
..|||||||||.|||||||||.||.|||..||||||||||||||||.|||
BL01640___gln 518 GCTTTATTGTGCTGAGCTTTTTTAATGTCATGAAGCTGTATGAAACGCAA 567
BSNT_00432 613 TCGAGAGAAAAACAGACAAGGCAGCAGCACGAGCACATGCTGATGATCGT 662
|||.|.|||||.||||...|..|.||..|.||||||||||||||||||||
BL01640___gln 568 TCGCGGGAAAAGCAGATCCGCGAACAAAATGAGCACATGCTGATGATCGT 617
BSNT_00432 663 TTCCAATTTATATGAAGAAACGGTGCACCTAAAAAAGACATTGAAAACGA 712
|||.||.||||||||||||||.||.||..|.||||||||.|||||.|..|
BL01640___gln 618 TTCAAACTTATATGAAGAAACCGTTCATTTGAAAAAGACGTTGAAGAATA 667
BSNT_00432 713 C---AGAGAAAGTGACAAACGATTCGTATCAGTTCTATCGGG-----AAA 754
| ||||| |.||||||||.||.||||||.|.|| |.|| |||
BL01640___gln 668 CTGAAGAGA---TTACAAACGAGTCCTATCAGCTGTA-CAGGCTCTTAAA 713
BSNT_00432 755 T-GA-AGGGC---AAGGAT------GTTCAGCTGAGC-GGCAGAA--TCC 790
| || ||.|| ||..|| ||.|.||.||.| |.||||| |.|
BL01640___gln 714 TAGACAGAGCGATAACAATTCCTCCGTCCGGCAGATCAGCCAGAAAGTGC 763
BSNT_00432 791 TGAGACTGGCCGGAGAGATTCATGAAGTGAAAAAGGACAACCAGCGGATA 840
||.|.||.|||||.||.||.|||||.||.|||||.|||||.|||||.||.
BL01640___gln 764 TGCGCCTCGCCGGTGAAATCCATGAGGTCAAAAAAGACAATCAGCGCATT 813
BSNT_00432 841 TTCGCAGGGCTTTCAAAACTGATTTCGAATGAGAGTTTGAGAGATTATAT 890
|||||.||.|||||||||.|.|||||.||.||.||.||.|||||.||.||
BL01640___gln 814 TTCGCCGGACTTTCAAAATTAATTTCCAAAGAAAGCTTCAGAGACTACAT 863
BSNT_00432 891 GAGGGCTTC---TGATTTGCTGCAGCTCGTGATTCGAATGAATGAAAAGT 937
||||.| .|||.||.|.|.|||.||||...|.||.|||..|||||
BL01640___gln 864 ---GGCTGCAGAGGATCTGGTCCGGCTTGTGACCGGCATAAATCGAAAGT 910
BSNT_00432 938 ACGCTGAAGCACTAGGGAAGCAGATTGATTTTTACTGCTCGATCGAGGGA 987
|.||||||.|.||.|..||..|.|||||.|||.|.|..|||||.||.|||
BL01640___gln 911 ATGCTGAATCGCTCGAAAAAGACATTGACTTTCATTATTCGATAGACGGA 960
BSNT_00432 988 GAGCAT--GACGAATATCACGTATTTATCGTGCTTTCGATCATTAATAAT 1035
||.||| || ||||.||.||.|.||.|||..|.||..|.|||||||||
BL01640___gln 961 GAACATCCGA--AATACCATGTGTATACCGTATTATCCGTAATTAATAAT 1008
BSNT_00432 1036 CTAACAGCAAATGCGGTAGAGGCTATGGATGAAGAGGGAATGG-----TC 1080
.|.|..||.||.|||||.||.||.|| |.||.| |.|.|| ||
BL01640___gln 1009 ATTATGGCGAACGCGGTGGAAGCGAT---TCAAAA--GCAGGGCTCCATC 1053
BSNT_00432 1081 AGCCTGAGGCTCCGTAAGC----CAAATGAGAGTATGGTAGAATTCCAGG 1126
||.||.||.|||..||.|| | .|||| .|||.|.||||.||..|
BL01640___gln 1054 AGACTCAGCCTCTATAGGCGCGGC-GATGA---CATGCTGGAATGCCGCG 1099
BSNT_00432 1127 TGGAAGACAATGGCCCCGGGATTTCCGAGAAAATCGGAGACATTGTGTTT 1176
|||||||..|.||.||.||.|||.||||||||.|||||||..|.||||||
BL01640___gln 1100 TGGAAGATGACGGACCGGGCATTCCCGAGAAAGTCGGAGATGTGGTGTTT 1149
BSNT_00432 1177 GACCCGGGCTTTACTTCAAAATATGACGAATTTGGCACGCCTTCTACGGG 1226
||.|||||.|..||.|||||||||||.|||||.||.||.|||||.||.||
BL01640___gln 1150 GAGCCGGGATACACGTCAAAATATGATGAATTCGGAACTCCTTCAACCGG 1199
BSNT_00432 1227 TATCGGACTTTCCTACGTAAAGGAAA---TCGTGACTGAGCTAGAAGGGG 1273
.|||||.||.||.||.||.||||||| |||.| |||||.|.||||
BL01640___gln 1200 AATCGGTCTGTCTTATGTGAAGGAAACTGTCGAG---GAGCTTGGAGGG- 1245
BSNT_00432 1274 ATATCACGTTTGAT-----AATCA-GC-AGCGGGGAGTGGTGTTTGCCAT 1316
|.|| ||.||| |||.| || ||| ||.||.||||||.|.||
BL01640___gln 1246 --AGCA--TTCGATTCCGGAATGATGCAAGC--GGTGTTGTGTTTACGAT 1289
BSNT_00432 1317 CAGGCTGCCTGTCCGGCATTTGATTCAGAAAGGGTGA 1353
|||.||.||.||.|..||.||||||||||||||||||
BL01640___gln 1290 CAGACTTCCGGTTCAACAATTGATTCAGAAAGGGTGA 1326
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