Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02436 and BL01634
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02436___speA.1.5803.seq
# -bsequence dna-align/BL01634___speA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02436___speA-BL01634___speA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02436___speA-BL01634___speA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02436___speA
# 2: BL01634___speA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1533
# Identity: 1098/1533 (71.6%)
# Similarity: 1098/1533 (71.6%)
# Gaps: 102/1533 ( 6.7%)
# Score: 3926.0
#
#
#=======================================
BSNT_02436___ 1 ------------------TTGTCGCAACATGAAACACCCTTATACACAGG 32
||||.|||.||.|||||||||.||||.||.||
BL01634___spe 1 ATGAAGGTGGGAAAACAATTGTTGCAGCACGAAACACCCCTATATACCGG 50
BSNT_02436___ 33 ACTGAAAAAGCATGCAAGCAGACAGCCTGTTCAATTCCACATTCCCGGCC 82
|.|.|||||.||.||..|||.|.|.||..|.||.|||||.||.||.||.|
BL01634___spe 51 ATTAAAAAAACACGCCGGCAAAAACCCGATCCAGTTCCATATACCGGGGC 100
BSNT_02436___ 83 ATAAAAAAGGGGCAGGAATGGACCCAGAATTCAGACAATTTATCGGTGAA 132
|.||||||||..|.||.||||||||.||||||||..|.||||||||.|||
BL01634___spe 101 ACAAAAAAGGCTCTGGGATGGACCCTGAATTCAGGGAGTTTATCGGAGAA 150
BSNT_02436___ 133 AACGCGTTAAGCATAGATTTAATTAATATTGAACCATTAGACGATCTGCA 182
||.||.|||||||||||||||||.||.||.||.||..|.|||||||||||
BL01634___spe 151 AATGCATTAAGCATAGATTTAATCAACATCGAGCCTCTCGACGATCTGCA 200
BSNT_02436___ 183 CGCGCCAAAAGGCATTATTAAACAAGCACAAGATCTGGCTGCTGAAGCAT 232
||||||.|||||.||.||.|||||.||.||.||||||||.||||||||||
BL01634___spe 201 CGCGCCGAAAGGAATAATCAAACAGGCGCAGGATCTGGCGGCTGAAGCAT 250
BSNT_02436___ 233 TTGGAGCGGATCATACATTTTTTTCTGTTCAAGGAACAAGCGGCGCCATT 282
|.|||||.||..|.||.||.|||||.||.||.|||||.|||||||||||.
BL01634___spe 251 TCGGAGCCGACTACACGTTCTTTTCCGTCCAGGGAACGAGCGGCGCCATC 300
BSNT_02436___ 283 ATGACAATGGTAATGGCTGTTTGCGGACCTGGTGATAAAATTATTATTCC 332
|||||.|||||.|||||.||.||||||||.||.||.|||||.||..|.||
BL01634___spe 301 ATGACGATGGTCATGGCCGTATGCGGACCCGGAGACAAAATCATCGTCCC 350
BSNT_02436___ 333 AAGAAATGTTCATAAATCAATTATGACAGCTATTGTATTTTCCGGAGCGG 382
.|||||||||||||||||..|.|||.||||.||.||.||.||.||.||.|
BL01634___spe 351 GAGAAATGTTCATAAATCGGTGATGTCAGCGATCGTCTTCTCAGGCGCCG 400
BSNT_02436___ 383 TTCCAATTTTTATTCATCCTGAAATTGACAATGAATTGGGCATCTCCCAC 432
|.||.||.||.||.|||||.|||||.|||.||||..||||.||.||.|||
BL01634___spe 401 TACCGATCTTCATCCATCCGGAAATCGACGATGAGCTGGGGATTTCACAC 450
BSNT_02436___ 433 GGCATTACACTTGAATCTGCTAAACGGGCGCTTACCGAACATCCGGATGC 482
||.||.||.|.||||||.||.|||...|||||....||.|||||.||.||
BL01634___spe 451 GGGATCACCCCTGAATCAGCGAAAAAAGCGCTGCTTGAGCATCCTGACGC 500
BSNT_02436___ 483 AAAAGGGCTTCTCGTCATCAACCCGACATATTTCGGTGTTGCAGCCGACT 532
||||||.||.|||||||||||||||||.||||||||..|.||.||.||||
BL01634___spe 501 AAAAGGACTGCTCGTCATCAACCCGACTTATTTCGGCATAGCTGCAGACT 550
BSNT_02436___ 533 TAAAAAGCATCGTAGAACTCGCTCATTCGTTTGATGTGCCAGTGCTTGTC 582
|||||||||||||.||.||.||||||||.|||.||||.||.|||||.||.
BL01634___spe 551 TAAAAAGCATCGTCGAGCTGGCTCATTCTTTTCATGTCCCGGTGCTAGTT 600
BSNT_02436___ 583 GATGAAGCACACGGCGTTCACATTCATTTTCACGACGAATTGCCGCTATC 632
||.||.||.|||||||||||.||.||.||.||.||.||..||||.||.||
BL01634___spe 601 GACGAGGCGCACGGCGTTCATATCCACTTCCATGAAGATCTGCCTCTTTC 650
BSNT_02436___ 633 GGCTATGCAGGCAGGAGCGGACATAGCAGCGACAAGTGTACACAAGCTGG 682
|||.||||||||.||||||||.||.||.|||||.||.||.||.|||||.|
BL01634___spe 651 GGCAATGCAGGCCGGAGCGGATATGGCGGCGACGAGCGTTCATAAGCTCG 700
BSNT_02436___ 683 GCGGATCACTCACGCAAAGTTCGATTTTAAACATGAGAGAGGGCCTTGTA 732
|.|||||.||.||.||||||||||||.|.||.||||.|||.||.||.||.
BL01634___spe 701 GAGGATCCCTTACACAAAGTTCGATTCTCAATATGAAAGAAGGTCTGGTT 750
BSNT_02436___ 733 TCAAAAGACAGAGTGCAATCAATACTGAGCATGCTGACAACTACGTCAAC 782
|||||.||.||.||||||||.||..|.|||||||||||.||.||.||.||
BL01634___spe 751 TCAAAGGAAAGGGTGCAATCGATTTTAAGCATGCTGACGACGACATCGAC 800
BSNT_02436___ 783 TTC-------TTACTTGCTTCTTGCTTCTTTGGATGTTGCCAGAAAACGC 825
.|| ||.||.||||| |||| |||||.||||||||||||
BL01634___spe 801 CTCCTATCTATTGCTCGCTTC--GCTT-----GATGTCGCCAGAAAACGC 843
BSNT_02436___ 826 CTTGCAACAGAAGGCCACCAGCTTGCT-GAGGAAACACTAAAGCTTGCCA 874
.|.||.|||||.||.|||.|.| ||.| ||..||||..|.|||||.||||
BL01634___spe 844 TTAGCCACAGAGGGACACGAAC-TGATCGAACAAACGATTAAGCTCGCCA 892
BSNT_02436___ 875 ATCAGACGAGAGATCGCCTCAACCAGATTGAAGGCATTTATTGTGTCGGT 924
|..|.||.||.||.|||.||||..|.||..|.||.||||..||.|||||
BL01634___spe 893 ACGAAACAAGGGAACGCATCAATAATATCAACGGGATTTCATGCGTCGG- 941
BSNT_02436___ 925 TCTGAG----ATTCTTGGGTCGAAAGCAGCTTACAGCTATGATCCGACAA 970
||| ||.||.||.||.|||||.||||....||||||||||||.|
BL01634___spe 942 ---GAGGGAAATCCTCGGCTCCAAAGCGGCTTTTGACTATGATCCGACCA 988
BSNT_02436___ 971 AATTGATTATCTCTGTGAAAAGTCTTGGCCTGACAGGACATGACGTGGAA 1020
|||||||.||.|||||||||...||.||||||||.||.|||||.||||||
BL01634___spe 989 AATTGATCATATCTGTGAAAGACCTCGGCCTGACCGGTCATGATGTGGAA 1038
BSNT_02436___ 1021 AAATGGCTTCGTGAATCCTTTAATATTGAGGTTGAGCTTTCTGATCTGTA 1070
||||||||.||.||.||.|...|.||.||.||.|||||||||||..|.||
BL01634___spe 1039 AAATGGCTGCGCGAGTCATGCCAAATCGAAGTGGAGCTTTCTGACTTATA 1088
BSNT_02436___ 1071 CAATATTTTGTGTATTTTCACTCCTGGTGACAGCCAAAATGATGCAGACC 1120
|||.||..||||.|||||.||.||.||.|||.|..||.|.||||||||
BL01634___spe 1089 CAACATCCTGTGCATTTTTACACCGGGAGACCGGAAAGAGGATGCAGA-- 1136
BSNT_02436___ 1121 GGCTTG-------TAGAGGCTTTAACTGAGATCGC---ACAG-------C 1153
|| ||.||| .|||||.|||||.|| |||| |
BL01634___spe 1137 ----TGCGTTAATTAAAGG-ATTAACCGAGATTGCTCAACAGGCCGCTTC 1181
BSNT_02436___ 1154 AAATGTCAGAACAAGATGTAACACATCAGCAA-ACTGAGGTTCTGCTTCC 1202
|..|| |.||| ||||.| .|||| .||||.||.||.||.||
BL01634___spe 1182 ATCTG-CGGAA--------AACAGA--CGCAAGCCTGAAGTGCTTCTGCC 1220
BSNT_02436___ 1203 AGAAATAC-----CTTTATTGGCAATGACTCCGCGTGATGCTTTCTATGC 1247
|.|.||.| ||| ||.|||||.||||||||.|||||.||.||
BL01634___spe 1221 AAACATTCCGGCGCTT-----GCGATGACACCGCGTGACGCTTTTTACGC 1265
BSNT_02436___ 1248 AAATACGGAAGTCATCCCATTAAAAGAAGCATCCGGACGGATTATTGCTG 1297
|||.|||||..||||.||.||.|||.|||||.|.||..|.||.|||||.|
BL01634___spe 1266 AAACACGGAGATCATTCCGTTCAAAAAAGCAGCTGGCAGAATGATTGCCG 1315
BSNT_02436___ 1298 AATTTGTCATGGTATATCCGCCTGGTATTCCAATCTTCATCCCAGGAGAA 1347
|.|||||.|||||.||||||||.||.||.||.||||||||.||.||.||.
BL01634___spe 1316 AGTTTGTTATGGTTTATCCGCCAGGGATACCGATCTTCATTCCGGGCGAG 1365
BSNT_02436___ 1348 ATTATTACAGAAGAAAACATCAGCTACATTTTTAAAAACCTTGACGCAGG 1397
||.|||||.||.||.||.||||.||||||....||.|||||.||.||.||
BL01634___spe 1366 ATCATTACCGAGGATAATATCAACTACATCGAAAAGAACCTGGAAGCTGG 1415
BSNT_02436___ 1398 CCTCCCTGTTCAAGGACCTGAGGA-------CTCGACTTTACATATGATC 1440
.||.||||||||.|||||.||.|| ||| |||||||||
BL01634___spe 1416 GCTGCCTGTTCAGGGACCGGAAGATGACACCCTC-------CATATGATC 1458
BSNT_02436___ 1441 CGAGTCATCAAAGAACAAAAAGCAATTCAATAA 1473
||.||.||.||||||||..|.|||||.|..|||
BL01634___spe 1459 CGCGTTATTAAAGAACAGCAGGCAATCCTGTAA 1491
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