Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02434 and BL01633
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02434___slp.1.5803.seq
# -bsequence dna-align/BL01633___slp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02434___slp-BL01633___slp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02434___slp-BL01633___slp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02434___slp
# 2: BL01633___slp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 428
# Identity: 244/428 (57.0%)
# Similarity: 244/428 (57.0%)
# Gaps: 103/428 (24.1%)
# Score: 588.0
#
#
#=======================================
BSNT_02434___ 1 ATGCGATATCGCGCGGTATTCCCCATGCTGATAATAGTATTTGCTTTAT- 49
|||.|.|.|||.|||.|||||.|| ||.|..|.| |.|||.||||.|
BL01633___slp 1 ATGTGGTTTCGAGCGATATTCACC--GCCGCAATT--TGTTTCCTTTTTT 46
BSNT_02434___ 50 ---CG---GGCTGTACGCTTTC-CACCATCAATCCGATGAAAAAAAGCCG 92
|| ||.|||.|..|.|| || |||||..|| || |..|||.|
BL01633___slp 47 TGACGAGTGGATGTTCTTTATCTCA-CATCATGCC--TG---ACCAGCAG 90
BSNT_02434___ 93 GATTGA--CAACATTCA--------TCATACACAAATCCTGTTTTTTTCT 132
.||..| ||.||.||| ||| |..||.|.||||||||.
BL01633___slp 91 CATCAAAGCACCAATCACCGCCACCTCA-----AGCTCATCTTTTTTTCC 135
BSNT_02434___ 133 GATGAGAACCAAATAGACCAGGAAGCGCCTTATTACGATGCACTGCTTGA 182
|||||..|.||.||.||.|||||||.|.|||||||.|||||.||..|.||
BL01633___slp 136 GATGACGAGCATATGGAGCAGGAAGTGGCTTATTATGATGCGCTTTTGGA 185
BSNT_02434___ 183 TTTAGAAAAAGATTATCCCGA-------GCAAATAGATAAAATGAAGGTC 225
||||.|||||||.|.|||||| .|||.||...|||.| ||
BL01633___slp 186 TTTAAAAAAAGAATTTCCCGAACAGGTTTCAAGTATGGAAATT-----TC 230
BSNT_02434___ 226 -TATGATAAAAAAGAAGGC---TGGGAAGATGAGATTGAAACTGTC---C 268
.|||||| ||||| |||.||.|.|||.||.|| ||| |
BL01633___slp 231 ACATGATA------AAGGCGAGTGGAAAAAAGAGGTTAAA---GTCTTTC 271
BSNT_02434___ 269 CTACCCTTATGGTTGT---TGATCAGCGCCATGTCGTGGTGAAAATCGAG 315
|.|.|.|..||.|||| ||||.|| .|.||..||||.|||||.||.
BL01633___slp 272 CAAGCTTGCTGCTTGTTAATGATAAG---AAAGTACTGGTTAAAATTGAA 318
BSNT_02434___ 316 GGATGTGTGAAAAAGAAAG---AAGACATCATTAAACCAT--TACAGCAT 360
||| ||||..|||| |||| |||| || ||..||.|
BL01633___slp 319 GGA------AAAATAAAAGATAAAGA------TAAA--ATTGTAAGGCTT 354
BSNT_02434___ 361 GTGCTGTCAAAA-------------TAA 375
.| |||||| |||
BL01633___slp 355 CT----TCAAAAGGAATTGAAACATTAA 378
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