Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02423 and BL01629

See Amino acid alignment / Visit BSNT_02423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence dna-align/BSNT_02423___def.1.5803.seq
#    -bsequence dna-align/BL01629___def.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02423___def-BL01629___def.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02423___def-BL01629___def.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02423___def
# 2: BL01629___def
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 562
# Identity:     435/562 (77.4%)
# Similarity:   435/562 (77.4%)
# Gaps:          14/562 ( 2.5%)
# Score: 1659.0
# 
#
#=======================================

BSNT_02423___      1 TTGATTACTATGGAAAACATCGTACGTGACGGCCATCCAGCCCTCAGAGA     50
                     |||||.||.|||||||||||.||.||.|||||.|||||.||..|.|||  
BL01629___def      1 TTGATCACAATGGAAAACATTGTCCGCGACGGTCATCCTGCTTTGAGA--     48

BSNT_02423___     51 GAC---TGCCGAACCTGTTGAGCTGCCTCCAACTGATGCAGAAAAACAGC     97
                      ||   .||||||...|||.|..||||..|||..||.|.|||||...|.|
BL01629___def     49 -ACCGTCGCCGAAGAAGTTCAATTGCCAGCAAGCGAAGAAGAAATCAAAC     97

BSNT_02423___     98 AGCTGGCCGACATGATCGAATTTGTTAAAAACAGCCAAAATCCGGAATTA    147
                     |||||..|||.||||||||.|||||.|||||||||||..|.||.|||.|.
BL01629___def     98 AGCTGAGCGAAATGATCGAGTTTGTCAAAAACAGCCAGGACCCCGAAATC    147

BSNT_02423___    148 GCCGAAAAATACAAGCTGCGCCCTGGCGTAGGACTCGCAGCTCCTCAAAT    197
                     ||..||||.|||||.||.||.|||||.||.||.||.||.|||||.|||||
BL01629___def    148 GCTAAAAAGTACAACCTTCGTCCTGGTGTCGGTCTAGCCGCTCCGCAAAT    197

BSNT_02423___    198 TAATATCAAAAAACGAATGATCGCCGTTCATGCGGAA---GATGCTTCCG    244
                     |||||||||.|||||||||||||||||||||||.|||   ||.|   .||
BL01629___def    198 TAATATCAATAAACGAATGATCGCCGTTCATGCCGAAAGCGAAG---ACG    244

BSNT_02423___    245 GTAAATTATACAGCTATGCTCTGTTTAATCCTAAGATCGTCAGCCATTCA    294
                     |.|.|.|||||||||||||.||.||.|||||.||||||||||||||.||.
BL01629___def    245 GGACACTATACAGCTATGCGCTTTTCAATCCGAAGATCGTCAGCCACTCT    294

BSNT_02423___    295 GTTGAAAAAAGCTACTTAACAAGCGGCGAGGGCTGCCTCTCTGTGGATGA    344
                     |||.|||.|.||||.||.||||||||||||||||||||.||.||.||.||
BL01629___def    295 GTTCAAAGATGCTATTTGACAAGCGGCGAGGGCTGCCTGTCCGTCGACGA    344

BSNT_02423___    345 AGCGATTCCCGGTTATGTTCCCCGCTATGCTCGCATCAGAGTAAAAGGAA    394
                     ..||||||||||.||||||||.|||||||..||.|||.||||.|||||||
BL01629___def    345 GCCGATTCCCGGATATGTTCCGCGCTATGAACGGATCCGAGTCAAAGGAA    394

BSNT_02423___    395 CAACACTAGAAGGCGAAAATATTGATATTCGTTTAAAAGGATTTCCGGCT    444
                     |.||.||.|||||||||||.||.||.||.||.||||||||||.||||||.
BL01629___def    395 CGACGCTTGAAGGCGAAAACATCGACATCCGCTTAAAAGGATATCCGGCG    444

BSNT_02423___    445 ATTGTGTTTCAGCATGAGATCGATCATTTGAACGGCGTTATGTTCTATGA    494
                     ||.||.||.|||||||||||||||||||||||||||.|||||||.||.||
BL01629___def    445 ATCGTATTCCAGCATGAGATCGATCATTTGAACGGCATTATGTTTTACGA    494

BSNT_02423___    495 TCATATTGATAAGGAAAATCCTTTCAAAGAACCTGAAAATGCAATCGCAA    544
                     .||.||.||.||.|||||.||..|.|||.||||||||||||||| |||..
BL01629___def    495 CCACATCGACAAAGAAAACCCGCTGAAACAACCTGAAAATGCAA-CGCCT    543

BSNT_02423___    545 TTGAGC-GCTAA    555
                     .|..|| |.|||
BL01629___def    544 GTAGGCAGGTAA    555


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