Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02420 and BL01628

See Amino acid alignment / Visit BSNT_02420 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence dna-align/BSNT_02420___ykzG.1.5803.seq
#    -bsequence dna-align/BL01628___ykzG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02420___ykzG-BL01628___ykzG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02420___ykzG-BL01628___ykzG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02420___ykzG
# 2: BL01628___ykzG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity:     172/214 (80.4%)
# Similarity:   172/214 (80.4%)
# Gaps:           8/214 ( 3.7%)
# Score: 672.5
# 
#
#=======================================

BSNT_02420___      1 ATGATTTATAAGGTATTTTATCAAG--AG-AAGGCTGACGAAGTACCTGT     47
                     |||||.|||||||||||||||||||  || ||   |||||||||||||||
BL01628___ykz      1 ATGATCTATAAGGTATTTTATCAAGCAAGCAA---TGACGAAGTACCTGT     47

BSNT_02420___     48 TCGGGAAAAGACAGATTCACTTTATATTGAAGGCGTATCTGAGCGTGACG     97
                     |||.|||||.|||||||||.|||.|.|.||||....||||||.|||||.|
BL01628___ykz     48 TCGTGAAAAAACAGATTCAATTTTTGTGGAAGCTCAATCTGAACGTGAAG     97

BSNT_02420___     98 TCAGAACAAAGCTGAAAGAAAAGAAATTTAATATTGAGTTTATTACA-CC    146
                     |||||.|.||..|.|||..|.|.||.|..||||||||||||| |||| |.
BL01628___ykz     98 TCAGATCTAAATTAAAACCATACAACTACAATATTGAGTTTA-TACAGCA    146

BSNT_02420___    147 TGTTGATGGTGCATTCTTAGAATATGAACAACAGAGCGAAAATTTTAAAG    196
                     .|||||.||.||.||.||||||||||||.|.||.||||||||||||||||
BL01628___ykz    147 AGTTGAAGGCGCTTTTTTAGAATATGAAAAGCAAAGCGAAAATTTTAAAG    196

BSNT_02420___    197 TATTGGAGTTATGA    210
                     ||||||||||||||
BL01628___ykz    197 TATTGGAGTTATGA    210


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