Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02419 and BL01626
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02419___ykqC.1.5803.seq
# -bsequence dna-align/BL01626___ykqC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02419___ykqC-BL01626___ykqC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02419___ykqC-BL01626___ykqC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02419___ykqC
# 2: BL01626___ykqC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1680
# Identity: 1340/1680 (79.8%)
# Similarity: 1340/1680 (79.8%)
# Gaps: 24/1680 ( 1.4%)
# Score: 5300.5
#
#
#=======================================
BSNT_02419___ 1 ATGAAATTTGTAAAAAATGATCAGACTGCTGTTTTCGCCCTCGGAGG-TT 49
|||||||||||.||||||||.||.||.|||||.||.|||||.||||| .|
BL01626___ykq 1 ATGAAATTTGTTAAAAATGACCAAACGGCTGTATTTGCCCTTGGAGGACT 50
BSNT_02419___ 50 TGGGCGAAATCGGTAAAAATACGTACGCGGTGCAATTCCAGGATGAAATT 99
|||| ||||||||.|||||.|||||||.|||.||.||||||||.||.||.
BL01626___ykq 51 TGGG-GAAATCGGCAAAAACACGTACGGGGTCCAGTTCCAGGACGAGATC 99
BSNT_02419___ 100 GTACTGATTGATGCGGGGATCAAGTTTCCCGAGGACGAACTGCTCGGAAT 149
||.||.||.|||||||||||.||||||||.||.|||||.||.||||||||
BL01626___ykq 100 GTGCTCATCGATGCGGGGATTAAGTTTCCGGAAGACGAGCTTCTCGGAAT 149
BSNT_02419___ 150 TGACTACGTCATCCCTGATTATACGTATTTAGTCAAAAACGAAGATAAAA 199
.|||||.|||||||||||.||.||.||||||||||||||||||||.||||
BL01626___ykq 150 CGACTATGTCATCCCTGACTACACTTATTTAGTCAAAAACGAAGAAAAAA 199
BSNT_02419___ 200 TTAAAGGGCTTTTTATCACCCACGGGCACGAAGACCACATCGGCGGTATT 249
|.|||||.||||||||.||.|||||.||||||||||||||||||||.|||
BL01626___ykq 200 TCAAAGGTCTTTTTATTACGCACGGACACGAAGACCACATCGGCGGAATT 249
BSNT_02419___ 250 CCATACCTGCTTAGACAAGTGAATATTCCTGTATACGGCGGAAAACTCGC 299
||.||||||||.|.|||.|||||.|||||.||.|||||||||.|.|||||
BL01626___ykq 250 CCGTACCTGCTCAAACAGGTGAACATTCCGGTTTACGGCGGACAGCTCGC 299
BSNT_02419___ 300 GATCGGCTTACTTCGGAATAAACTTGAAGAGCATGGATTATTAAGACAGA 349
.||||||.|.||..||||.||.|||||||||||.||.||..|..|.||.|
BL01626___ykq 300 CATCGGCCTTCTCAGGAAGAAGCTTGAAGAGCACGGTTTGCTTCGCCAAA 349
BSNT_02419___ 350 CGAAACTGAACATTATCGGCGAGGATGATATTGTAAAGTTCCGCAAAACG 399
|.||.||..|.||.||.|..||.||.|||||.||.||.|||.|.||||||
BL01626___ykq 350 CAAAGCTTCATATCATTGAAGAAGACGATATCGTCAAATTCAGAAAAACG 399
BSNT_02419___ 400 GCTGTGTCATTCTTCAGAACAACACACAGTATTCCGGATTCCTACGGCAT 449
.|.||.||.||.|||||.||.||.|||||.||||||||.||.|||||.||
BL01626___ykq 400 TCGGTTTCTTTTTTCAGGACGACCCACAGCATTCCGGACTCATACGGGAT 449
BSNT_02419___ 450 TGTTGTAAAAACGCCGCCCGGAAACATCGTACATACTGGGGATTTTAAAT 499
|||.||||||||.||||..|||||||||||||||||.||.||.|||||||
BL01626___ykq 450 TGTCGTAAAAACACCGCAAGGAAACATCGTACATACCGGTGACTTTAAAT 499
BSNT_02419___ 500 TCGACTTTACTCCAGTCGGCGAGCCGGCAAACTTAACGAAAATGGCCGAA 549
||||.|||||.||.||.|||||.||.||.|||||.||.||.|||||||||
BL01626___ykq 500 TCGATTTTACACCGGTGGGCGAACCCGCCAACTTGACAAAGATGGCCGAA 549
BSNT_02419___ 550 ATCGGTAAAGAAGGCGTTTTGTGCCTTCTTTCAGACAGCACAAACAGTGA 599
|||||.|||||||||||..|.|||||.||.||||||||||||||||||||
BL01626___ykq 550 ATCGGAAAAGAAGGCGTGCTTTGCCTGCTGTCAGACAGCACAAACAGTGA 599
BSNT_02419___ 600 AAATCCGGAGTTTACCATGTCTGAGCGCCGTGTAGGAGAAAGCATTCATG 649
||..||.||.||.||.|||||.||||||...||.||||||||||||.|||
BL01626___ykq 600 AATCCCTGATTTCACGATGTCAGAGCGCAAAGTCGGAGAAAGCATTGATG 649
BSNT_02419___ 650 ACATTTTCCGCAAGGTGGACGGCCGAATTATCTTCGCTACATTTGCGTCG 699
|.||||||||.||.||.||.|||||.||.||||||||.||.||||||||.
BL01626___ykq 650 ATATTTTCCGAAAAGTCGAAGGCCGGATCATCTTCGCAACCTTTGCGTCA 699
BSNT_02419___ 700 AATATTCACCGCTTGCAGCAGGTAATTGAAGCTGCTGTACAAAATGGAAG 749
||.||.||||||.||||||||||.||.|||||.|||||...|||.|||.|
BL01626___ykq 700 AACATCCACCGCCTGCAGCAGGTGATCGAAGCGGCTGTTGCAAACGGACG 749
BSNT_02419___ 750 AAAAGTTGCCGTATTTGGACGCAGTATGGAATCGGCTATCGAAATTGGAC 799
.||.||||||||||||||.||.||.|||||.|||||.||||||||.||.|
BL01626___ykq 750 GAAGGTTGCCGTATTTGGGCGAAGCATGGAGTCGGCGATCGAAATCGGCC 799
BSNT_02419___ 800 AGACACTCGGTTATATTAACTGTCCTAAAAATACGTTTATTG-AGCATAA 848
|.||.|||||.||||||||.|||||.|||||.||.||..||| ||| .||
BL01626___ykq 800 AAACGCTCGGATATATTAAGTGTCCGAAAAACACTTTCGTTGAAGC-GAA 848
BSNT_02419___ 849 CGAAATCAATCGTATACCTGCTAATAAAGTAACAATTTTATGTACAGGAA 898
.||||||||..|..|.|||||....|||||.||.|||.|.|||||.||||
BL01626___ykq 849 TGAAATCAACAGGCTCCCTGCCGGGAAAGTGACGATTCTCTGTACCGGAA 898
BSNT_02419___ 899 GCCAAGGGGAACCAATGGCGGCGTTATCAAGAATTGCAAACGGCACACAC 948
|||||||.|||||.|||||.||..||||..||||||||||||||||||||
BL01626___ykq 899 GCCAAGGCGAACCGATGGCTGCTCTATCTCGAATTGCAAACGGCACACAC 948
BSNT_02419___ 949 CGCCAAATTTCAATCAATCCTGGGGATACAGTCGTATTTTCTTCATCCCC 998
||.|||||.||.||||||||.||||||||.|||||||||||.|||||.||
BL01626___ykq 949 CGGCAAATCTCCATCAATCCCGGGGATACGGTCGTATTTTCATCATCTCC 998
BSNT_02419___ 999 TATCCCAGGCAACACAATCAGCGTGAGTCGAACAATCAACCAGCTGTATC 1048
.|||||.|||||.||.||||||||.||.||.||.||.||||||||.||.|
BL01626___ykq 999 GATCCCGGGCAATACGATCAGCGTCAGCCGCACGATTAACCAGCTTTACC 1048
BSNT_02419___ 1049 GTGCGGGTGCTGAGGTTATTCATGGCCCTCT---TAACGATATCCATACA 1095
|.||||||||.||.||.||.||.||..||.| |||| ||.||.||.
BL01626___ykq 1049 GGGCGGGTGCCGATGTCATCCACGGAGCTGTGACTAAC---ATTCACACC 1095
BSNT_02419___ 1096 TCCGGTCACGGCGGACAGGAAGAACAGAAGCTGATGCTTCGTTTAATCAA 1145
||.||.|||||||||||||||||.||.||.||||||||.||..|.|||||
BL01626___ykq 1096 TCGGGACACGGCGGACAGGAAGAGCAAAAACTGATGCTCCGCCTCATCAA 1145
BSNT_02419___ 1146 ACCTAAATTCTTCATGCCGATTCACGGTGAGTACAGAATGCAAAAGATGC 1195
.||.||.||.||||||||||||||||||||.|||||||||||.||.||||
BL01626___ykq 1146 GCCAAAGTTTTTCATGCCGATTCACGGTGAATACAGAATGCAGAAAATGC 1195
BSNT_02419___ 1196 ATGTCAAACTTGCAACAGATTGTGGCATCCCAGAGGAAAACTGCTTTATC 1245
||||||||||.||.|||||.||.||.||.||.|||||||||||||||||.
BL01626___ykq 1196 ATGTCAAACTGGCGACAGACTGCGGAATTCCTGAGGAAAACTGCTTTATT 1245
BSNT_02419___ 1246 ATGGATAATGGTGAAGTATTAGC--GCTT--AAAGGCGACGAGGCTTCAG 1291
|||||.||.||.||||| || |||| |.|.||||.||.||.||||
BL01626___ykq 1246 ATGGACAACGGGGAAGT----GCTTGCTTTGACAAGCGAAGAAGCCTCAG 1291
BSNT_02419___ 1292 TTGCAGGAAAAATCCCGTCCGGTTCA--GTGTACATTGACGGAAGCGGTA 1339
||||.||.|||||||||||.|| || ||.||.||||||||||||||.|
BL01626___ykq 1292 TTGCGGGTAAAATCCCGTCAGG--CAATGTTTATATTGACGGAAGCGGCA 1339
BSNT_02419___ 1340 TCGGTGATATTGGCAATATCGTACTTCGTGATCGCAGAATTCTCTCTGAA 1389
||||.||.||.|||||||||||.|||||.||.|||.|.|||||.||.|||
BL01626___ykq 1340 TCGGCGACATCGGCAATATCGTGCTTCGCGACCGCCGGATTCTTTCCGAA 1389
BSNT_02419___ 1390 GAAGGACTTGTCATCGTTGTTGTCAGCATTGACATGGACGACTTCAAGAT 1439
|||||.||.|||||.||.|||||||||||..|||||.|.||.|||||..|
BL01626___ykq 1390 GAAGGGCTCGTCATTGTCGTTGTCAGCATCAACATGAAAGAATTCAAAGT 1439
BSNT_02419___ 1440 TTCAGCGGGTCCAGATTTGATTTCCAGAGGATTTGTGTACATGAGAGAAT 1489
.||.||.||.||.||.||.|||||||||||||||||.||.||||||||||
BL01626___ykq 1440 GTCCGCAGGGCCTGACTTAATTTCCAGAGGATTTGTCTATATGAGAGAAT 1489
BSNT_02419___ 1490 CTGGCGACTTGATCAACGACGCTCAAGAGCTCATTTCAAATCA-CTTACA 1538
|.||.||.||.|||||.||.||.||.||.||.|||.||...|| |||| |
BL01626___ykq 1490 CCGGTGATTTAATCAATGATGCCCAGGAACTGATTGCAGGACACCTTA-A 1538
BSNT_02419___ 1539 AAAAGTAATGGAACGAAAAACGACTCAATGGTCTGAAATCAAAAACGAGA 1588
||||||.|||||.||.||||||||.||.|||||||||||.||.|||||||
BL01626___ykq 1539 AAAAGTGATGGAGCGCAAAACGACACAGTGGTCTGAAATTAAGAACGAGA 1588
BSNT_02419___ 1589 TTACAGACACTCTTGCGCCTTTCTTGTACGAAAAAACAAAGCGCCGTCCT 1638
||||||||||.|||||.||||||.|.||.|||||||||||.|||||.||.
BL01626___ykq 1589 TTACAGACACGCTTGCTCCTTTCCTCTATGAAAAAACAAAACGCCGGCCG 1638
BSNT_02419___ 1639 ATGATCCTGCCGATCATTATGGAGGTTTAA 1668
||||||||.|||||.||||||||.||.|||
BL01626___ykq 1639 ATGATCCTTCCGATTATTATGGAAGTCTAA 1668
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