Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02409 and BL01623
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence dna-align/BSNT_02409___ampS.1.5803.seq
# -bsequence dna-align/BL01623___ampS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02409___ampS-BL01623___ampS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02409___ampS-BL01623___ampS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02409___ampS
# 2: BL01623___ampS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1253
# Identity: 924/1253 (73.7%)
# Similarity: 924/1253 (73.7%)
# Gaps: 40/1253 ( 3.2%)
# Score: 3187.5
#
#
#=======================================
BSNT_02409___ 1 ATGGATTCATTTTCACAGAAATTAAATACATATGCACAGCTGGCGGTAGA 50
|||.||||.|||.|..|.|||.|.|..|.|||||||.||||.|.||..||
BL01623___amp 1 ATGAATTCGTTTACTGATAAACTGAGCAAATATGCAAAGCTTGTGGCCGA 50
BSNT_02409___ 51 AGTCGGCGTTAATGTCCAAAAAGGCCAGTATGTAGTCGTAAATGCTTCAA 100
|||||||||.||.||.||||||||.|||.|.||.|||.|.||.||.||||
BL01623___amp 51 AGTCGGCGTAAACGTTCAAAAAGGACAGCAAGTCGTCATCAACGCGTCAA 100
BSNT_02409___ 101 CAGACGTTCGGGATTTTGTCCGTTTAATTGTAAAACACGCATATGAAA-A 149
||||.||.||.|||||||..||..|..|.||.|||..|||.|||.||| |
BL01623___amp 101 CAGAAGTACGCGATTTTGCACGGCTCCTCGTCAAAAGCGCCTATCAAAGA 150
BSNT_02409___ 150 GGGCGCAAAAAACGTCACCGTGAATTGGCAGGATGACGAAGTCGCCAAAT 199
||| ||.||||||||.||.||....|||||||||||.||.|||.|.|...
BL01623___amp 151 GGG-GCGAAAAACGTGACGGTCCGCTGGCAGGATGATGAGGTCACAAGGC 199
BSNT_02409___ 200 TAAAATACGAACTTGCGCCGTTTGAAGCATTTGAAGAATATCCTGAATGG 249
|.||||||||.||.||.||....|||||.||||||||.|..|||||||||
BL01623___amp 200 TGAAATACGAGCTGGCTCCTGCGGAAGCCTTTGAAGAGTTCCCTGAATGG 249
BSNT_02409___ 250 GAAGCAAAAGG--CAGAGAAGAGCTTGCCAAAAATGGAGCTGCTTTCATT 297
||||||||.|| ..|||| .|||.||||||.|.||.||||||||.|||
BL01623___amp 250 GAAGCAAAGGGGCTTGAGA--CGCTCGCCAAAGAAGGCGCTGCTTTTATT 297
BSNT_02409___ 298 TCTGTTGTGTCGTCAAACCCAGA-CTTGCTAAAAGGTATAGATTCCAAAC 346
||..||||.||.||||..||.|| ||| .|.|||||.||.|||||||||.
BL01623___amp 298 TCCATTGTCTCTTCAAGTCCTGATCTT-TTGAAAGGCATCGATTCCAAAA 346
BSNT_02409___ 347 GGATTGCGGCATTCCAAAAAGCAGCAGGCAAAGCATTACATACATACAGA 396
..||..|.|||...||.|||||.|||||.|||||..|.|||||||||||.
BL01623___amp 347 AAATCTCCGCACAGCAGAAAGCCGCAGGAAAAGCGATGCATACATACAGG 396
BSNT_02409___ 397 CAATAT-ATTCAATCAGACAAAGTCAGCTGGACTGTCGTAGGTGCGGCAT 445
||| || ||||||||.||.||||||||||||||||||||.|..|||.|.|
BL01623___amp 397 CAA-ATGATTCAATCGGATAAAGTCAGCTGGACTGTCGTCGCAGCGCCTT 445
BSNT_02409___ 446 CAGCAGG-CTGGGCTCACAAGGTGTTTCCT--GGCAAATCAGAGGAGGAA 492
| ||.|| ||||||..|.||.||.||.||| ||||.|| ||.|||..|
BL01623___amp 446 C-GCCGGCCTGGGCGAAAAAAGTATTCCCTGAGGCAGAT--GAAGAGACA 492
BSNT_02409___ 493 GCGATCCACCTTCTGTGGGAAGAAATTTTTAAAGCGACGCGCGTAAA--- 539
||..|.||....||.|||.|.||.|||||.|||.||||.|||||..|
BL01623___amp 493 GCCGTGCAAAAGCTATGGAATGAGATTTTCAAAACGACCCGCGTTGACCG 542
BSNT_02409___ 540 TGAAGACAACCCGGTTCAGGCGTGGATCAATCATGACCAAAATCTT-CAT 588
||||| |.||.|||||.|||||||...||||.||.| |||.||| |..
BL01623___amp 543 TGAAG---ATCCCGTTCAAGCGTGGAAAGATCACGATC-AAACCTTGCGC 588
BSNT_02409___ 589 GAAAAAGTTGACCAT-TTGAACGAGAGACATT---ACGCTGCCTTACATT 634
||.|||| |.|.|.| ||.|||||.|..|||| |||| |||| ||||
BL01623___amp 589 GATAAAG-TAAGCGTCTTAAACGACAAGCATTATCACGC--CCTT-CATT 634
BSNT_02409___ 635 ATCAAGCTGAAGGAACTGATTTAACAATTAAGCTGCCTAGGAAGCATGTT 684
|.|||||..|.|||||.|||||.||.||..||||.||...|||||||.|.
BL01623___amp 635 ACCAAGCAAAGGGAACAGATTTGACGATCGAGCTTCCCGAGAAGCATCTG 684
BSNT_02409___ 685 TGGGCAGGTGCGGGAAGCGTGAATGAAAGCGGCCATGAGTTTATGGCCAA 734
||||..||.||.||||||...||.||||.||||...|||||.||||||||
BL01623___amp 685 TGGGTCGGCGCCGGAAGCACAAACGAAAACGGCGTCGAGTTCATGGCCAA 734
BSNT_02409___ 735 TATGCCGACAGAAGAAGTGTTCAC-GCTGCCGCAAAAAGACGGGGTTGAC 783
||||||||||||.|||||.||||| ||| |||.|||||||||||||..||
BL01623___amp 735 TATGCCGACAGAGGAAGTATTCACTGCT-CCGAAAAAAGACGGGGTGAAC 783
BSNT_02409___ 784 GGTGTGGTATCAAGCACAAAACCATTAAGCTACGGCGGAAATATTATTGA 833
||....||.||||||||.||.||.||||||||.|||||.|||.|.||.||
BL01623___amp 784 GGCACCGTTTCAAGCACGAAGCCGTTAAGCTATGGCGGCAATTTAATCGA 833
BSNT_02409___ 834 AAATTTCACCCTGACGTTTGAAAATGGCCGTATAGTCGACATTAAAGCTG 883
....||.||.|||||.|||.||||.||.||.||....||..|.|||||||
BL01623___amp 834 CGGCTTTACACTGACATTTAAAAACGGACGGATTACGGATGTCAAAGCTG 883
BSNT_02409___ 884 AAAAAGGTGAGGATATTTTAAAAGAACTGGTGGAAACAGATGAAGGTTCT 933
.|.||||.||.||.|||||||||||.|||.|.|||||.|||||.|||||.
BL01623___amp 884 GACAAGGCGAAGAAATTTTAAAAGAGCTGATCGAAACGGATGAGGGTTCA 933
BSNT_02409___ 934 CACTATTTAGGTGAAGTGGCACTTGTTCCTTACGATTCGCCTATATCACA 983
|||||.|||||.|||.|.||.||||||.|..||||||||||.||.|| ||
BL01623___amp 934 CACTACTTAGGCGAAATTGCGCTTGTTGCCCACGATTCGCCGATTTC-CA 982
BSNT_02409___ 984 A-TCAAACATTCTTTTCTATAACACGCTGTTTGATGAAAACGCGTCAAAT 1032
| ||.||.|||||.||.||.|||||.||||||||||||||.||.|||||.
BL01623___amp 983 AGTCCAATATTCTGTTTTACAACACACTGTTTGATGAAAATGCCTCAAAC 1032
BSNT_02409___ 1033 CATTTGGCGATCGGAAGCGCCTATGCCTTTAATATTGAAGGCGGAAAGCA 1082
||..|.||||||||.||.||.||.||.||.||.||.|||||||||||.||
BL01623___amp 1033 CACCTCGCGATCGGCAGTGCATACGCATTCAACATCGAAGGCGGAAAACA 1082
BSNT_02409___ 1083 GATGTCTCGTGAAGAGCTTGTCAAAGAAGGCCTAAATGAGAGCATTACAC 1132
||||||.||.||.|||||.|..||||||||..||||.||.|||||.||||
BL01623___amp 1083 GATGTCGCGCGAGGAGCTGGCGAAAGAAGGATTAAACGAAAGCATCACAC 1132
BSNT_02409___ 1133 ACGTGGACTTTATGATCGGTTCTAAG--GATATGAATATTGACGGAATTA 1180
|.||.||||||||||||||||| || ||.||||||||.||||||||.|
BL01623___amp 1133 ATGTTGACTTTATGATCGGTTC--AGGAGAAATGAATATAGACGGAATCA 1180
BSNT_02409___ 1181 CGGCAGACGGGAAAAGAGAGCCTATCTTCAGAAACGGAAATTGGGCTTTT 1230
|.||.|||||.|||||||||||.||.|||||||||||.||.|||||..|.
BL01623___amp 1181 CTGCTGACGGAAAAAGAGAGCCGATATTCAGAAACGGCAACTGGGCGATA 1230
BSNT_02409___ 1231 TAA 1233
|||
BL01623___amp 1231 TAA 1233
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