Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02435 and BL01620

See Amino acid alignment / Visit BSNT_02435 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_02435.1.5803.seq
#    -bsequence dna-align/BL01620.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02435-BL01620.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02435-BL01620.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02435
# 2: BL01620
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      95/124 (76.6%)
# Similarity:    95/124 (76.6%)
# Gaps:           8/124 ( 6.5%)
# Score: 349.0
# 
#
#=======================================

BSNT_02435         1 ATGGGTACGATTGTTTGCCAAGATTGCAACGAAGCCATTCATTACTTTGA     50
                     |||||.|||||.|||||.|||||.|||||.|||.|||||||..|.|||||
BL01620            1 ATGGGCACGATCGTTTGTCAAGACTGCAATGAAACCATTCAGCATTTTGA     50

BSNT_02435        51 AGATGAGAAAGTGACAACATTATACGGAACATGCTGCGGACAATGTCAA-     99
                     |||||||||||||||.|.|.|.||||||||   .||||||||.|| ||| 
BL01620           51 AGATGAGAAAGTGACGATACTTTACGGAAC---GTGCGGACAGTG-CAAC     96

BSNT_02435       100 TGTCCTGTT---GATGAAGAGTAA    120
                     ||.|.|.||   ||.|||||.||.
BL01620           97 TGCCATCTTAAAGAGGAAGAATAG    120


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