Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02433 and BL01619
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02433___pdhD.1.5803.seq
# -bsequence dna-align/BL01619___pdhD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02433___pdhD-BL01619___pdhD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02433___pdhD-BL01619___pdhD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02433___pdhD
# 2: BL01619___pdhD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1421
# Identity: 1209/1421 (85.1%)
# Similarity: 1209/1421 (85.1%)
# Gaps: 16/1421 ( 1.1%)
# Score: 5177.0
#
#
#=======================================
BSNT_02433___ 1 ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTAATTGGTGC 50
|||||||||||||||||||||||||||||||||||||||||.||||||||
BL01619___pdh 1 ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTCATTGGTGC 50
BSNT_02433___ 51 GGGACCTGGCGGCTATGTAGCTGCCATCCGCGCTGCACAGCTTGGACAAA 100
||||||||||||||||||||||||||||||||||||.|||||||||||||
BL01619___pdh 51 GGGACCTGGCGGCTATGTAGCTGCCATCCGCGCTGCTCAGCTTGGACAAA 100
BSNT_02433___ 101 AAGTAACAGTCGTTGAAAAA-GCAACTCTTGGAGGCGTTTGTCTGAACGT 149
||||||||.||||.|||||| |||| ||||||||||||.||||||||.||
BL01619___pdh 101 AAGTAACAATCGTCGAAAAAGGCAA-TCTTGGAGGCGTATGTCTGAATGT 149
BSNT_02433___ 150 TGGATGTATCCCTTCAAAAGCGCTGATCAATGCAGGTCACCGTTATGAGA 199
.|||||||||||||||||||||||.|||||||||||.|||||.|||||||
BL01619___pdh 150 CGGATGTATCCCTTCAAAAGCGCTTATCAATGCAGGCCACCGCTATGAGA 199
BSNT_02433___ 200 ATGCAAAACATTCTGATGACATGGGAATCACTGCTGAGAATGTAACAGTT 249
||||.||.||||||||.||.|||||.|||||||||||.||.||||.||||
BL01619___pdh 200 ATGCGAAGCATTCTGAAGAGATGGGGATCACTGCTGAAAACGTAAAAGTT 249
BSNT_02433___ 250 GATTTCACAAAAGTTCAAGAATGGAAAGCTTCTGTTGTCAACAAGCTTAC 299
||.||.|||||.|||||||||||||||||.|||||.||.||.||||||||
BL01619___pdh 250 GACTTTACAAAGGTTCAAGAATGGAAAGCCTCTGTCGTTAATAAGCTTAC 299
BSNT_02433___ 300 TGGCGGTGTAGCAGGTCTTCTTAAAGGCAACAAAGTAGATGTTGTAAAAG 349
.||||||||.|.|||.|||||.|||||.||||||||.||..|.|||||||
BL01619___pdh 300 CGGCGGTGTTGAAGGCCTTCTGAAAGGAAACAAAGTCGACATCGTAAAAG 349
BSNT_02433___ 350 GTGAAGCTTACTTTGTAGACAGCAATTCAGTTCGTGTTATGGATGAGAAC 399
|.|||||.||||||||||||||||||||.||.||.||.||||||||||||
BL01619___pdh 350 GCGAAGCATACTTTGTAGACAGCAATTCTGTACGCGTGATGGATGAGAAC 399
BSNT_02433___ 400 TCTGCTCAAACATACACGTTCAAAAATGCAATCATCGCTACTGGATCTCG 449
||.|||||.||.|||||||||||||||||.|||||.||.||.||.|||||
BL01619___pdh 400 TCAGCTCAGACTTACACGTTCAAAAATGCGATCATTGCAACAGGTTCTCG 449
BSNT_02433___ 450 TCCTATCGAATTGCCAAACTTCAAATATAGTGAGCGTGTCCTGAATTCAA 499
.|||||||||||||||||||||||||||||.||.||.||.||||||||||
BL01619___pdh 450 CCCTATCGAATTGCCAAACTTCAAATATAGCGACCGCGTACTGAATTCAA 499
BSNT_02433___ 500 CTGGAGCTTTGGCTCTTAAAGAAATTCCTAAAAAGCTCGTTGTTATCGGC 549
|.||.||..|.||.||.||||||||||||||.|||||||||||.||||||
BL01619___pdh 500 CAGGCGCACTTGCACTGAAAGAAATTCCTAAGAAGCTCGTTGTCATCGGC 549
BSNT_02433___ 550 GGCGGATACATCGGAACTGAACTTGGAACTGCGTATGCTAACTTCGGTAC 599
|||||.|||||||||||.||.||.||.|||||.|||||.|||||||||||
BL01619___pdh 550 GGCGGCTACATCGGAACAGAGCTCGGTACTGCATATGCAAACTTCGGTAC 599
BSNT_02433___ 600 TGAACTTGTTATTCTTGAAGGCGGAGATGAAATTCTTCCTGGCTTCGAAA 649
||||.||||.|||||||||||||||||.|||||.|||||.||.||.||.|
BL01619___pdh 600 TGAAGTTGTCATTCTTGAAGGCGGAGAAGAAATCCTTCCAGGATTTGAGA 649
BSNT_02433___ 650 AACAAATGAGTTCTCTCGTTACACGCAGACTGAAGAAAAAAGGCAACGTT 699
|.||||||||.|||||.||.|.|||||..|||||||||||||||||||||
BL01619___pdh 650 AGCAAATGAGCTCTCTTGTGAAACGCAACCTGAAGAAAAAAGGCAACGTT 699
BSNT_02433___ 700 GAAATCCATACAAACGCGATGGCTAAAGGCGTTGAAGAAAGACCAGACGG 749
||||||||||||||.||.||||||||||||||.|||||||.|.|.|||||
BL01619___pdh 700 GAAATCCATACAAAAGCAATGGCTAAAGGCGTAGAAGAAAAAGCTGACGG 749
BSNT_02433___ 750 CGTAACAGTTACTTTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTG 799
||||||.|||||.||||||||.|||||||||||..|||||.|.|||||.|
BL01619___pdh 750 CGTAACCGTTACGTTCGAAGTGAAAGGCGAAGAGCAAACGATCGATGCGG 799
BSNT_02433___ 800 ATTACGTA-TTGATTACAGTAGGACGCCGTCCAAACACTGATGAGCTTGG 848
|.|||||| ||| |.||.||.||.|||..|.|||||||.||.|||||.||
BL01619___pdh 800 ACTACGTACTTG-TCACTGTCGGCCGCGTTGCAAACACGGACGAGCTCGG 848
BSNT_02433___ 849 TCTTGAGCAAGTCGGTATCGAAATGACGGACCGCGGTATTGTGAAAACTG 898
.|||||.||||||||..|||||||||||||||||||.||..|.|||||.|
BL01619___pdh 849 ACTTGAACAAGTCGGCGTCGAAATGACGGACCGCGGCATCATCAAAACGG 898
BSNT_02433___ 899 ACAAACAGTGCCGCACAAACGTACCTAACATTTATGCAATCGGTGATATC 948
|||||||.|||||.||||||.|.||.|||||.|||||.||||||||.|||
BL01619___pdh 899 ACAAACAATGCCGTACAAACATTCCGAACATCTATGCGATCGGTGACATC 948
BSNT_02433___ 949 ATCGAAGGACCGCCGCTTGCTCATAAAGCATCTTACGAAGGTAAAATCGC 998
||||||||.||.||||||||.||||||||.|||||.|||||||||||.||
BL01619___pdh 949 ATCGAAGGTCCTCCGCTTGCGCATAAAGCTTCTTATGAAGGTAAAATTGC 998
BSNT_02433___ 999 TGCAGAAGCTATCGCTGGAGAGCCTGCAGAAATCGATTACCTTGGTATTC 1048
|||.|||||.||.||.|||||..||||.||||||||.||.|||||.||||
BL01619___pdh 999 TGCTGAAGCGATTGCCGGAGAAGCTGCGGAAATCGACTATCTTGGAATTC 1048
BSNT_02433___ 1049 CTGCGGTTGTTTTCTCTGAGCCTGAACTTGCATCAGTTGGTTACACTGAA 1098
|||||||.||.|||||||||||||||||||||||.||.||.|||||||||
BL01619___pdh 1049 CTGCGGTCGTATTCTCTGAGCCTGAACTTGCATCTGTAGGCTACACTGAA 1098
BSNT_02433___ 1099 GCACAGGCGAAAGAAGAAGGTCT-----TGACATTGTTGCTGCTAAATTC 1143
||||||||.|||||||||||||| |||| |||.||.||||||
BL01619___pdh 1099 GCACAGGCTAAAGAAGAAGGTCTTTCAGTGAC-----TGCAGCCAAATTC 1143
BSNT_02433___ 1144 CCATTTGCAGCAAACGGCCGCGCGCTTTCTCTTAACGAAACAGACGGCTT 1193
||.||||||||||||||.||.|||||.||..|.||||||||.|||||.||
BL01619___pdh 1144 CCGTTTGCAGCAAACGGACGTGCGCTGTCATTAAACGAAACTGACGGTTT 1193
BSNT_02433___ 1194 CATGAAGCTGATCACTCGTAAAGAGGACGGTCTT-GTGATCGGTGCGCAA 1242
|.|.||.||..|.||.||.|||||.||||| ||| ||.||||||||.|||
BL01619___pdh 1194 CCTTAAACTTGTAACACGCAAAGAAGACGG-CTTAGTCATCGGTGCACAA 1242
BSNT_02433___ 1243 ATCGCCGGAGCAAGTGCTTCTGATATGATTTCTGAATTAAGCCTAGCGAT 1292
||||||||||||||.||||||||.|||||||||||..|.|||.|.||.||
BL01619___pdh 1243 ATCGCCGGAGCAAGCGCTTCTGACATGATTTCTGAGCTGAGCTTGGCAAT 1292
BSNT_02433___ 1293 TGAAGGCGGCATGACTGCTGAAGATATCGCGATGACAATTCACGCTCACC 1342
.||||..||.||||||||||||||||||||.||||||||.||||||||||
BL01619___pdh 1293 CGAAGCAGGAATGACTGCTGAAGATATCGCAATGACAATCCACGCTCACC 1342
BSNT_02433___ 1343 CAACATTGGGCGAAATCACAATGGAAGCTGCTGAAGTGGCAATCGGAAGT 1392
|.||||||||.||||||||||||||||||||.|||||.||.|||||.|..
BL01619___pdh 1343 CTACATTGGGAGAAATCACAATGGAAGCTGCAGAAGTTGCCATCGGCATG 1392
BSNT_02433___ 1393 CCGATTCACATCGTAAAATAA 1413
|||||.|||.|.|||||||||
BL01619___pdh 1393 CCGATCCACGTTGTAAAATAA 1413
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