Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02431 and BL01617
See
Amino acid alignment /
Visit
BSNT_02431 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02431___pdhB.1.5803.seq
# -bsequence dna-align/BL01617___pdhB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02431___pdhB-BL01617___pdhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02431___pdhB-BL01617___pdhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02431___pdhB
# 2: BL01617___pdhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity: 841/978 (86.0%)
# Similarity: 841/978 (86.0%)
# Gaps: 0/978 ( 0.0%)
# Score: 3657.0
#
#
#=======================================
BSNT_02431___ 1 ATGGCGCAAATGACAATGATTCAAGCAATCACGGATGCGTTACGCACAGA 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
BL01617___pdh 1 ATGGCGCAAATGACAATGATTCAAGCAATCACTGATGCGTTACGCACAGA 50
BSNT_02431___ 51 ACTGAAAAATGACGAAAATGTCTTAGTTTTCGGAGAAGACGTTGGTGTAA 100
||||||||||||||||||||||||||||||||||||||||||.|||||.|
BL01617___pdh 51 ACTGAAAAATGACGAAAATGTCTTAGTTTTCGGAGAAGACGTCGGTGTTA 100
BSNT_02431___ 101 ACGGCGGCGTATTCCGTGCGACAGAAGGATTGCAAAAAGAATTCGGTGAA 150
||||||||||.|||||||||||.|||||||||||||||||.||.|||||.
BL01617___pdh 101 ACGGCGGCGTGTTCCGTGCGACTGAAGGATTGCAAAAAGAGTTTGGTGAG 150
BSNT_02431___ 151 GACCGTGTGTTTGACACGCCACTTGCTGAATCTGGTATCGGCGGTCTTGC 200
||.||.||.||||||||.||.|||||||||||||||||||||||.|||||
BL01617___pdh 151 GATCGCGTATTTGACACTCCTCTTGCTGAATCTGGTATCGGCGGCCTTGC 200
BSNT_02431___ 201 CCTTGGTTTAGGCTTAAACGGCTTCCGTCCGGTAATGGAAATCCAATTCT 250
.||.||.|||||||||.|.|||||||||||.|||||||||||.|||||.|
BL01617___pdh 201 ACTCGGCTTAGGCTTACAAGGCTTCCGTCCTGTAATGGAAATTCAATTTT 250
BSNT_02431___ 251 TCGGATTTGTCTATGAAGTAATGGATTCAGTTTCTGGCCAAATGGCTCGT 300
||||.|||||.||||||||.|||||.||.|||||.||.||||||||.||.
BL01617___pdh 251 TCGGCTTTGTGTATGAAGTGATGGACTCTGTTTCCGGACAAATGGCACGG 300
BSNT_02431___ 301 ATGCGCTACCGTTCTGGCGGACGCTGGACTTCACCTGTAACAATTCGTTC 350
||||||||||||||.|||||.|||||||.|||.||.||.|||||.|||||
BL01617___pdh 301 ATGCGCTACCGTTCCGGCGGTCGCTGGAATTCTCCGGTGACAATCCGTTC 350
BSNT_02431___ 351 TCCATTCGGCGGCGGTGTTCATACTCCTGAACTTCACGCTGACAGCTTGG 400
|||.||||||||||||||||||||.||||||||||||||.||||||||||
BL01617___pdh 351 TCCGTTCGGCGGCGGTGTTCATACGCCTGAACTTCACGCGGACAGCTTGG 400
BSNT_02431___ 401 AAGGTCTTGTTGCACAACAGCCTGGTATCAAAGTTGTGATTCCATCAACT 450
||||.||.||||||||.||||||||..|.|||||.||.|||||.||||||
BL01617___pdh 401 AAGGACTCGTTGCACAGCAGCCTGGACTTAAAGTCGTTATTCCTTCAACT 450
BSNT_02431___ 451 CCTTACGATGCCAAAGGACTTTTAATTTCTGCGATCAGAGACAATGATCC 500
||.||||||||.||||||||||||||.|||||||||.|.||.||.|||||
BL01617___pdh 451 CCGTACGATGCTAAAGGACTTTTAATCTCTGCGATCCGCGATAACGATCC 500
BSNT_02431___ 501 TGTTGTCTTCTTAGAGCATATGAAGCTTTACCGTTCTTTCCGTCAGGAAG 550
.|||||||||.|.|||||.|||||.|||||||||||.|||||.|||||||
BL01617___pdh 501 GGTTGTCTTCCTTGAGCACATGAAACTTTACCGTTCATTCCGCCAGGAAG 550
BSNT_02431___ 551 TTCCTGAAGAAGAATACACAATTGAGCTTGGAAAAGCTGACGTGAAACGT 600
||||||||||.||||||||||||||..|.||.|||||.||.||||||||.
BL01617___pdh 551 TTCCTGAAGAGGAATACACAATTGAAATCGGCAAAGCCGATGTGAAACGC 600
BSNT_02431___ 601 GAAGGTACTGATCTTTCAATCATTACTTACGGCGCAATGGTTCATGAATC 650
|||||.|..||.|||||.|||||.||.|||||.||.||||||||.||.||
BL01617___pdh 601 GAAGGAAAAGACCTTTCCATCATCACATACGGAGCGATGGTTCACGAGTC 650
BSNT_02431___ 651 ATTAAAAGCTGCTGAGGAGCTTGAAAAAGACGGCATTTCTGCTGAAGTTG 700
|||||||||.||.||.||||||||||||||.|||.|.||||||||.||||
BL01617___pdh 651 ATTAAAAGCGGCGGAAGAGCTTGAAAAAGAAGGCGTATCTGCTGAGGTTG 700
BSNT_02431___ 701 TCGACCTTCGTACAGTAAGCCCACTTGATATCGATACAATCATCGCTTCT 750
||||||||||.|||||.|||||.|||||.||.||.||.||||||||.|||
BL01617___pdh 701 TCGACCTTCGCACAGTCAGCCCGCTTGACATTGACACGATCATCGCGTCT 750
BSNT_02431___ 751 GTAGAAAAAACAGGACGCGCGATTGTCGTTCAAGAGGCACAAAAACAAGC 800
||||||||||||||.|||||.||.||||||||||||||.||||||||.||
BL01617___pdh 751 GTAGAAAAAACAGGCCGCGCAATCGTCGTTCAAGAGGCGCAAAAACAGGC 800
BSNT_02431___ 801 CGGTATTGCTGCAAACGTAGTAGCAGAAATTAATGACCGTGCGATCCTGA 850
.||..|.|||||||||||.||.||.|||||.||.|||||.|||||..|||
BL01617___pdh 801 TGGAGTAGCTGCAAACGTTGTTGCCGAAATCAACGACCGCGCGATTTTGA 850
BSNT_02431___ 851 GCTTGGAAGCACCTGTACTTCGCGTTGCAGCGCCAGATACAGTATTTCCT 900
||.|.|||||.||.||.||||||||..|.||.||.|||||.|||||..|.
BL01617___pdh 851 GCCTCGAAGCTCCAGTGCTTCGCGTCACTGCTCCTGATACTGTATTCGCA 900
BSNT_02431___ 901 TTCTCTCAAGCGGAGAGCGTATGGCTTCCAAACCATAAAGACGTTCTTGA 950
|||||||||||.||.|||||||||||||||||||||||||||||.|||||
BL01617___pdh 901 TTCTCTCAAGCTGAAAGCGTATGGCTTCCAAACCATAAAGACGTGCTTGA 950
BSNT_02431___ 951 AACAGCAAGAAAAGTACTTGAATTTTAA 978
|||.||.|.|||||||.|.|||||||||
BL01617___pdh 951 AACTGCGAAAAAAGTATTGGAATTTTAA 978
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.