Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02431 and BL01617

See Amino acid alignment / Visit BSNT_02431 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_02431___pdhB.1.5803.seq
#    -bsequence dna-align/BL01617___pdhB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02431___pdhB-BL01617___pdhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02431___pdhB-BL01617___pdhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02431___pdhB
# 2: BL01617___pdhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     841/978 (86.0%)
# Similarity:   841/978 (86.0%)
# Gaps:           0/978 ( 0.0%)
# Score: 3657.0
# 
#
#=======================================

BSNT_02431___      1 ATGGCGCAAATGACAATGATTCAAGCAATCACGGATGCGTTACGCACAGA     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BL01617___pdh      1 ATGGCGCAAATGACAATGATTCAAGCAATCACTGATGCGTTACGCACAGA     50

BSNT_02431___     51 ACTGAAAAATGACGAAAATGTCTTAGTTTTCGGAGAAGACGTTGGTGTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||.|
BL01617___pdh     51 ACTGAAAAATGACGAAAATGTCTTAGTTTTCGGAGAAGACGTCGGTGTTA    100

BSNT_02431___    101 ACGGCGGCGTATTCCGTGCGACAGAAGGATTGCAAAAAGAATTCGGTGAA    150
                     ||||||||||.|||||||||||.|||||||||||||||||.||.|||||.
BL01617___pdh    101 ACGGCGGCGTGTTCCGTGCGACTGAAGGATTGCAAAAAGAGTTTGGTGAG    150

BSNT_02431___    151 GACCGTGTGTTTGACACGCCACTTGCTGAATCTGGTATCGGCGGTCTTGC    200
                     ||.||.||.||||||||.||.|||||||||||||||||||||||.|||||
BL01617___pdh    151 GATCGCGTATTTGACACTCCTCTTGCTGAATCTGGTATCGGCGGCCTTGC    200

BSNT_02431___    201 CCTTGGTTTAGGCTTAAACGGCTTCCGTCCGGTAATGGAAATCCAATTCT    250
                     .||.||.|||||||||.|.|||||||||||.|||||||||||.|||||.|
BL01617___pdh    201 ACTCGGCTTAGGCTTACAAGGCTTCCGTCCTGTAATGGAAATTCAATTTT    250

BSNT_02431___    251 TCGGATTTGTCTATGAAGTAATGGATTCAGTTTCTGGCCAAATGGCTCGT    300
                     ||||.|||||.||||||||.|||||.||.|||||.||.||||||||.||.
BL01617___pdh    251 TCGGCTTTGTGTATGAAGTGATGGACTCTGTTTCCGGACAAATGGCACGG    300

BSNT_02431___    301 ATGCGCTACCGTTCTGGCGGACGCTGGACTTCACCTGTAACAATTCGTTC    350
                     ||||||||||||||.|||||.|||||||.|||.||.||.|||||.|||||
BL01617___pdh    301 ATGCGCTACCGTTCCGGCGGTCGCTGGAATTCTCCGGTGACAATCCGTTC    350

BSNT_02431___    351 TCCATTCGGCGGCGGTGTTCATACTCCTGAACTTCACGCTGACAGCTTGG    400
                     |||.||||||||||||||||||||.||||||||||||||.||||||||||
BL01617___pdh    351 TCCGTTCGGCGGCGGTGTTCATACGCCTGAACTTCACGCGGACAGCTTGG    400

BSNT_02431___    401 AAGGTCTTGTTGCACAACAGCCTGGTATCAAAGTTGTGATTCCATCAACT    450
                     ||||.||.||||||||.||||||||..|.|||||.||.|||||.||||||
BL01617___pdh    401 AAGGACTCGTTGCACAGCAGCCTGGACTTAAAGTCGTTATTCCTTCAACT    450

BSNT_02431___    451 CCTTACGATGCCAAAGGACTTTTAATTTCTGCGATCAGAGACAATGATCC    500
                     ||.||||||||.||||||||||||||.|||||||||.|.||.||.|||||
BL01617___pdh    451 CCGTACGATGCTAAAGGACTTTTAATCTCTGCGATCCGCGATAACGATCC    500

BSNT_02431___    501 TGTTGTCTTCTTAGAGCATATGAAGCTTTACCGTTCTTTCCGTCAGGAAG    550
                     .|||||||||.|.|||||.|||||.|||||||||||.|||||.|||||||
BL01617___pdh    501 GGTTGTCTTCCTTGAGCACATGAAACTTTACCGTTCATTCCGCCAGGAAG    550

BSNT_02431___    551 TTCCTGAAGAAGAATACACAATTGAGCTTGGAAAAGCTGACGTGAAACGT    600
                     ||||||||||.||||||||||||||..|.||.|||||.||.||||||||.
BL01617___pdh    551 TTCCTGAAGAGGAATACACAATTGAAATCGGCAAAGCCGATGTGAAACGC    600

BSNT_02431___    601 GAAGGTACTGATCTTTCAATCATTACTTACGGCGCAATGGTTCATGAATC    650
                     |||||.|..||.|||||.|||||.||.|||||.||.||||||||.||.||
BL01617___pdh    601 GAAGGAAAAGACCTTTCCATCATCACATACGGAGCGATGGTTCACGAGTC    650

BSNT_02431___    651 ATTAAAAGCTGCTGAGGAGCTTGAAAAAGACGGCATTTCTGCTGAAGTTG    700
                     |||||||||.||.||.||||||||||||||.|||.|.||||||||.||||
BL01617___pdh    651 ATTAAAAGCGGCGGAAGAGCTTGAAAAAGAAGGCGTATCTGCTGAGGTTG    700

BSNT_02431___    701 TCGACCTTCGTACAGTAAGCCCACTTGATATCGATACAATCATCGCTTCT    750
                     ||||||||||.|||||.|||||.|||||.||.||.||.||||||||.|||
BL01617___pdh    701 TCGACCTTCGCACAGTCAGCCCGCTTGACATTGACACGATCATCGCGTCT    750

BSNT_02431___    751 GTAGAAAAAACAGGACGCGCGATTGTCGTTCAAGAGGCACAAAAACAAGC    800
                     ||||||||||||||.|||||.||.||||||||||||||.||||||||.||
BL01617___pdh    751 GTAGAAAAAACAGGCCGCGCAATCGTCGTTCAAGAGGCGCAAAAACAGGC    800

BSNT_02431___    801 CGGTATTGCTGCAAACGTAGTAGCAGAAATTAATGACCGTGCGATCCTGA    850
                     .||..|.|||||||||||.||.||.|||||.||.|||||.|||||..|||
BL01617___pdh    801 TGGAGTAGCTGCAAACGTTGTTGCCGAAATCAACGACCGCGCGATTTTGA    850

BSNT_02431___    851 GCTTGGAAGCACCTGTACTTCGCGTTGCAGCGCCAGATACAGTATTTCCT    900
                     ||.|.|||||.||.||.||||||||..|.||.||.|||||.|||||..|.
BL01617___pdh    851 GCCTCGAAGCTCCAGTGCTTCGCGTCACTGCTCCTGATACTGTATTCGCA    900

BSNT_02431___    901 TTCTCTCAAGCGGAGAGCGTATGGCTTCCAAACCATAAAGACGTTCTTGA    950
                     |||||||||||.||.|||||||||||||||||||||||||||||.|||||
BL01617___pdh    901 TTCTCTCAAGCTGAAAGCGTATGGCTTCCAAACCATAAAGACGTGCTTGA    950

BSNT_02431___    951 AACAGCAAGAAAAGTACTTGAATTTTAA    978
                     |||.||.|.|||||||.|.|||||||||
BL01617___pdh    951 AACTGCGAAAAAAGTATTGGAATTTTAA    978


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