Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02398 and BL01602
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence dna-align/BSNT_02398___yknY.1.5803.seq
# -bsequence dna-align/BL01602___yknY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02398___yknY-BL01602___yknY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02398___yknY-BL01602___yknY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02398___yknY
# 2: BL01602___yknY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 717
# Identity: 520/717 (72.5%)
# Similarity: 520/717 (72.5%)
# Gaps: 48/717 ( 6.7%)
# Score: 1837.5
#
#
#=======================================
BSNT_02398___ 1 ATGATTCAGCTTTCTAATGTGCGAAAAAGCTATCAGATCGGAAAGGAAAC 50
||||||.|||||||.||.|||..|||||||||.||.||||||...|||||
BL01602___ykn 1 ATGATTGAGCTTTCCAAAGTGAAAAAAAGCTACCAAATCGGAGGAGAAAC 50
BSNT_02398___ 51 GTTTGATGTTCTCCATTCTATTGATTTGGACATTCATCAAGGTGAATATG 100
..|||||||||||......||.|||.||.|.||..|.|..||.||||||.
BL01602___ykn 51 CATTGATGTTCTCAGGGAGATCGATATGAAAATCGAGCCGGGAGAATATC 100
BSNT_02398___ 101 TCTCGATTATGGGGCCGTCAGGATCAGGAAAATCGACGATCATGAATATT 150
|.||.||.|||||||||||.||.||.||||||||||||||||||||.|||
BL01602___ykn 101 TGTCCATCATGGGGCCGTCCGGTTCGGGAAAATCGACGATCATGAACATT 150
BSNT_02398___ 151 ATCGGCTGTCTTGATCGGCCGACTTCCGGTACATATCA-ATTGGACGGCG 199
||||||||.|||||.||.|||||.||.||||..|| || ..|||||||||
BL01602___ykn 151 ATCGGCTGCCTTGACCGCCCGACATCGGGTATTTA-CAGGCTGGACGGCG 199
BSNT_02398___ 200 AAGACATTTCTTCATA----TAAAGATAAAGAACTGGCGGCAGTCCGTAA 245
|.||.|||||.||||| .|||| .||.||.||.|..|||.|.||
BL01602___ykn 200 AGGATATTTCATCATACGGCGAAAG----GGAGCTTGCCGGTGTCAGAAA 245
BSNT_02398___ 246 CCGGTCCATCGGTTTTGTGTTTCAGCAATTTCAGCTTCTTCCGCGGCTGA 295
|||.|..|||||||||||.||||||||.|||||||||||.|||||..|||
BL01602___ykn 246 CCGTTTAATCGGTTTTGTTTTTCAGCAGTTTCAGCTTCTGCCGCGCTTGA 295
BSNT_02398___ 296 ACGCAAAAAAAAATGTCGAGCTGCCGATGATTTATTCCGGGATAGGC--- 342
|.||.|.|||||||||.|||||.||||||||||| ||| .|||
BL01602___ykn 296 ATGCCATAAAAAATGTGGAGCTTCCGATGATTTA---CGG---CGGCGTT 339
BSNT_02398___ 343 ---AAAAAGGAACGTCAAGAGCGGGCTGAGAGAGCATTGGAAAAGGTCGG 389
|.||||||.||.|..|||||||||||..|.||..|.|||||.|||||
BL01602___ykn 340 CCAAGAAAGGAGCGGCGGGAGCGGGCTGAACGGGCGCTCGAAAAAGTCGG 389
BSNT_02398___ 390 GTTAGCAA--ATCGAATGCTCCACATGCCCAACGAGCTGTCTGGCGGGCA 437
|.| ||| |..||||||.|||.|||||.||||||||.||.||||||||
BL01602___ykn 390 GCT--CAAGGACAGAATGCGCCATATGCCGAACGAGCTTTCCGGCGGGCA 437
BSNT_02398___ 438 GAAGCAGCGGGTGGCGATTGCGAGGGCGATCGTGAATGAGCCCAAATTGA 487
.||.|||||.||.||.||.||.||.||||||||.|||||.||.|||.|||
BL01602___ykn 438 AAAACAGCGTGTAGCCATCGCTAGAGCGATCGTCAATGAACCGAAACTGA 487
BSNT_02398___ 488 TTTTAGCTGATGAACCGACCGGCGCGCTAGATACGAAAACAAGCGAGGCG 537
|.||.|||||||||||||||||.|||||.|||||||||||||||..||..
BL01602___ykn 488 TATTGGCTGATGAACCGACCGGAGCGCTCGATACGAAAACAAGCCGGGAC 537
BSNT_02398___ 538 ATTATGGATCAGTTTACAGCATTAAATGCCGAGGGAACGACAATCGTTCT 587
||.|||||.||.||.||.|.|||.||||..||.||||||||..|.||.||
BL01602___ykn 538 ATCATGGAGCAATTCACCGAATTGAATGAGGAAGGAACGACGGTGGTGCT 587
BSNT_02398___ 588 GGTTACTCACGAGCCTGAAGTAGCAGATTGCACGAATCGGATCGTCATGG 637
.||.||.|||||.||||||.|.||.||.|..||.|..||||.|.||||||
BL01602___ykn 588 CGTCACACACGAACCTGAAATTGCGGACTATACAAGCCGGACCATCATGG 637
BSNT_02398___ 638 TGCGTGACGGAAACATTGT--TC--CTGCCAGCTCCGG--ACAAAGGAGT 681
||.|.||||| ||| || || |.|||| |||.||..|.
BL01602___ykn 638 TGAGGGACGG------TGTGATCGTCT-----CGCCGGAAACAGAGCGGA 676
BSNT_02398___ 682 GTGGGA-----GAATGA 693
|.|||| .|||||
BL01602___ykn 677 GGGGGACGGTGCAATGA 693
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