Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01948 and BL01592
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01948___tenA.1.5803.seq
# -bsequence dna-align/BL01592___tenA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01948___tenA-BL01592___tenA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01948___tenA-BL01592___tenA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01948___tenA
# 2: BL01592___tenA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 724
# Identity: 531/724 (73.3%)
# Similarity: 531/724 (73.3%)
# Gaps: 35/724 ( 4.8%)
# Score: 1882.0
#
#
#=======================================
BSNT_01948___ 1 GTGAAGTTTTCAGAAGAATGCCG---CAGCGCAGCCGCAGAA--TGGTGG 45
.|||||||||||||||||||||| ||||||.|| || ||||||
BL01592___ten 1 ATGAAGTTTTCAGAAGAATGCCGAAACAGCGCTGC-----AACTTGGTGG 45
BSNT_01948___ 46 GAGGGGAGCTTTGTCCATCCGTTCGTTCAAGGAATCGGTGATGGAACGCT 95
||.|||||.||||||||||||||..||||||||||.||.||.||.||.||
BL01592___ten 46 GAAGGGAGTTTTGTCCATCCGTTTATTCAAGGAATTGGAGACGGCACACT 95
BSNT_01948___ 96 TCCGATTGACCGTTTTAAATACTACGTACTTCAGGATTCCTATTATTTAA 145
||||.|||||||.|||||||||||.||..|.|||||||||||.|||||.|
BL01592___ten 96 TCCGGTTGACCGATTTAAATACTATGTCATGCAGGATTCCTACTATTTGA 145
BSNT_01948___ 146 CGCATTTTGCAAAGGTGCAGTCATTTGGCGCCTCTTATGCGAAGGATCTT 195
|.||.|||||.||.||.||.||.|||||.||..|.|||||..|.|||||.
BL01592___ten 146 CCCACTTTGCCAAAGTCCAATCCTTTGGAGCGGCATATGCTCACGATCTA 195
BSNT_01948___ 196 TATACAACGGGGCGGATGGC--AAGCCATGCCCAAGGTACATATGAGGCG 243
|||||.||..|.|||||||| || ||.||..||||.||||||||.||.
BL01592___ten 196 TATACGACAAGCCGGATGGCCGAA--CACGCGAAAGGGACATATGAAGCC 243
BSNT_01948___ 244 GAAATGGCGCTTCATCGCGAGTTTGCCGAGCTGTTGGAAATCAGCGAGGA 293
||.|||.||||.||..|..|.||..||||.||.||||..||||...||||
BL01592___ten 244 GAGATGTCGCTCCACAGGAAATTCACCGATCTATTGGGCATCACAAAGGA 293
BSNT_01948___ 294 AGAGCGTAAGGCGTTTAAGCCGTCTCCTACAGCGTACTCTTATACATCCC 343
|||||...||.|||||.|||||||.||.||||||||..|.||.|||||.|
BL01592___ten 294 AGAGCTGGAGTCGTTTCAGCCGTCGCCGACAGCGTATGCGTACACATCGC 343
BSNT_01948___ 344 ATATGTACCGTTCGGTTTTGAGCAGGAATTTCGCAGAAATCTTAGCGGCC 393
||.||||||||||.||..|.|||.|.|.|||.||.|||||..|.||.||.
BL01592___ten 344 ATTTGTACCGTTCTGTCGTCAGCGGCAGTTTTGCGGAAATACTCGCTGCT 393
BSNT_01948___ 394 CTGCTGCCATGCTACTGGCTTTATTACGAGGTTGGTGAGAAATTGCTGCA 443
.||||.||.|||||.|||||.|||||.||.||.||.| ||..||||.|
BL01592___ten 394 TTGCTTCCTTGCTATTGGCTCTATTATGACGTCGGCG---AAACGCTGAA 440
BSNT_01948___ 444 ---TTGCGATCCTGGGCATC-CGATTTATCAAAAGTGGATTGGGACGTAC 489
.|||...||| |.||.| ||||||||||..|.|||||.|.|||.|||
BL01592___ten 441 AACGTGCAGGCCT-GACAACGCGATTTATCAGGAATGGATCGCGACATAC 489
BSNT_01948___ 490 GGCGGTGACTGGTTTAGACAACAGGTTGAGGAGCAAATCAACCGCTTTGA 539
||.||.||||||||||.|.||...||...|||.||.|||||||||||.||
BL01592___ten 490 GGAGGAGACTGGTTTAAAAAATCTGTAACGGAACAGATCAACCGCTTCGA 539
BSNT_01948___ 540 TGAGCTGGCGGAAAACAGCACG--GAGGAAGTGCGTGCCAAGATGAAAGA 587
|||||||||.|||||| || || |||.||..|||.||.||||||||.||
BL01592___ten 540 TGAGCTGGCTGAAAAC-GC-CGATGAGAAAACGCGCGCGAAGATGAAGGA 587
BSNT_01948___ 588 GAATTTTGTCATCTCCAGCTACTATGAATATCAATTTTGGGGAATGGCCT 637
||||||.|||||||||||||.|||.|||||.|..||.||||..|||||||
BL01592___ten 588 GAATTTCGTCATCTCCAGCTTCTACGAATACCGGTTCTGGGATATGGCCT 637
BSNT_01948___ 638 ATCGAAAAGAAGGCTGGTCTGACAGCGCCATAAAAGAGGTGGAGGAATGT 687
|||.|||||||.|||||||..|.||| |.||||||..|...|
BL01592___ten 638 ATCAAAAAGAAAGCTGGTCAAAAAGC---------GGGGTGGATCAGCTT 678
BSNT_01948___ 688 GGAGCTTCACGCCATAACGGATGA 711
|.|.||.|||||.||.||.|||||
BL01592___ten 679 GCATCTGCACGCGATCACCGATGA 702
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