Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01949 and BL01591

See Amino acid alignment / Visit BSNT_01949 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence dna-align/BSNT_01949___tenI.1.5803.seq
#    -bsequence dna-align/BL01591___tenI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01949___tenI-BL01591___tenI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01949___tenI-BL01591___tenI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01949___tenI
# 2: BL01591___tenI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity:     428/688 (62.2%)
# Similarity:   428/688 (62.2%)
# Gaps:         146/688 (21.2%)
# Score: 1250.0
# 
#
#=======================================

BSNT_01949___      1 GTGGAGCTTCACGCCATAACGGATGAC-AGCAAGCCGGTAGAAGAGCT--     47
                     .||.|.||.|||||.||.||.|||||| ||||..|| ||.||||||||  
BL01591___ten      1 TTGCATCTGCACGCGATCACCGATGACAAGCACTCC-GTGGAAGAGCTTT     49

BSNT_01949___     48 -AGCGAGAACCATCATTTCGATTCAGAATGAAGTTGATTTTATTCACATT     96
                      |||   ||..|||||.||||||||..|||..|||||.|||||.|||||.
BL01591___ten     50 CAGC---AAAAATCATCTCGATTCACGATGCCGTTGACTTTATCCACATC     96

BSNT_01949___     97 CGGGAACGCTCAAAA----TCGGCGGCGGATAT----TCTGAAACTGCTC    138
                     .|||||.|.||||||    |..|||  ..||||    |.|||      ||
BL01591___ten     97 AGGGAAAGGTCAAAAAAAGTAAGCG--AAATATCAAGTTTGA------TC    138

BSNT_01949___    139 GA--GCTT------ATTTTTGAAGGCGGTATAGATAAACGAAAACTGGTG    180
                     ||  ||.|      |     |||||||   |.|||||.|||||.||..|.
BL01591___ten    139 GATCGCCTGGCCGAA-----GAAGGCG---TTGATAAGCGAAAGCTCATC    180

BSNT_01949___    181 ATGAACGGGCGCGTGGATATTGCACTTT-TCTC-TACTATTCACCGCGTG    228
                     ||.||||...|.||||||||||  |||| |.|| |..|||||||||.||.
BL01591___ten    181 ATCAACGACAGGGTGGATATTG--CTTTGTTTCATCATATTCACCGGGTT    228

BSNT_01949___    229 CAGCTGC---CAAGCGGCAGCTTTTCACCG----AAGCAGGTCAG-AGCC    270
                     |||||||   ||..||   ||||||  |||    |||  .||.|| ||||
BL01591___ten    229 CAGCTGCCTTCACACG---GCTTTT--CCGTCAAAAG--TGTAAGAAGCC    271

BSNT_01949___    271 AGATTTCCACACCTTCATATCGGGAGGTCGGTGCATTCACTGGAGGAAGC    320
                      |.|||||.||..|..|.|||||.|.|||.||.|||||||..||.|||||
BL01591___ten    272 -GTTTTCCGCATTTGAAAATCGGAAAGTCCGTACATTCACCTGAAGAAGC    320

BSNT_01949___    321 GGTTCAAGCAGAAAAGGAAGACGCGGACTACGTGCTGTTCGGCCATGTGT    370
                     |||.||.||.||||..||||..||.||.|||||||||||||||||..|.|
BL01591___ten    321 GGTGCAGGCTGAAACTGAAGGTGCAGATTACGTGCTGTTCGGCCACATTT    370

BSNT_01949___    371 TTGAAACGGATTGCAAAAAGGGTCTTGAAGGCAGAGGAGTATCTTTGCT-    419
                     ||||||||||.||.||||||||.|...||||.||||||| .|||..||| 
BL01591___ten    371 TTGAAACGGACTGTAAAAAGGGCCGGAAAGGAAGAGGAG-CTCTGAGCTT    419

BSNT_01949___    420 -------GTCAACTATCAAACAGCGGATTTC--CATCCCGGTTATAGCCA    460
                            ||.||         .||||.|.||  |||.|||||.||.||.|
BL01591___ten    420 GGCAGAAGTGAA---------GGCGGCTGTCCGCATTCCGGTCATTGCGA    460

BSNT_01949___    461 TCGGGGGGATGACGCCGGACAGGTTAAGAGACGT-------AAAACAAGC    503
                     ||||.|||||.|  |||.|||         ||||       ||..|||  
BL01591___ten    461 TCGGAGGGATTA--CCGAACA---------ACGTCTGGCGGAAGTCAA--    497

BSNT_01949___    504 AGGGGCAGACGGCATCGCTGTTATGTCAGGAATTTTCTCTTCCGCTGA--    551
                     |..|||||||||||||||.||.|||||.||.|   |||.||||..|||  
BL01591___ten    498 AATGGCAGACGGCATCGCCGTGATGTCGGGGA---TCTTTTCCCATGACA    544

BSNT_01949___    552 --------------GCC------CTTGGAAGCAGCCAGACGATATTCCCG    581
                                   |||      |||       |||||       ||.||
BL01591___ten    545 GACCGAATGAGGCGGCCGCGCGGCTT-------GCCAG-------TCTCG    580

BSNT_01949___    582 C-AAGCTAAAGGAGATGCGCTATGAAAAGGCATTATGA    618
                     | |||     ||||||.| .|||||.||.||..|||||
BL01591___ten    581 CGAAG-----GGAGATTC-ATATGAGAAAGCGCTATGA    612


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