Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01949 and BL01591
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01949___tenI.1.5803.seq
# -bsequence dna-align/BL01591___tenI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01949___tenI-BL01591___tenI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01949___tenI-BL01591___tenI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01949___tenI
# 2: BL01591___tenI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity: 428/688 (62.2%)
# Similarity: 428/688 (62.2%)
# Gaps: 146/688 (21.2%)
# Score: 1250.0
#
#
#=======================================
BSNT_01949___ 1 GTGGAGCTTCACGCCATAACGGATGAC-AGCAAGCCGGTAGAAGAGCT-- 47
.||.|.||.|||||.||.||.|||||| ||||..|| ||.||||||||
BL01591___ten 1 TTGCATCTGCACGCGATCACCGATGACAAGCACTCC-GTGGAAGAGCTTT 49
BSNT_01949___ 48 -AGCGAGAACCATCATTTCGATTCAGAATGAAGTTGATTTTATTCACATT 96
||| ||..|||||.||||||||..|||..|||||.|||||.|||||.
BL01591___ten 50 CAGC---AAAAATCATCTCGATTCACGATGCCGTTGACTTTATCCACATC 96
BSNT_01949___ 97 CGGGAACGCTCAAAA----TCGGCGGCGGATAT----TCTGAAACTGCTC 138
.|||||.|.|||||| |..||| ..|||| |.||| ||
BL01591___ten 97 AGGGAAAGGTCAAAAAAAGTAAGCG--AAATATCAAGTTTGA------TC 138
BSNT_01949___ 139 GA--GCTT------ATTTTTGAAGGCGGTATAGATAAACGAAAACTGGTG 180
|| ||.| | ||||||| |.|||||.|||||.||..|.
BL01591___ten 139 GATCGCCTGGCCGAA-----GAAGGCG---TTGATAAGCGAAAGCTCATC 180
BSNT_01949___ 181 ATGAACGGGCGCGTGGATATTGCACTTT-TCTC-TACTATTCACCGCGTG 228
||.||||...|.|||||||||| |||| |.|| |..|||||||||.||.
BL01591___ten 181 ATCAACGACAGGGTGGATATTG--CTTTGTTTCATCATATTCACCGGGTT 228
BSNT_01949___ 229 CAGCTGC---CAAGCGGCAGCTTTTCACCG----AAGCAGGTCAG-AGCC 270
||||||| ||..|| |||||| ||| ||| .||.|| ||||
BL01591___ten 229 CAGCTGCCTTCACACG---GCTTTT--CCGTCAAAAG--TGTAAGAAGCC 271
BSNT_01949___ 271 AGATTTCCACACCTTCATATCGGGAGGTCGGTGCATTCACTGGAGGAAGC 320
|.|||||.||..|..|.|||||.|.|||.||.|||||||..||.|||||
BL01591___ten 272 -GTTTTCCGCATTTGAAAATCGGAAAGTCCGTACATTCACCTGAAGAAGC 320
BSNT_01949___ 321 GGTTCAAGCAGAAAAGGAAGACGCGGACTACGTGCTGTTCGGCCATGTGT 370
|||.||.||.||||..||||..||.||.|||||||||||||||||..|.|
BL01591___ten 321 GGTGCAGGCTGAAACTGAAGGTGCAGATTACGTGCTGTTCGGCCACATTT 370
BSNT_01949___ 371 TTGAAACGGATTGCAAAAAGGGTCTTGAAGGCAGAGGAGTATCTTTGCT- 419
||||||||||.||.||||||||.|...||||.||||||| .|||..|||
BL01591___ten 371 TTGAAACGGACTGTAAAAAGGGCCGGAAAGGAAGAGGAG-CTCTGAGCTT 419
BSNT_01949___ 420 -------GTCAACTATCAAACAGCGGATTTC--CATCCCGGTTATAGCCA 460
||.|| .||||.|.|| |||.|||||.||.||.|
BL01591___ten 420 GGCAGAAGTGAA---------GGCGGCTGTCCGCATTCCGGTCATTGCGA 460
BSNT_01949___ 461 TCGGGGGGATGACGCCGGACAGGTTAAGAGACGT-------AAAACAAGC 503
||||.|||||.| |||.||| |||| ||..|||
BL01591___ten 461 TCGGAGGGATTA--CCGAACA---------ACGTCTGGCGGAAGTCAA-- 497
BSNT_01949___ 504 AGGGGCAGACGGCATCGCTGTTATGTCAGGAATTTTCTCTTCCGCTGA-- 551
|..|||||||||||||||.||.|||||.||.| |||.||||..|||
BL01591___ten 498 AATGGCAGACGGCATCGCCGTGATGTCGGGGA---TCTTTTCCCATGACA 544
BSNT_01949___ 552 --------------GCC------CTTGGAAGCAGCCAGACGATATTCCCG 581
||| ||| ||||| ||.||
BL01591___ten 545 GACCGAATGAGGCGGCCGCGCGGCTT-------GCCAG-------TCTCG 580
BSNT_01949___ 582 C-AAGCTAAAGGAGATGCGCTATGAAAAGGCATTATGA 618
| ||| ||||||.| .|||||.||.||..|||||
BL01591___ten 581 CGAAG-----GGAGATTC-ATATGAGAAAGCGCTATGA 612
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